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Mechanism of glycoprotein sorting and transport in the cells and its application for drug design

Research Project

Project/Area Number 16390019
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biological pharmacy
Research InstitutionThe University of Tokyo

Principal Investigator

YAMAMOTO Kazuo  The University of Tokyo, Graduate School of Frontier Sciences, Professor, 大学院新領域創成科学研究科, 教授 (20174782)

Co-Investigator(Kenkyū-buntansha) MATSUMOTO Naoki  The University of Tokyo, Graduate School of Frontier Sciences, Associate Professor, 大学院新領域創成科学研究科, 助教授 (40239108)
Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥14,800,000 (Direct Cost: ¥14,800,000)
Fiscal Year 2006: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2005: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2004: ¥6,200,000 (Direct Cost: ¥6,200,000)
Keywordscargo receptor / lectin / VIP36 / ERGIC-53 / MCFD2 / pH依存性
Research Abstract

FLAG-tagged ERGIC-53 was expressed with HA-tagged VIPL or VIP36 in 293T cells and pull down assay was performed from the cell lysates. HA-VIPL and HA-VIP36 were precipitated with ERGIC-53 indicating that these proteins interact with ERGIC-53. ERGIC-53 also interacted with MCFD2 in the presence of calcium, but neither VIP36 nor VIPL did. Surface plasmon resonance (SPR) experiment demonstrated that the interaction between ERGIC-53 and MCFD2 was susceptible to calcium ions, especially the concentration between 0.1 and 0.2 mM. MCFD2 mutants derived from F5F8D patients had three or four order of magnitude lower Ka values for ERGIC-53. Ultracentrifugation analysis and SPR experiment of soluble VIP36 indicating that sugar-binding activity of VIP36 was regulated by oligomer formation dependent on pH, which explains enhancement of avidity to sugar chains. Further FLET analysis using YGFP- and EGFP-fused VIP36 showed their interactions in the cells. In contrast, sugar-binding ability of ERGIC-53 … More was enhanced by MCFD2 interactions. The interaction of ERGIC-53 with MCFD2 depends on calcium concentration. By pull-down assay with VIP36, novel protein constitutively interacted with VIP36 was identified as a chaperone BiP. The interaction had different characteristics from those of chaperone substrates. Immunoelectron microscopic analysis showed that the binding of VIP36 to BiP was occurred especially in the endoplasmic reticulum (ER). Interestingly, VIP36 precipitated with BiP had sugar chains resistant to endo H suggesting that VIP36 transported retrogradely could bind to BiP in the ER. The binding of PE-labeled soluble ERGIC-53, VIP36, and VIPL tetramers to HeLaS3 cells showed their preferable binding to high mannose-type sugar chains. Inhibition analysis by a panel of high mannose-type sugar derivatives demonstrated the precise specificities of them. VIP36 and VIPL recognize Man α 2Man α 2Man arm and glucosylation of its non-reducing terminal abrogated their binding. ERGIC-53 preferencially bound to M8b isoform, which is a product of ER α-mannosidase I, indicating that newly synthesized glycoproteins may transferred from calnexin to ERGIC-53 via VIPL. VIP36 fused with CD8 transmembrane domain followed by intracellular domain of CD3ζ was expressed in HeLaS3 cells. The cell surface display system enabled us to pick up clones of mutated VIP36 having distinct sugar-binding specificities from random mutated VIP36 libraries. Less

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (37 results)

All 2007 2006 2005 2004 Other

All Journal Article (35 results) Book (2 results)

  • [Journal Article] Detection of weak sugar binding activity of VIP36 using VIP36-streptavidin complex and membrane-based sugar chains.2007

    • Author(s)
      N.Kawasaki
    • Journal Title

      J. Biochem. 141

      Pages: 221-229

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Detection of weak sugar binding activity of VIP36 using VIP36-streptavidin complex and membrane-based sugar chains2007

    • Author(s)
      N.Kawasaki, I.Matsuo, K.Totani, D.Nawa, N.Suzuki, D.Yamaguchi, N.Matsumoto, Y.Ito, K.Yamamoto
    • Journal Title

      J.Biochem. 141

      Pages: 221-229

    • NAID

      10020101330

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Detection of weak sugar binding activity of VIP36using VIP36-streptavidin complex and membrane-based sugar chains.2007

    • Author(s)
      N.Kawasaki
    • Journal Title

      J. Biochem. 141

      Pages: 221-229

    • Related Report
      2006 Annual Research Report
  • [Journal Article] MHC class I-like MILL molecules are beta2-microglobulin-associated, GPI-anchored glycoproteins that do not require TAP for cell surface expression.2006

    • Author(s)
      M.Kajikawa
    • Journal Title

      J Immunol. 177

      Pages: 3108-3115

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Killer cell lectin-like receptor Gl binds three members of the classical cadherins to inhibit NK cell cytotoxicity.2006

    • Author(s)
      M.Ito
    • Journal Title

      J Exp. Med. 203

      Pages: 289-295

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] MHC class I-like MILL mokecules are beta2-microglobulin-associated, GPI-anchored glycoproteins that do not require TAP for cell surface expression.2006

    • Author(s)
      M.Kajikawa, B.Tomohisa, U.Tomaru, Y.Watanabe, S.Koganei, S.Kawahara, N.Matsumoto, K.Yamamoto, M.Miyazawa, k.Maenaka, A.Ishizu, M.Kasahara
    • Journal Title

      J.Immunol. 177

      Pages: 3108-3115

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Killer cell lectin-like receptor G1 binds three members of the classical cadherins to inhibit NK cell cytotoxicity.2006

    • Author(s)
      M.Ito, T.Maruyama, N.Saito, S.Koganei, K.Yamamoto, N.Matsumoto
    • Journal Title

      J.Exp.Med. 203

      Pages: 289-295

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Killer cell lectin-like receptor G1 binds three members of the classical cadherins to inhibit NK cell cytotoxicity.2006

    • Author(s)
      M.Ito
    • Journal Title

      J. Exp. Med. 203

      Pages: 289-295

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Killer cell lectin-like receptor G1 binds three members of the classical cadherins to inhibit NK cell cytotoxicity.2006

    • Author(s)
      M.Ito
    • Journal Title

      J.Exp.Med. 203

      Pages: 289-295

    • Related Report
      2005 Annual Research Report
  • [Journal Article] B-la cell origin of the murine B lymphoma line BCL1 characterized by surface markers and bacterial reactivity of its surface IgM2005

    • Author(s)
      S.Koganei
    • Journal Title

      Immunology Lett. 98

      Pages: 232-233

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Modulating the actions of NK cell-mediated xytotoxicity using lipid-PNG (n) and inhibitory recelptor-specific antagonistic peptide conjugates.2005

    • Author(s)
      C.A.Lyeyoung
    • Journal Title

      Biotechnol. Prog. 21

      Pages: 1226-1230

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Carbohydrate-binding specificity of lectins by a multiplexed particle-based flow cytometric assay2005

    • Author(s)
      K.Yamamoto
    • Journal Title

      Anal. Biochem. 336

      Pages: 28-38

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] B-1a cell origin of the murine B lymphoma line BCL1 characterized by surface markers and bacterial reactivity of its surface IgM.2005

    • Author(s)
      S.Koganei, M.Ito, K.Yamamoto, N.Matsumoto
    • Journal Title

      Immunology Lett. 98

      Pages: 232-233

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Modulating the actions of NK cell-mediated xytotoxicity using lipid-PNG (n) and inhibitory recelptor-specific antagonistic peptide conjugates.2005

    • Author(s)
      C.A.Lyeyoung, K.Tajima, K.Kato, N.Matsumoto, K.Yamamoto, T.Nagamune
    • Journal Title

      Biotechnol.Prog. 21

      Pages: 1226-1230

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Sugar-binding Properties of VIP36, an Intracellular Animal Lectin Operating as a Cargo Receptor.2005

    • Author(s)
      Y.Kamiya, Y.Yamaguchi, N.Takahashi, Y.Arata, K.Kasai, Y.Ihara, I.Matsuo, Y.Ito, K.Yamamoto, Koichi Kato
    • Journal Title

      J.Biol.Chem. 280

      Pages: 37178-37182

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Carbohydrate-binding specificity of lectins by a multiplexed particle-based flow cytometric assay.2005

    • Author(s)
      K.Yamamoto, S.Ito, F.Yasukawa, Y.Konami, N.Matsumoto
    • Journal Title

      Anal.Biochem. 336

      Pages: 28-38

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] B-la cell origin of the murine B lymphoma line BCL1 characterized by surface markers and bacterial reactivity of its surface IgM.2005

    • Author(s)
      S.Koganei
    • Journal Title

      Immunology Lett. 98

      Pages: 232-233

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Modulating the actions of NK cell-mediated xytotoxicity using lipid-PNG (n) and inhibitory recelptor-specific antagonistic peptide conjugates.2005

    • Author(s)
      C.A.Lyeyoung
    • Journal Title

      Biotechnol.Prog. 21

      Pages: 1226-1230

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Sugar-binding Properties of VIP36, an Intracellular Animal Lectin Operating as a Cargo Receptor.2005

    • Author(s)
      Y.Kamiya
    • Journal Title

      J.Biol.Chem. 280

      Pages: 37178-37182

    • Related Report
      2005 Annual Research Report
  • [Journal Article] B-la cell origin of the murine B lymphoma line BCL1 characterized by surface markers and bacterial reactivity of its surface IgM2005

    • Author(s)
      S.Koganei
    • Journal Title

      Immunology Lett. (In press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Carbohydrate-binding specificity of lectins by a multiplexed head-based flow cytometric assay2005

    • Author(s)
      K.Yamamoto
    • Journal Title

      Anal.Biochem. 336・1

      Pages: 28-38

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Coordinated metabolism of Alcadein and amyloid protein precursor regulates FE65-dependent gene transactivation2004

    • Author(s)
      Y.Araki
    • Journal Title

      J. Biol. Chem. 279

      Pages: 24343-24354

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Ribosomal protein S18 identified as a cofilin-binding protein by using phage display library2004

    • Author(s)
      K.Kusui
    • Journal Title

      Mol. Cell. Biochem 262

      Pages: 187-193

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A species-specific determinant on b2-microglobulin required for Ly49A recognition of its MHC class I ligand2004

    • Author(s)
      M.Mitsuki
    • Journal Title

      Int. Immunol. 16

      Pages: 197-204

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] The inhibitory NK cell receptor CD94/NKG2A and the activating receptor CD94/NKG2C bind the top of HLA-E through mostly shared but partly distinct sets of HLA-E residues2004

    • Author(s)
      H.Wada
    • Journal Title

      Eur. J. Immunol. 34

      Pages: 81-90

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Augmentation of NK cell-mediated cytotoxicity to tumor cells by inhibitory NK cell receptor blockers2004

    • Author(s)
      K.Tajima
    • Journal Title

      Int. Immunol. 16

      Pages: 385-393

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Coordinated metabolism of Alcadein and amyloid protein precursor regulates FE65-dependent gene transactivation.2004

    • Author(s)
      Y.Araki, N.Miyagi, N.Kato, T.Yoshida, S.Wada, M.Nishimura, H.Komano, T.Yamamoto, B.D.Strooper, K.Yamamoto, T.Suzuki
    • Journal Title

      J.Biol.Chem. 279

      Pages: 24343-24354

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Ribosomal protein S18 identified as a cofilin-binding protein by using phage display library.2004

    • Author(s)
      K.Kusui, H.Sasaki, R.Adachi, S.Matsui, K.Yamamoto, T.Yamaguchi, T.Kasahara, K.Suzuki
    • Journal Title

      Mol.Cell.Biochem. 262

      Pages: 187-193

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A species-specific determinant on b2-microglobulin required for Ly49A recognition of its MHC class I ligand.2004

    • Author(s)
      M.Mitsuki, N.Matsumoto, K.Yamamoto
    • Journal Title

      Int.Immunol. 16

      Pages: 197-204

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] The inhibitory NK cell receptor CD94/NKG2A and the activating receptor CD94/NKG2C bind the top of HLA-E through mostly shared but partly distinct sets of HLA-E residues.2004

    • Author(s)
      H.Wada, N.Matsumoto, K.Maenaka, K.Suzuki, K.Yamamoto
    • Journal Title

      Eur.J.Immunol. 34

      Pages: 81-90

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Augmentation of NK cell-mediated cytotoxicity to tumor cells by inhibitory NK cell receptor blockers2004

    • Author(s)
      K.Tajima, N.Matsumoto, K.Ohmori, H.Wada, K.Suzuki, K.Yamamoto
    • Journal Title

      Int.mmunol. 16

      Pages: 385-393

    • NAID

      10013084017

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 細胞内輸送・選別における糖鎖認識プロセス2004

    • Author(s)
      K.Yamamoto
    • Journal Title

      生化学 76・3

      Pages: 240-255

    • NAID

      10012685419

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Ribosomal protein S18 identified as a cofilin-binding protein by using phage display library2004

    • Author(s)
      K.Kusui
    • Journal Title

      Mol.Cell Biochem. 262・1

      Pages: 187-193

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Coordinated metabolism of Alcadein and amyloid protein precursor regulates FE65-dependent gene transactivation2004

    • Author(s)
      Y.Araki
    • Journal Title

      J.Biol.Chem. 279・23

      Pages: 24343-24354

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Sugar-binding Properties of VIP36, an Intracellular Animal Lectin Operating as a Cargo Receptor.

    • Author(s)
      Y.Kamiya
    • Journal Title

      J. Biol. Chem. 280

      Pages: 37178-37182

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] レクチン-歴史、構造・機能から応用まで-2006

    • Author(s)
      山本一夫
    • Total Pages
      388
    • Publisher
      シュプリンガーフェアラーク東京
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] Lectins : Histry, structures, functions, and applications.2006

    • Author(s)
      K.Yamamoto, Y.Konami
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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