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Rotavirus infection in the tropics : Toward a better understanding of the viral ecology and application to preventive strategies

Research Project

Project/Area Number 16406016
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Virology
Research InstitutionNagasaki University

Principal Investigator

NAKAGOMI Osamu  Nagasaki University, Graduate School of Biomedical Sciences, Department of Molecular Microbiology and Immunology, Professor (70143047)

Co-Investigator(Kenkyū-buntansha) NAKAGOMI Toyoko  Nagasaki University, Graduate School of Biomedical Sciences, Department of Molecular Microbiology and Immunology, Associate Professor (40155693)
有澤 孝吉  徳島大学, 大学院・ヘルスバイオサイエンス研究部, 教授 (30203384)
Project Period (FY) 2004 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥13,940,000 (Direct Cost: ¥13,100,000、Indirect Cost: ¥840,000)
Fiscal Year 2007: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2006: ¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 2005: ¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 2004: ¥4,900,000 (Direct Cost: ¥4,900,000)
KeywordsRotavirus / Serotype / Genotype / Vaccines / Tropical countries / Diarrhea / G12 / 症例の年齢分布 / 電気泳動 / 混合感染
Research Abstract

Irrespective of where one lives, one gets at least one rotavirus infection by the time one becomes 5 years of age. The infection causes devastating effects of an estimated 600,000 deaths in children mostly in developing countries. Two second-generation rotavirus vaccines are now available and licensed in more than 100 countries. There are two neutralization antigens, VP7 and VP4, on rotavirus particles and both are believed to be important in mediating immunity against rotavirus infection. Thus, surveillance of circulating rotavirus genotypes is essential in introducing rotavirus vaccines. From the perspective of global control of rotavirus diarrhea by vaccination, it is important to know the distribution of rotavirus genotypes in developing countries with special attention to an emerging genotype. This study showed unusually high detection rates, 20-49%, of G12 genotypes among rotaviruses recovered from children in Kathmandu, Nepal. To allow an easy and rapid detection of this emerging genotype, we have successfully developed an RT-PCR genotyping for G12 rotaviruses, and showed that the method worked well for wild type strains. The observed diversity in electropherotypes of G12 strains in Nepal and its association with various P types including P[8], P[6], and P[4] suggest that such previously unusual G12 strains were there in Nepal for a certain period of time and unlikely to be transient, warranting a further and continued surveillance.

Report

(5 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (12 results)

All 2007 2006

All Journal Article (9 results) (of which Peer Reviewed: 5 results) Presentation (3 results)

  • [Journal Article] Detection of G12 human rotaviruses in Nepal2007

    • Author(s)
      Pun SB
    • Journal Title

      Emerging Infectious Diseases 13

      Pages: 482-484

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Rotavirus vaccines:entering a new stage of deployment2007

    • Author(s)
      Nakagomi O
    • Journal Title

      Current Opinion in Infectious Diseases 20

      Pages: 501-507

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Detection of G12 human rotaviruses in Nepal2007

    • Author(s)
      Pun, SB
    • Journal Title

      Emerging Infectious Diseases 13

      Pages: 482-484

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Rotavirus vaccines : entering a new stage of deployment2007

    • Author(s)
      Nakagomi, O
    • Journal Title

      Current Opinion in Infectious Diseases 20

      Pages: 501-507

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Detection of G12 human rotaviruses in Nepal..2007

    • Author(s)
      Pun SB
    • Journal Title

      Emerging Infectious Diseases 13

      Pages: 482-484

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Rotavirus vaccines: entering a new stage of deployment.2007

    • Author(s)
      Nakagomi O
    • Journal Title

      Current Opinion in Infectious Diseases 20

      Pages: 501-507

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular epidemiology of rotavirus diarrhea among children and adults in Nepal:detection of G12 strains with P[6]or P[8]and a G11P[25]strain2006

    • Author(s)
      Uchida R
    • Journal Title

      Journal of Clinical Microbiology 44

      Pages: 3499-3505

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Molecular epidemiology of rotavirus diarrhea among children and adults in Nepal : detection of G12 strains with P[6] or P[8] and a G11P[25] strain.2006

    • Author(s)
      Uchida, R
    • Journal Title

      Journal of Clinical Microbiology 44

      Pages: 3499-3505

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Molecular epidemiology of rotavirus diarrhea among children and adults in Nepal : detection of G12 strains with P[6] or P[8] and a G11P[25] strain.2006

    • Author(s)
      Uchida R, Pandey BD, Sherchand JB, Ahmed K, Yokoo M, Nakagomi T, Cuevas LE, Hart CA, Nakagomi O
    • Journal Title

      Journal of Clinical Microbiology 44・10

      Pages: 3499-3505

    • Related Report
      2006 Annual Research Report
  • [Presentation] Rotavirus Diarrhea among children aged<5y in Nepal:A 2 year study(November 2005-October 2007)2007

    • Author(s)
      Nakagomi O
    • Organizer
      6th Workshop of the Members of the Asian Rotavirus Surveillance Network
    • Place of Presentation
      Bangkok,Thailand
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Rotavirus Diarrhea among children aged <5y in Nepal : A 2 year study(November 2005 - October 2007)2007

    • Author(s)
      Nakagomi, O
    • Organizer
      6th Workshop of the Members of the Asian Rotavirus Surveillance Network
    • Place of Presentation
      Bangkok, Thailand
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Rotavirus Diarrhea among children aged less than 5 years in Nepal:A 2 year study(November 2005-October 2007)2007

    • Author(s)
      Nakagomi O.
    • Organizer
      The 6th Meeting of Asian Rotavirus Surveillance Network
    • Place of Presentation
      Bangkok,Thailand
    • Related Report
      2007 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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