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Study of Protein Stability Synthesized in the Endoplasmic Reticulum

Research Project

Project/Area Number 16380230
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied molecular and cellular biology
Research InstitutionNara Institute of Science and Technology

Principal Investigator

KOIZUMI Nozomu  Nara Institute of Science and Technology, Graduate School of Biological Science, Associated Professor, バイオサイエンス研究科, 助教授 (20252835)

Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥11,700,000 (Direct Cost: ¥11,700,000)
Fiscal Year 2006: ¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2005: ¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2004: ¥4,100,000 (Direct Cost: ¥4,100,000)
KeywordsArabidopsis thaliana / The ER stress response / Chaperone / BiP / Transcription factor / Protein Cleavage / シロイヌナズナ / 小胞体ストレス / 糖鎖 / タンパク質フォールディング / 分泌タンパク質 / 小胞体の品質管理機構 / 転写制御 / タンパク質のフォールディング / 細胞死
Research Abstract

This study aimed to clarify the mechanism to determine the stability of protein which is synthesized in the endoplasmic reticulum. Specifically major research was conducted to understand the molecular mechanism of the-ER stress response of plants using Arabidopsis. Although initial approach that is mutant screening did not work, a bZIP type transcription factor AtbZIP60 could be isolated using genomic information of Arabidopsis. AtbZIP60 is the first transcription factor that regulated the ER stress response in plants. Regulation of AtbZIP60 is very unique. That is, AtbZIP60 protein is considered to localize to the ER membrane under non-stressed condition. When plant cells perceive the ER stress, AtbZIP60 protein is cleaved by unknown mechanism. The N-terminal region of AtbZIP60 translocates to the nucleus to in order to function as a transcription factor that activates genes that are induced upon the ER stress response. Such regulation mechanism is the first finding in plant science field and is considered to be a great contribution of this study. Next step would be clarification of cleavage mechanism of AtbZIP60 protein. Since, S1P and S2P proteases do not seem to be involved in this process, alternative proteases are considered to function. According to the results of analysis of a T-DNA insertion mutant, it is clear that AtbZIP60 regulates the expression of genes induced by the ER stress, such as AtBiP3. However, it also became clear that AtbZIP60 is not an only transcription factor regulating the ER stress response. Identification of another transcription factor would be a challenging and important future study.

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (11 results)

All 2007 2006 2005

All Journal Article (11 results)

  • [Journal Article] Glycosyl hydrolases of cell wall are induced by sugar starvation in Arabidopsis.2007

    • Author(s)
      Lee, E.J., Matsumura, Y., Soga, K., Hoson, T., Koizumi, N.
    • Journal Title

      Plant Cell Physiol. (印刷中)

    • NAID

      10018913352

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Induction of BiP by sugar independent of a cis-element for the unfolded protein response in Arabidopsis thaliana.2006

    • Author(s)
      Tajima H., Koizumi N.
    • Journal Title

      Biochem. Biophys. Res. Commun 346

      Pages: 926-930

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Induction of BiP by sugar independent of a cis-element for the unfolded protein response in Arabidopsis thaliana.2006

    • Author(s)
      Hiromi Tajima, Nozomu Koizumi
    • Journal Title

      Biochem. Biophys. Res. Commun. 346

      Pages: 926-930

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Induction of BiP by sugar independent of a cis-element for the unfolded protein response in Arabidopsis thaliana.2006

    • Author(s)
      Tajima, H., Koizumi, N
    • Journal Title

      Biochem Biophys Res Commun. 346(3)

      Pages: 926-930

    • Related Report
      2006 Annual Research Report
  • [Journal Article] An Arabidopsis transcription factor, AtbZIP60, regulates the endoplasmic reticulum stress response in a manner unique to plants.2005

    • Author(s)
      Iwata Y., Koizumi N.
    • Journal Title

      Proc. Natl. Acad. Sci. USA 102

      Pages: 5280-5285

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Unfolded protein response followed by induction of cell death in cultured tobacco cells treated with tunicamycin.2005

    • Author(s)
      Iwata Y., Koizumi N.
    • Journal Title

      Planta 20

      Pages: 804-807

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An Arabidopsis transcription factor, AtbZIP60, regulates the endoplasmic reticulum stress response in a manner unique to plants.2005

    • Author(s)
      Yuji Iwata, Nozomu Koizumi
    • Journal Title

      Proc. Natl. Acad. Sci. USA 102

      Pages: 5280-5285

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Unfolded protein response followed by induction of cell death in cultured tobacco cells treated with tunicamycin.2005

    • Author(s)
      Yuji Iwata, Nozomu Koizumi
    • Journal Title

      Planta 20

      Pages: 804-807

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 米国および韓国におけるMolecular FarmingあるいはPMP生産研究開発の現状2005

    • Author(s)
      小泉 望, 寺嶋正明
    • Journal Title

      バイオサイエンスとインダストリー 63・12

      Pages: 45-47

    • NAID

      10017085924

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Unfolded protein response followed by induction of cell death in cultured tobacco cells treated with tunicamycin2005

    • Author(s)
      Yuji Iwata, Nozomu Koizumi
    • Journal Title

      Planta 220

      Pages: 804-807

    • Related Report
      2004 Annual Research Report
  • [Journal Article] An Arabidopsis transcription factor, AtbZIP60, regulates the endoplasmic reticulum stress response in a manner unique to plants2005

    • Author(s)
      Yuji Iwata, Nozomu Koizumi
    • Journal Title

      PNAS (In press)

    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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