Proteomics research for plant self defense proteins
| Project/Area Number |
16580080
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| Research Category |
Grant-in-Aid for Scientific Research (C)
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| Allocation Type | Single-year Grants |
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| Section | 一般 |
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| Research Field |
Applied biochemistry
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| Research Institution | Kyushu Tokai University |
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Principal Investigator |
ARAKI Tomohiro Kyushu Tokai Univ., Sch.of Agric, Prof., 農学部, 教授 (20193071)
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| Project Period (FY) |
2004 – 2006
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| Project Status |
Completed (Fiscal Year 2006)
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| Budget Amount *help |
¥1,900,000 (Direct Cost: ¥1,900,000)
Fiscal Year 2006: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2005: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2004: ¥500,000 (Direct Cost: ¥500,000)
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| Keywords | chitinase / proteome / self defense / mass spectrometry / zymography |
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| Research Abstract |
To investigate the proteome analysis and inherent self defense proteins, the inducible self defense proteins were subjected to proteomic analysis. The method for 2D electrophoresis of plant tissue extract, in-gel digestion, and mass spectrometry were established and applied to the detection of chitinase induced by stress followed by identification of the proteins using mass spectrometry. The zymographic procedure was also developed for plant chitinase and analyzed by mass spectrometry using optimized method.
The hydroponic cultured ruzigrass under Al stress was analyzed its inducible proteins on 2D electrophoresis. The detected protein spot was analyzed on mass spectrometry after in-gel digestion of the protein using established protocol. The protein was identified as class 1 chitinase family, however, carried higher molecular weight than normal class 1 chitinase. This suggests that the detected induced chitinase was newly found class 1 type chitinase that carried multiple chitin binding domains. The extract of ruzigrass roots was then applied on to an affinity column using Chitipearl and separated adsorbed chitinase fractions.
To elucidate the identification of inducible chitinase during infection or wounding, yam aerial tuber infected by fungi and wounded by insects were subjected zymographic analysis of substrate gel SDS electrophoresis. The results indicate that the chitinase apparently induced by fungal infection and wounding.
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Report
(4 results)
Research Products
(11 results)
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[Journal Article] New variant of quail egg white lysozyme identified by peptide mapping.2007
Author(s)
Thammasirirak, S., Preecharram, S., Ponkham, P., Daduang, S., Araki, T., Svasti, J.
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Journal Title
Comp.Biochem.Physiol. (In press)
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[Journal Article] Analysis of chitinases induced in acid tolerant plant under metal stress condition by two-dimensional electrophoresis.2005
Author(s)
Araki, T., Masaoka, Y., Matsui, K., Saito, A., Shigetome, R., Torikata, T.
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Journal Title
Chitin and Chitisan Res. 11
Pages: 126-127
NAID
Description
「研究成果報告書概要(欧文)」より
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