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Mobility and application for molecular breeding of transposon-like gene Revolver aimed genetic plant development

Research Project

Project/Area Number 16580004
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionTottori University

Principal Investigator

TOMITA Motonori  Tottori University, Faculty of Agriculture, Associate Professor, 農学部, 助教授 (70207611)

Project Period (FY) 2004 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2005: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2004: ¥3,100,000 (Direct Cost: ¥3,100,000)
Keywordstransposon / Revolver / evolution / ecological stress / hybridization / mobility / SSAP / molecular marker / 生態系 / SSAP(配列特異的増幅産物多型) / トランスポゾン様遺伝子 / ストレス / 多様な生態系 / スロットブロット解析 / コピー数 / 量的変異 / 温暖湿潤な気候
Research Abstract

Revolver is a new class of transposon-like gene (US-2005-0091710) discovered in the Triticeae genome. Revolver encompassing 3041 bp has 20 bp of terminal inverted repeated sequence on the both ends, which features a class II transposable element. Revolver is transcriptionally active and its cDNA clone (726 bp) contains a single ORF encoding 118 amino acid residues of protein, which shows similarity with transcriptional regulators with DNA binding ability. The entire structure of Revolver dose not share identity with both the class I and class II transposable elements ever found. Southern blot analysis on the Triticeae plants shows that Revolver is abundant in the genomes of some wheat relatives, Secale (RR), Dasypyrum (VV), as well as wheat ancestor species, Triticum monococcum (AA), T.turgidum (AABB) and T.tauschii (DD). However, Revolver is rare in the genome of bread wheat T.aestivum (AABBDD). These facts indicate that Revolver has been existed since the diploid progenitor of wheat, then it has been disappearing in bread wheat through the evolution. Quantity of Revolver in wild emmer wheat Triticum dicoccoides, which is the tetraploid progenitor of bread wheat, was examined in 17 populations (209 genotypes) representing a wide range of ecological conditions of soil, temperature and water availability in Israel. Noticeable quantitative differences in copy numbers of Revolver was observed among the populations. T.dicoccoides in the population of Yehudiyya, Ammaid, Tabigha and Mt.Gerizim, where humid and temperate, had the highest number of copies (20,000) per haploid genome and that in the population of Kokhav-Hashahar, J'aba, Amirim, Beito-Oren, Bat-Shelomo, where seasonal hot and dry wind occurs over 85 days per year, had the lowest number (50 to 100). This extensive quantitative diversity among the locations suggests mobilization of Revolver by ecological stresses.

Report

(3 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • Research Products

    (10 results)

All 2006 2005 2004

All Journal Article (6 results) Book (3 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Quantitative variance of a transposon-like gene Revolver in wild emmer wheat of Israel2005

    • Author(s)
      M.Tomita, T.Noguchi, N.Itatsu, E.Nevo
    • Journal Title

      Proceedings of 10 th International Congress of SABRAO 10

      Pages: 35-36

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] ムギ類ゲノムで増減する新規のトランスポソン様遺伝子Revolver2005

    • Author(s)
      富田因則, 野口達郎, E. Nevo
    • Journal Title

      第28回日本分子生物学会年会WIJレトロトランスポソンに由来するゲノム機能の新展開 28

      Pages: 53-53

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Quantitative variance of a transposon-like gene Revolver in wild emmer wheat of Israel.2005

    • Author(s)
      Tomita, M., E.Nevo et al.
    • Journal Title

      Proceedings of 10th International Congress of the Society of the Advancement of Breeding Researches in Asia and Oceania

      Pages: 35-36

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A new class of transposon-like gene Revolver showing quantitative variance in the Triticeae genome.2005

    • Author(s)
      Tomita, M., E.Nevo et al.
    • Journal Title

      The genome where retrotransposon meets its new function. 28th Annual Meeting of the Molecular Biology Society of Japan, Fukuoka

      Pages: 53-53

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] ムギ類ゲノムで増減する新規のトランスポゾン様遺伝子Revolver2005

    • Author(s)
      富田因則, 野口達郎, E.Nevo
    • Journal Title

      第28回日本分子生物学会年会W1Jレトロトランスポゾンに由来するゲノム機能の新展開 28

      Pages: 53-53

    • Related Report
      2005 Annual Research Report
  • [Journal Article] ESTにみられる新規トランスポゾンRevolver様因子2004

    • Author(s)
      富田因則
    • Journal Title

      育種学研究 6(別冊2)

      Pages: 116-116

    • Related Report
      2004 Annual Research Report
  • [Book] 反復DNAのクローニング法"クロモソーム植物染色体研究の方法"2006

    • Author(s)
      富田因則
    • Total Pages
      274
    • Publisher
      養賢堂
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Book] Cloning method of repetitive DNA. Chromosome-Plant chromosome research-2006

    • Author(s)
      Tomita, M.
    • Publisher
      Yokendo, Tokyo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] 反復DNAのクローニング法. クロモソーム-植物染色体研究の方法-(福井希一編)2005

    • Author(s)
      富田因則
    • Total Pages
      260
    • Publisher
      養賢堂
    • Related Report
      2004 Annual Research Report
  • [Patent(Industrial Property Rights)] A novel transposon-like element2004

    • Inventor(s)
      Motonori Tomita
    • Industrial Property Rights Holder
      鳥取大学学長
    • Filing Date
      2004-08-27
    • Related Report
      2004 Annual Research Report

URL: 

Published: 2004-04-01   Modified: 2016-04-21  

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