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Regulatory mechanism of genes involved in chitin degradation system of bacteria

Research Project

Project/Area Number 16580066
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionOsaka University of Pharmaceutical Sciences

Principal Investigator

TSUJIBO Hiroshi  Osaka University of Pharmaceutical Sciences, Department of Microbiology, Professor, 薬学部, 教授 (90175464)

Project Period (FY) 2004 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2005: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 2004: ¥1,900,000 (Direct Cost: ¥1,900,000)
Keywordsmarine bacteria / actinomycete / chitin / chitin degradation / chitinase / gene regulation
Research Abstract

We found that four chitinases (ChiA, ChiB, ChiC, and ChiD), three β-N-acetylglucosaminidases (GlcNAcases A, B, and C), a transglycosylative enzyme (Hex99), a chitin-binding protein (Cbp1), a serine protease (AprIV) and a metalloprotease (MprIII) were involved in chitin degradation system of Pseudoalteromonas sp. strain O-7. AprIV and chitinases were induced in the presence of N-acetylglucosamine (GlcNAc). These results suggest that AprIV and chitinases might be coordinately controlled by the same regulatory system. Recently, we have found that ArcA, which is a response regulator of ArcB/ArcA two-component signal transduction system, binds to the upstream region of aprIV gene. The arcA and arcB genes were cloned and expressed in Escherichia coli. The ArcA protein as a response regulator was transphosphorylated by the ArcB protein as a sensor kinase. The ArcA protein was also phosphorylated by acetylphosphate which is an indicator of nutritive conditions of cells. Transphosphorylation fr … More om ArcB to ArcA was promoted by GlcNAc which is a component of chitin. Generally ArcA-ArcB is a two-component signal transduction system which facilitates adaptation to anoxia. However, our research indicated that ArcA plays an important role even in aerated conditions. Gel retardation assay and BIAcore analysis demonstrated that phosphorylated ArcA (ArcA-P) more tightly bound to the upstream region of aprIV and chiD genes compared to those of chiA, chiB, chiC, and cpb1 genes. Furthermore, footprint analyses indicate that ArcA-P binds to the consensus sequence, 5'-ACAATTAGANNNNNACTAAAACA-3'. The consensus sequence was found near the promoter region of each gene. These results suggest that ArcB/ArcA two-component signal transduction system negatively regulates the expression of genes involved in chitin degradation system of the strain.
On the other hand, Streptomyces thermoviolaceus OPC-520 produced four chitinases (Chi40, Chi35, Chi30, Chi25) in the presence of chitin. These genes contain a common similar pair of direct repeat sequences in the promoter regions, which have been suggested to be involved in both chitin induction and glucose repression. We found that regulatory gene involved in induction existed in the upstream region of genes encoding chitobiose transporter. We are doing the cloning and expression of the regulatory gene to examine whether the gene product binds to the direct repeat sequences of chitinase genes. Less

Report

(3 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • Research Products

    (6 results)

All 2005

All Journal Article (6 results)

  • [Journal Article] Roles of four chitinases (ChiA, ChiB, ChiC, and ChiD) in the chitin degradation system of marine bacterium Alteromonas sp. strain 0-7.2005

    • Author(s)
      辻坊 裕
    • Journal Title

      Applied and Environmental Microbiology 71・4

      Pages: 1811-1815

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Role of the N-terminal polycystic kidney disease domain in chitin degradation by chitinase A from a marine bacterium, Alteromonas sp. strain 0-7.2005

    • Author(s)
      辻坊 裕
    • Journal Title

      Journal of Applied Microbiology 99・3

      Pages: 551-557

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Roles of four chitinases (chiA, chiB, chiC, and chiD) in the chitin degradation system of marine bacterium Alteromonas sp. strain O-7.2005

    • Author(s)
      Hiroshi Tsujibo, et al.
    • Journal Title

      Applied and Environmental Microbiology 71(4)

      Pages: 1811-1815

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Role of the N-terminal polycystic kidney disease domain in chitin degradation by chitinase A from a marine bacterium, Alteromonas sp. strain O-7.2005

    • Author(s)
      Hiroshi Tsujibo, et al.
    • Journal Title

      Journal of Applied Microbiology 99(3)

      Pages: 551-557

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Roles of four chitinases (ChiA, ChiB, ChiC, and ChiD) in the chitin degradation system of marine bacterium Alteromonas sp. strain 0-7.2005

    • Author(s)
      辻坊 裕
    • Journal Title

      Applied and Environmental microbiology 71・4

      Pages: 1811-1815

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Roles of four chitinases (ChiA, ChiB, ChiC, and ChiD) in the chitin degradation system of marine bacterium Alteromonas sp.strain O-7.2005

    • Author(s)
      辻坊 裕
    • Journal Title

      Applied and Environmental Microbiology 71・4

      Pages: 1811-1815

    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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