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Exploring leukemogenic mechanism using genomic analysis and mouse genetics.

Research Project

Project/Area Number 16390272
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Hematology
Research InstitutionThe University of Tokyo

Principal Investigator

OGAWA Seishi  The University of Tokyo, Faculty of Medicine, Visiting Assistant Professor, 医学部附属病院, 寄附講座教員 (60292900)

Co-Investigator(Kenkyū-buntansha) CHIBA Shigeru  The University of Tokyo, Faculty of Medicine, Assistant Professor, 医学部附属病院, 助教授 (60212049)
SUZUKI Takahiro  The University of Tokyo, Faculty of Medicine, Research Associate, 医学部附属病院, 寄附講座教員 (40345210)
KUMANO Keiki  The University of Tokyo, Faculty of Medicine, Research Associate, 医学部附属病院, 研究拠点形成特任研究員 (90396721)
IZUTSU Koji  The University of Tokyo, Faculty of Medicine, Research Associate, 医学部附属病院, 助手 (30361471)
YAMAMOTO Go  The University of Tokyo, Faculty of Medicine, Medical Staff, 医学部附属病院, 医員 (70396753)
Project Period (FY) 2004 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥14,400,000 (Direct Cost: ¥14,400,000)
Fiscal Year 2005: ¥5,500,000 (Direct Cost: ¥5,500,000)
Fiscal Year 2004: ¥8,900,000 (Direct Cost: ¥8,900,000)
KeywordsLeukemia / Copy number analysis / SNP array / CNAG / Allele-specific analysis / UPD / LOH / マイクロアレイ / Blimp1 / 細胞周期 / モデルマウス / Affymetrix
Research Abstract

Leukemia is a neoplastic state in which deregulated cell division, differentiaion, and apoptosis lead to unregulated clonal proliferation of hematopoietic progenitors and the molecular basis for these abnormalities should be finally ascribed to the genetic alterations in leukemia genome. Thus the identification of those genetic changes is of crucial importance for the understanding of leukemogeneic mechanism. The purpose of this study is exploring leukemia genomes for genetic abnormalities using advanced microarray technologies, identifying their molecular targets and clarifying the leukemogenic mechanism through analysis of the target molecules using mouse genetics. In this study, we newly developed a robust system for copy number detection of cancer genome using high-density oligonucleotide microarrays (CNAG) and comprehensively analyzed copy number alterations in leukemia genomes. We analyzed a total of 886 leukemia samples and found numerous copy number abnormalities, including those that are commonly involved in multiple samples. Due to the extremely high resolution, the candidate gene that might be relevant to leukemogenesis was uniquely identified for many abnormal regions. Blimp1 is one of such target found in a homozygous deletion at 6q21 in ATL. Interestingly, conditional Blimp1 targeted mice show lymphonode swelling as well as splenomegaly. In addition, we revealed that it is mutated in primary ATL samples and when expressed in Hela cells, induces cell arrest at both G1 and G2 phases, indicating its tumor suppressive function.

Report

(3 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • Research Products

    (21 results)

All 2006 2005 2004

All Journal Article (20 results) Book (1 results)

  • [Journal Article] Genome-wide screening of DNA copy number changes in chronic myelogenous Leukemia with the use of high-resolution array-based comparative genomic hybridization.2006

    • Author(s)
      Hosoya N, Ogawa S, et al.
    • Journal Title

      Genes Chromosomes Cancer 45

      Pages: 482-494

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genome-wide screening of DNA copy number changes in chronic myelogenous leukemia with the use of high-resolution array-based comparative genomic hybridization.2006

    • Author(s)
      Hosoya N, Sanada M, Nannya Y, Nakazaki K, Wang L, Hangaishi A, Kurokawa A, Chiba S, Ogawa S.
    • Journal Title

      Genes Chromosomes Cancer 45

      Pages: 482-494

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genome-wide screening of DNA copy number changes in chronic myelogenous leukemia with the use of high-resolution array-based comparative genomic hybridization.2006

    • Author(s)
      Hosoya N, Ogawa S, et al.
    • Journal Title

      Genes Chromosomes Cancer 45

      Pages: 482-494

    • Related Report
      2005 Annual Research Report
  • [Journal Article] A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays.2005

    • Author(s)
      Nannya Y, Ogawa S, et al.
    • Journal Title

      Cancer Res. 65

      Pages: 6071-6079

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Identification of a SRC-like tyrosine kinase gene, FRK, fused with ETV6 in a patient with acute myelogenous leukemia carrying at(6;12)(q21;p13) translocation.2005

    • Author(s)
      Hosoya N, Ogawa S, et al.
    • Journal Title

      Genes Chromosomes Cancer 42

      Pages: 269-279

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mutations of the Notch1 gene in T-cell acute lymphoblastic leukemia : analysis in adults and children.2005

    • Author(s)
      Lee SY, Ogawa S, et al.
    • Journal Title

      Leukemia 19

      Pages: 1841-1843

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Functional Domains of Runx1 Are Differentially Required for CD4 Repression, TCR{beta} Expression, and CD4/8 Double-Negative to CD4/8 Double-Positive Transition in Thymocyte Development.2005

    • Author(s)
      Kawazumi M, Ogawa S, et al.
    • Journal Title

      J. Immunol. 174

      Pages: 3526-3533

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays.2005

    • Author(s)
      Nannya Y, Sanada M, Nakazaki K, Hosoya N, Wang L, Hangaishi A, Kurokawa M, Chiba S, Bailey DK, Kennedy GC, Ogagwa S.
    • Journal Title

      Cancer Res. 65

      Pages: 6071-6079

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Identification of a SRC-like tyrosine kinase gene, FRK, fused with ETV6 in a patient with acute myelogenous leukemia carrying a t(6;12)(q21;p13) translocation.2005

    • Author(s)
      Hosoya N, Qiao Y, Hangaishi A, Wang L, Nannya Y, Sanada M, Kurokawa M, Chiba S, Hirai H, Oagwa S.
    • Journal Title

      Genes Chromosomes Cancer 42

      Pages: 269-279

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mutations of the Notch1 gene in T -cell acute lymphoblastic leukemia : analysis in adults and children.2005

    • Author(s)
      Lee SY, Kumano K, Masuda S, Hangaishi A, Takita J, Nakazaki K, Kurokawa M, Hayashi Y, Ogawa S, Chiba S.
    • Journal Title

      Leukemia 19

      Pages: 1841-1843

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Functional Domains of Runx1 Are Differentially Required for CD4 Repression, TCR{beta} Expression, CD4/8 Double-Negative to CD4/8 Double-Positive Transition in Thymocyte Development.2005

    • Author(s)
      Kawazu M, Asai T, Ichikawa M, Yamamoto G, Saito T, Goyama S, Mitani K, Miyazono K, Chiba S, Ogawa S, Kurokawa M, Hirai H.
    • Journal Title

      J.Immunol. 174

      Pages: 3526-3533

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Hematopoietic stem cells expanded by fibroblast growth factor-1 are excellent targets for retrovirus-mediated gene delivery.2005

    • Author(s)
      Crcareva A, Ogawa S, et al.
    • Journal Title

      Exp.Hematol. 33

      Pages: 1459-1469

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Functional Domains of Runx1 Are Differentially Required for CD4 Repression, TCR {beta} Expression, and CD4/8 Double-Negative to CD4/8 Double-Positive Transition in Thymocyte Development.2005

    • Author(s)
      Kawazu M, Ogawa S, et al.
    • Journal Title

      J.Immunol. 174

      Pages: 3526-3533

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Identification of a SRC-like tyrosine kinase gene, FRK, fused with ETV6 in a patient with acute myelogenous leukemia carrying a t(6;12)(q21;p13) translocation.2005

    • Author(s)
      Hosoya N, Ogawa S, et al.
    • Journal Title

      Genes Chromosomes Cancer 42

      Pages: 269-279

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Runx1/AML-1 ranks as a master regulator of adult hematopoiesis.2004

    • Author(s)
      Ichikawa M, Ogawa S, et al.
    • Journal Title

      Cell Cycle 3

      Pages: 722-724

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] Runx1/AML-1 ranks as a master regulator of adult hematopoiesis.2004

    • Author(s)
      Ichikawa M, Asai T, Chiba S, Kurokawa M, Oagwa S.
    • Journal Title

      Cell Cycle 3

      Pages: 722-724

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] AML-1 is required for megakaryocytic maturation and lymphocytic differentiation, but not maintenance of hematopoietic stem cells in adult hematopoiesis.2004

    • Author(s)
      Ichikawa M, Ogawa S, et al.
    • Journal Title

      Nat.Med. 10

      Pages: 299-304

    • Related Report
      2004 Annual Research Report
  • [Journal Article] A prospective comparison of the diagnostic potential of the real-time PCR, double sandwich ELISA for galactomannan, and a (1→3)-β-D-glucan test in weekly screening for invasive aspergillosis in patients with hematological disorders.2004

    • Author(s)
      Kawazu M, Ogawa S, et al.
    • Journal Title

      J.Clin.Microbiol. 42

      Pages: 2733-2741

    • Related Report
      2004 Annual Research Report
  • [Journal Article] AML1 is functionally regulated through p300-mediated acetylation on specific lysine residues.2004

    • Author(s)
      Yamaguchi Y, Ogawa S, et al.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 15630-15638

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The transcriptionally active form of AML1 is required for hematopoietic rescue of the AML1-deficient embryonic para-aortic splanchnopleural (P-Sp) region.2004

    • Author(s)
      Goyama S, Ogawa S, et al.
    • Journal Title

      Blood 104

      Pages: 3558-3564

    • Related Report
      2004 Annual Research Report
  • [Book] Educational Program Book : Japanese Society of Hematology and Japanese Society of Clinical Hematology.2004

    • Author(s)
      Ogawa S
    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2025-11-20  

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