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Information retrieval by a neural-network system with continuous attractors

Research Project

Project/Area Number 16500190
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioinformatics/Life informatics
Research InstitutionRIKEN (2006)
富士ゼロックス株式会社研究本部 (2004-2005)

Principal Investigator

OKAMOTO Hiroshi  RIKEN Brain Science Institute, Neural Circuit Theory, 脳回路機能理論研究チーム, 客員研究員 (00374067)

Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 2006: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2005: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2004: ¥1,000,000 (Direct Cost: ¥1,000,000)
KeywordsGraded persistent activity / Continuous attractor / Decision making / Temporal integration / Brain computing / Information retrieval / Complex network / Citation / ニューロン / 力学系 / 連想記憶 / 人脈 / 脳型アルゴリズム / ネットワーク / スケールフリー / 関連文書群抽出 / 漸次的活性 / 双安定 / 概念検索 / 帯状皮質
Research Abstract

It has long been hypothesized that information retrieval in neural-network systems is described by dynamical systems with discrete fixed-point attractors. However, evidence from neurophysiological findings of graded persistent activity and computational modeling of its neural mechanisms suggests that retrieval of short-term memory from long-term memory in the brain is more likely to be described by dynamics with fixed-point attractors that continuously depend on the initial state (say, continuous-attractor dynamics). In psychology, it has been generally considered that long-term memory is archived in a network structure (e.g. semantic network). Here we propose information retrieval from a variety of real-world complex networks (WWW/internet, citation between scientific articles, human network, social network, gene/biochemical-reaction network, etc.) by continuous-attractor dynamics, by analogy with retrieval of short-term memory from a large network of long-term memory. For a given com … More plex network, a neuron with hysteretic input/output relation corresponds with each node, and a synaptic connection with each link. What a user wants to know (i.e. user's "query") is encoded in an initial state of the activation pattern of the neurons. The hysteretic characteristics assumed for each neuron are essential for producing robust continuous attractors. An activation pattern obtained as a continuous attractor represents an "answer" to the query. By applying this information-retrieval algorithm to a citation network of scientific articles (300,000 neuroscience provided Science Citation Index Expanded, Thomson Scientific, with permission), we confirmed that, in response to a given query, a set of relevant documents were adequately extracted. For instance, for a query "graded persistent activity and neural integrator", by visualizing the extracted documents and citation relations between them, one can comprehend which articles are principal or accessory and which relations between articles are mainstreams of tributaries. To elucidate whether real neurons have hysteretic characteristics such as those hypothesized in the proposed algorithm, we analyzed graded activity recorded from the monkey cingulate cortex during Go/No-go discrimination task. We found that the firing-rate distribution shows clear bimodality, which is consistent with the theoretical prediction for neurons with hysteretic characteristics. It was also demonstrated that a recurrent network of neurons with hysteretic characteristics could well replicate experimentally observed features of graded activity. These results suggest that information retrieval by the proposed algorithm is quite analogous to short-term memory retrieval from long-term memory in the brain. To our knowledge, this is the first successful example to infer non-trivial, practically useful information-processing algorithm from real brain. Less

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (20 results)

All 2007 2006 2005 2004 Other

All Journal Article (14 results) Patent(Industrial Property Rights) (6 results)

  • [Journal Article] Temporal integration by stochastic recurrent network dynamics with bimodal neurons2007

    • Author(s)
      Okamoto, H., Isomura, Y., Takada, M., Fukai, T.
    • Journal Title

      Journal of neurophysiology (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Context-dependent retrieval of information by neural-network dynamics with continuous attractors2007

    • Author(s)
      Tsuboshita, Y, Okamoto, H.
    • Journal Title

      Neural Networks (in press)

    • NAID

      10019850650

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Computation algorithms and neuronal network models underlying decision processes2006

    • Author(s)
      Sakai, Y., Okamoto, H., Fukai, T.
    • Journal Title

      Neural Networks 19

      Pages: 1091-1105

    • NAID

      10018337352

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Computation algorithms and neuronal network models underlying decision processes2006

    • Author(s)
      Sakai Y., Okamoto H., Fukai T.
    • Journal Title

      Neural networks 19

      Pages: 1091-1105

    • NAID

      10018337352

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Computation algorithms and neuronal network models underlying decision processes2006

    • Author(s)
      Sakai, Y., Okamoto, H., Fukai
    • Journal Title

      Neural Networks 19

      Pages: 1091-1091

    • NAID

      10018337352

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Information Retrieval Based on a Neural-Network System with Multi-stable Neurons2005

    • Author(s)
      Tsuboshita, Y., Okamoto, H.
    • Journal Title

      Lecture Note in Computer Science 3697

      Pages: 865-872

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Combined modeling an extracellular recording studies of up and down transitions of neurons in awake or behaving monkeys2005

    • Author(s)
      Okamoto, H., Isomura, Y., Takada, M., Fukai, T.
    • Journal Title

      Advances in Behavioral Biology 56

      Pages: 555-561

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 漸次的持続活性の神経生理学的および計算論的知見が開く連想記憶の新しい地平2005

    • Author(s)
      岡本洋, 坪下幸寛, 深井朋樹
    • Journal Title

      日本神経回路学会誌 12

    • NAID

      10017096335

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Information Retrieval Based on a Neural-Network System with Multi-stable Neurons2005

    • Author(s)
      Tsuboshita Y., Okamoto H.
    • Journal Title

      Lecture Note in Computer Science 3697

      Pages: 865-872

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Combined modeling an extracellular recording studies of up and down transitions of neurons in awake or behaving monkeys2005

    • Author(s)
      Okamoto H., Isomura Y., Takada M., Fukai T.
    • Journal Title

      Advances in Behavioral Biology 56

      Pages: 555-561

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Information Retrieval Based on a Neural-Network System with Multi-stable Neurons2005

    • Author(s)
      Tsuboshita, Y., Okamoto H.
    • Journal Title

      Lecture Note in Computer Science 3697

      Pages: 865-872

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Propagation of quasi-stable activation in a chain of recurrent neural networks2004

    • Author(s)
      Okamoto, H., Fukai, T.
    • Journal Title

      Neurocomputing 58-60

      Pages: 235-238

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Temporal integration by stochastic recurrent network dynamics with bimodal neurons

    • Author(s)
      Okamoto H., Isomura Y., Takada M., Fukai T.
    • Journal Title

      Journal of neurophysiology (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Context-dependent retrieval of information by neural-network dynamics with continuous attractors

    • Author(s)
      Tsuboshita Y., Okamoto H.
    • Journal Title

      Neural networks (in press)

    • NAID

      10019850650

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Patent(Industrial Property Rights)] データ分析装置、コンピュータの制御方法及びプログラム2006

    • Inventor(s)
      岡本 洋, 坪下 幸寛
    • Industrial Property Rights Holder
      富士ゼロックス株式会社
    • Industrial Property Number
      2006-024297
    • Filing Date
      2006-02-01
    • Related Report
      2005 Annual Research Report
  • [Patent(Industrial Property Rights)] ドキュメントデータ分析装置2006

    • Inventor(s)
      岡本 洋, 坪下 幸寛
    • Industrial Property Rights Holder
      富士ゼロックス株式会社
    • Industrial Property Number
      2006-060124
    • Filing Date
      2006-03-06
    • Related Report
      2005 Annual Research Report
  • [Patent(Industrial Property Rights)] リンク関係表示装置、リンク関係表示装置の制御方法及びプログラム2005

    • Inventor(s)
      坪下 幸寛, 岡本 洋
    • Industrial Property Rights Holder
      富士ゼロックス株式会社
    • Industrial Property Number
      2005-333039
    • Filing Date
      2005-11-17
    • Related Report
      2005 Annual Research Report
  • [Patent(Industrial Property Rights)] データ分析装置2005

    • Inventor(s)
      岡本 洋, 坪下 幸寛
    • Industrial Property Rights Holder
      富士ゼロックス株式会社
    • Industrial Property Number
      2005-044725
    • Filing Date
      2005-02-21
    • Related Report
      2004 Annual Research Report
  • [Patent(Industrial Property Rights)] データ分析装置2005

    • Inventor(s)
      坪下 幸寛, 岡本 洋
    • Industrial Property Rights Holder
      富士ゼロックス株式会社
    • Industrial Property Number
      2005-054502
    • Filing Date
      2005-02-28
    • Related Report
      2004 Annual Research Report
  • [Patent(Industrial Property Rights)] データ分析装置2004

    • Inventor(s)
      岡本 洋, 坪下 幸寛
    • Industrial Property Rights Holder
      富士ゼロックス株式会社
    • Industrial Property Number
      2004-318884
    • Filing Date
      2004-11-02
    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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