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STUDIES ON THE DYNAMICS OF PHOSPHOINOSITIDE PATHWAYS AND THE DEVELOPMENT OF FLUORESCENT BIOSENSORS

Research Project

Project/Area Number 16390532
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional basic dentistry
Research InstitutionHealth Sciences University of Hokkaido

Principal Investigator

TANIMURA Akihiko  Health Sciences University of Hokkaido, SCHOOL OF DENTISTRY, ASSOCIATE PROFESSOR (70217149)

Co-Investigator(Kenkyū-buntansha) TOJYO Yosuke  HEALTH SCIENCES UNIVERSITY OF HOKKAIDO, SCHOOL OF DENTISTRY, PROFESSOR (90111731)
MORITA Takao  HEALTH SCIENCES UNIVERSITY OF HOKKAIDO, SCHOOL OF DENTISTRY, ASSISTANT PROFESSOR (20326549)
NEZU Akihiro  HEALTH SCIENCES UNIVERSITY OF HOKKAIDO, SCHOOL OF DENTISTRY, ASSISTANT PROFESSOR (00305913)
東城 庸介  北海道医療大学, 歯学部, 教授 (90111749)
Project Period (FY) 2004 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥14,170,000 (Direct Cost: ¥13,900,000、Indirect Cost: ¥270,000)
Fiscal Year 2007: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2006: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 2005: ¥6,400,000 (Direct Cost: ¥6,400,000)
Fiscal Year 2004: ¥4,900,000 (Direct Cost: ¥4,900,000)
Keywordsinositol 1,4,5-trisphosphate / fluorescent resonance energy transfer / fluorescent probe / fluorescent proteins / intracellular calcium ion / screening / imaging / inositol 1,4,5-trisphosphate receptor / イノシトール三リン酸 / イノシトール三燐酸 / カルシウム / FRET / IP_3受容体 / calcium / IP3受容体
Research Abstract

LIBRA is a fluorescent biosensor for inositol 1,4,5-trisphosphate (IP_3), which is composed of the ligand-binding domain of the rat type III IP_3 receptor (IP_3R) and cyan and yellow fluorescent proteins. In the present study, we developed a series of IP_3 biosensors that exhibit strong pH stability and varying affinities for IP_3, as well as a method for the quantitative measurement of cytosolic concentrations of IP_3([IP_3]_i] in single living cells. Improved biosensors and the method for the quantitative measurement were used to elucidate IP_3dynamics during agonist-induced Ca2+ oscillations. Our result demonstrated cell type-dependent differences in IP_3dynamics; a non-fluctuating rise in [IP_3]_i and repetitive IP_3spikes during Ca^2+ oscillations in COS-7cells and HSY-EA1cells, respectively. The size of IP_3spikes in HSY-EA1cells varied from10to100nM, and the second and later spikes were initiated before the decline of [IP_3]_i to resting levels. While [IP_3]_i showed clear fluctuations at the beginning of Ca^2+ oscillations, repetitive spikes of [IP_3]_i gradually obscured during Ca^2+ oscillations. In addition, [IP_3]_i spike peaks were preceded by Ca^2+ spike peaks. These observations do not support the requirement of IP_3fluctuations in Ca^2+ oscillations.
It is also found that LIBRA and its IP_3-insensitive variant should facilitate the detection of specific agonists and antagonists of the ligand-binding site of IP_3Rs. We applied this method for the screening of novel ligand for IP_3Rs. On the basis of computational docking of the ligands to the binding domain of the type I IP_3R, we synthesis of four novel metabolically stabilized analogues of IP_3. Of these analogues, two compounds were novel IP_3 ligands using LIBRA. We further examined the subtype specificity of adenophostin derivatives using series of LIBRA with ligand-binding domains of IP_3Rs from type I, II, or III.

Report

(5 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (44 results)

All 2009 2008 2007 2006 2005 2004 Other

All Journal Article (13 results) (of which Peer Reviewed: 6 results) Presentation (30 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] The use of FRET based biosensors for the quantitative analysis of inositoll, 4, 5-trisphospate dynamics in calcium oscillations2009

    • Author(s)
      Akihiko Tanimura
    • Journal Title

      Journal of Biological Chemistry (印刷中)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The clustering of inositol1, 4, 5-trisphosphate(IP_3)receptors is triggered by IP_3 binding and facilitated by depletion of the Ca^<2+> store.2008

    • Author(s)
      Yosuke Tojyo
    • Journal Title

      Journal of Pharmacological Sciences 107

      Pages: 138-150

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The clustering of inositol 1,4,5-trisphosphate (IP_3) receptors is triggered by IP_3 binding and facilitated by depletion of the Ca^<2+> store.2008

    • Author(s)
      Yosuke Tojyo
    • Journal Title

      Journal of Pharmacological Sciences 107

      Pages: 138-150

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Synthesis and biological activity of metabolically stabilized cyclopentyl trisphosphate analogues of d-myo-Ins(l, 4, 5) P_32007

    • Author(s)
      Liuyin Zhang
    • Journal Title

      ChemMedChem 2

      Pages: 1281-1289

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Synthesis and biological activity of metabolically stabilized cyclopentyl trisphosphate analogues of d-myo-Ins(1, 4, 5)P_3.2007

    • Author(s)
      Liuyin Zhang
    • Journal Title

      ChemMedChem 2

      Pages: 1281-1289

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Synthesis and biological activity of metabolically stabilized cyclopentyl trisphosphate analogues of d-myo-Ins(1,4,5)P_32007

    • Author(s)
      L.Zhang, W.Huang, A.Tanimura, T.Morita, S.Harihar, D.B.DeWald, G.D.Prestwich
    • Journal Title

      Chem Med Chem 2

      Pages: 1281-1289

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A nobel fluorescent method employing the FRET-based biosensor“LIBRA"for the identification of ligands of the inositol1, 4, 5-trisphosphate receptors.2006

    • Author(s)
      Akihiro Nezu
    • Journal Title

      Biochimica et Biophysica Acta 1760

      Pages: 1274-1280

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A novel fluorescent method employing the FRET-based biosensor "LIBRA" for the identification of ligands of the inositol 1,4,5-trisphosphate receptors.2006

    • Author(s)
      Akihiro Nezu
    • Journal Title

      Biochimica et Biophysica Acta 1760

      Pages: 1274-1280

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] A nobel fluorescent method employing the FRET-based biosensor "LIBRA" for the identification of ligands of the inositol 1,4,5-trisphosphate receptors.2006

    • Author(s)
      Nezu, A., Tanimura, A., Morita, T, Shitara, A., Tojyo, Y.
    • Journal Title

      Biochimca et Biophysca Acta 1760

      Pages: 1274-1280

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Fluorescent biosensor for quantitative real-time measurements of inositol1, 4, 5-trisphosphate in single living cells.2004

    • Author(s)
      Akihiko Tanimura
    • Journal Title

      Journal of Biological Chemistry 279

      Pages: 38095-38098

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Fluorescent biosensor for quantitative real-time measurements of inositol 1,4,5-trisphosphate in single living cells.2004

    • Author(s)
      Akihiko Tanimura
    • Journal Title

      Journal of Biological Chemistry 279

      Pages: 38095-38098

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Fluorescent Biosensor for quantitative real-time measurements of inositol 1,4,5-trisphosphate in single living cells2004

    • Author(s)
      A.Tanimura, A, Nezu, T, Morita, R., J.Turner, Y.Tojyo
    • Journal Title

      Journal of Biological Chemistry 279

      Pages: 38095-38098

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The use of FRET based biosensors for the quantitative analysis of inositol 1,4,5-trisphospate dynamics in calcium oscillations.

    • Author(s)
      Akihiko Tanimura
    • Journal Title

      Journal of Biological Chemistry (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 蛍光バイオセンサーによるIP_3オシレーションの定量的解析2008

    • Author(s)
      谷村明彦
    • Organizer
      第50回歯科基礎医学会学術大会
    • Place of Presentation
      東京都(有明)
    • Year and Date
      2008-09-24
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] The use of fluorescent biosensors for the quantitative analysis of IP3 oscillations.2008

    • Author(s)
      Akihiko Tanimura
    • Organizer
      Japanese Association for Oral Biology 50^<th> Annual Meeting
    • Place of Presentation
      Tokyo
    • Year and Date
      2008-09-24
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Monitoring of IP_3 dynamics during Ca^<2+>oscillations with FRET-based IP_3biosensors2008

    • Author(s)
      Akihiko Tanimura
    • Organizer
      International Workshop : Advanced Nonlinear Imaging & Fluorescence-based Biosensors
    • Place of Presentation
      岡崎市
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Monitoring of IP3 dynamics during Ca^<2+> oscillations with FRET-based IP_3 biosensors.2008

    • Author(s)
      Akihiko Tanimura
    • Organizer
      International Workshop : Advanced Nonlinear Imaging & Fluorescencebased Biosensors
    • Place of Presentation
      Okazaki
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] FRET型バイオセンサーを使ったIP_3受容体リガンド化合物の解析2007

    • Author(s)
      谷村明彦
    • Organizer
      第58回日本薬理学会北部会
    • Place of Presentation
      札幌市
    • Year and Date
      2007-09-29
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] FRETバイオセンサーを使ったIP_3受容体リガンド化合物の解析2007

    • Author(s)
      谷村 明彦, 他5名
    • Organizer
      第58回日本薬理学会北部会
    • Place of Presentation
      北海道大学
    • Year and Date
      2007-09-29
    • Related Report
      2007 Annual Research Report
  • [Presentation] FRETバイオセンサーを使ったIP_3ダイナミクスの解析と薬物スクリーニング2007

    • Author(s)
      谷村 明彦, 他4名
    • Organizer
      第49回歯科基礎医学会学術大会
    • Place of Presentation
      北海道大学
    • Year and Date
      2007-08-31
    • Related Report
      2007 Annual Research Report
  • [Presentation] FRET型バイオセンサーを使ったIP_3ダイナミクスの解析と創薬研究への応用2007

    • Author(s)
      谷村明彦
    • Organizer
      第49回歯科基礎医学会学術大会
    • Place of Presentation
      札幌市
    • Year and Date
      2007-08-30
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Application of FRET-based biosensors for studying IP_3 dynamics and drug screening.2007

    • Author(s)
      Akihiko Tanimura
    • Organizer
      Japanese Association for Oral Biology 49^<th> Annual Meeting
    • Place of Presentation
      Sapporo
    • Year and Date
      2007-08-30
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Improvement of FRET-based IP_3 biosensor and monitoring of IP_3 dynamics during Ca^<2+>oscillations in different cell types2007

    • Author(s)
      Akihiko Tanimura
    • Organizer
      Gordon Research Conference on Calcium Signalling
    • Place of Presentation
      Tilton, USA
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Improvement of FRET-based IP3 biosensor and monitoring of IP3 dynamics during Ca^<2+> oscillations in different cell types.2007

    • Author(s)
      Akihiko Tanimura
    • Organizer
      2007 Gordon Research Conference on Calcium Signalling
    • Place of Presentation
      Tilton USA
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] The use of FRET-based biosensors for studying IP_3 receptor ligands.2006

    • Author(s)
      Akihiko Tanimura
    • Organizer
      The 57^<th> North Sectional Meeting of The Japanese Pharmacological Society
    • Place of Presentation
      Sapporo
    • Year and Date
      2006-09-29
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] イノシトール三リン酸分子センサー“改良型LIBRA"のpH安定性と感受性の比較2006

    • Author(s)
      谷村明彦
    • Organizer
      第57回日本薬理学会北部会
    • Place of Presentation
      弘前市
    • Year and Date
      2006-09-22
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] イノシトール三リン酸(IP_3)分子センサーのリンガーの最適化によるダイナミックレンジの改善2006

    • Author(s)
      谷村明彦
    • Organizer
      第48回歯科基礎医学会学術大会
    • Place of Presentation
      鶴見市
    • Year and Date
      2006-09-22
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Analysis of pH stability and sensitivity of inositol 1, 4, 5-trisphospate biosensor "improved LIBRA".2006

    • Author(s)
      Akihiko Tanimura
    • Organizer
      The 57^<th> North Sectional Meeting of The Japanese Pharmacological Society
    • Place of Presentation
      Hirosaki
    • Year and Date
      2006-09-14
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Engineering of the FRET-based biosensor LIBRA for the improved pH-stability and tuning affinity for inositol1, 4, 5-trisphosphate2006

    • Author(s)
      Akihiko Tanimura
    • Organizer
      FASEB Experimental Biology2006
    • Place of Presentation
      San Francisco, USA
    • Year and Date
      2006-04-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Engineering of the FRET-based biosensor LIBRA for the improved pH-stability and tuning affinity for inositol 1, 4, 5-trisphosphate2006

    • Author(s)
      Akihiko Tanimura
    • Organizer
      FASEB Experimental Biology 2006
    • Place of Presentation
      San Francisco
    • Year and Date
      2006-04-04
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] FRETプローブLIBRAのリガンド結合ドメインの改変によるIP_3親和性の調節2006

    • Author(s)
      谷村明彦
    • Organizer
      第78回日本薬理学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2006-03-10
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Engineering of ligand-binding domain of the FRET-based prove LIBRA for tuning affinity for inositol 1,4,5-trisphospate.2006

    • Author(s)
      Akihiko Tanimura
    • Organizer
      The 78^<th> Annual Meeting of The Japanese Pharmacological Society
    • Place of Presentation
      Yokohama
    • Year and Date
      2006-03-10
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] イノシトール三リン酸(IP_3)分子センサー ; 改良型LIBRAの開発2005

    • Author(s)
      谷村明彦
    • Organizer
      第56回日本薬理学会北部会
    • Place of Presentation
      新潟市
    • Year and Date
      2005-10-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] The inositol 1, 4, 5-trisphospate (IP_3) biosensors ; The development of improved variants of LIBRA.2005

    • Author(s)
      Akihiko Tanimura
    • Organizer
      The 56^<th> North Sectional Meeting of The Japanese Pharmacological Society
    • Place of Presentation
      Niigata
    • Year and Date
      2005-10-04
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] イノシトール三リン酸(IP_3)分子センサー“LIBRA"の改変による感受性と局在の制御2005

    • Author(s)
      谷村明彦
    • Organizer
      第47回歯科基礎医学会学術大会
    • Place of Presentation
      仙台市
    • Year and Date
      2005-09-29
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Development of LIBRA variants the inositol 1, 4, 5-trisphospate biosensors with the modified sensitivity and intracellular localization.2005

    • Author(s)
      Akihiko Tanimura
    • Organizer
      Japanese Association for Oral Biology 47^<th> Annual Meeting
    • Place of Presentation
      Sendai
    • Year and Date
      2005-09-29
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Improvement of the dynamic range of fluorescent indicators for inositol 1,4,5-trisphospate by the optimization of linkers.2005

    • Author(s)
      Akihiko Tanimura
    • Organizer
      Japanese Association for Oral Biology 47^<th> Annual Meeting
    • Place of Presentation
      Tsurumi
    • Year and Date
      2005-09-22
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] LIBRA"a ratiometric fluorescent biosensor for quantitative measurements of IP_3 in single living cells2005

    • Author(s)
      Akihiko Tanimura
    • Organizer
      2005Gordon Research Conference on Calcium Signalling
    • Place of Presentation
      Oxford, UK
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] LIBRA" a ratiometric fluorescent biosensor for quantitative measurements of IP_3 in single living cells.2005

    • Author(s)
      Akihiko Tanimura
    • Organizer
      2005 Gordon Research Conference on Calcium Signalling
    • Place of Presentation
      Oxford UK
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] FRET技術を駆使した最先端のシグナル伝達研究 〜セカンドメッセンジャーIP_3の分子センサー“LIBRA"の開発〜2004

    • Author(s)
      谷村明彦
    • Organizer
      第27回日本分子生物学会年会
    • Place of Presentation
      神戸市
    • Year and Date
      2004-12-09
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Development of LIBRA the fluorescent biosensor for a second messenger IP3; Advanced research for the signal transduction using FRET technology.2004

    • Author(s)
      Akihiko Tanimura
    • Organizer
      The 27^<th> Annual Meeting of the Molecular Biology Society of Japan
    • Place of Presentation
      Kobe
    • Year and Date
      2004-12-09
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 新規蛍光分子センサーLIBRAを用いたイノシトール三リン酸(TP_3)の細胞内動態の定量的解析2004

    • Author(s)
      谷村明彦
    • Organizer
      第46回歯科基礎医学会学術大会
    • Place of Presentation
      広島市
    • Year and Date
      2004-09-23
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Quantitative analysis of inositol 1, 4, 5-trisphospate dynamics using novel fluorescent biosensors.2004

    • Author(s)
      Akihiko Tanimura
    • Organizer
      Japanese Association for Oral Biology 46^<th> Annual Meeting
    • Place of Presentation
      Hiroshima
    • Year and Date
      2004-09-23
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Patent(Industrial Property Rights)] 細胞内IP_3測定用分子センサー2004

    • Inventor(s)
      谷村明彦
    • Industrial Property Rights Holder
      (独)科学技術振興機構
    • Industrial Property Number
      2004-196818
    • Filing Date
      2004-07-02
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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