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Molecular breeding of white rot basidiomycete for efficient saccharification in biomass conversion process

Research Project

Project/Area Number 16580133
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 林産科学・木質工学
Research InstitutionKyoto University

Principal Investigator

HONDA Yoichi  Kyoto University, RISE, Associate Professor (70252517)

Project Period (FY) 2004 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,980,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥180,000)
Fiscal Year 2007: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2006: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2005: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2004: ¥1,800,000 (Direct Cost: ¥1,800,000)
Keywordsbiomass conversion / white rot fungi / genetic engineering / transformation / host-vector system / basidiomycete / mushroom / cloning
Research Abstract

A versatile peroxidase MnP2, secreted by a white rot fungus Pleurotus ostreatus was characterized for its unique property of high molecular weight compounds oxidizing activity. A series of mutant MnP2 were produced by P. ostreatus transformants containing a recombinant mnp2 with site-directed base substitutions. Each mutant protein was purified to homogeneity and characterized with kinetics and reactivity for low- and high-molecular weight substrates, and spectroscopic methods. All variants assayed in this work showed substantially similar kinetic properties for Mn^<2+> and H_2O_2 to those of wild type MnP2. On the other hand, it was demonstrated that substitution of an exposing tryptophan residue (W170) to alanine lost oxidation activity for veratrylacohol (VA), Poly R-478 and Rnase A. Furthermore, substitution of the surrounding amino add residues affected oxidation of the high-molecular weight compounds but VA. From these results, it was clearly demonstrated that MnP2 oxidizes high-molecular weight compounds directly via long range electron transfer pathway from W170 to heme moiety. An extra modification of carbohydrate drain in a mutant MnP2 was also discussed. This is the first report of mutational analysis of fungal versatile peroxidase produced by a homologous expression system.
For the development of a gene-targeting system in basidiomycete, a gene encoding for Ku70 protein which is involved in non-homologous end joining system was cloned and analyzed.

Report

(5 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (35 results)

All 2008 2007 2006 2005 2004

All Journal Article (13 results) (of which Peer Reviewed: 3 results) Presentation (20 results) Book (2 results)

  • [Journal Article] Mechanism for oxidation of high-molecular-weight substrates by a fungal versatile peroxidase, MnP22008

    • Author(s)
      Tsukihara, T., Y. Honda, R. Sakai, T. Watanabe, T. Watanabe
    • Journal Title

      Appl. Environ. Microbiol. 74(in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Mechanism for oxidation of high-molecular-weight substrates by a fungal versatile peroxidase, MnP22008

    • Author(s)
      Tsukihara, T., Y., Honda, R., Sakai, T., Watanabe, T., Watanabe
    • Journal Title

      Appl. Environ. Microbiol 74

      Pages: 2873-2881

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Molecular breeding of white rot fungus, Pleurotus ostreatus, by homologous expression of its versatile peroxidase MnP22006

    • Author(s)
      Tsukihara, T., Y. Honda, T. Watanabe and T. Watanabe
    • Journal Title

      Appl. Microbiol. Biotechnol 71(1)

      Pages: 114-120

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Exclusive overproduction of recombinant versatile peroxidase MnP2 by genetically modified white rot fungus, Pleurotus ostreatus.2006

    • Author(s)
      Tsukihara, T., Y. Honda, R. Sakai, T. Watanabe, T. Watanabe
    • Journal Title

      J. Biotechnol. 126

      Pages: 431-439

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Exclusive overproduction of recombinant versatile peroxidase MnP2 by genetically modified white rot fungus, Pleurotus ostreatus2006

    • Author(s)
      Tsukihara, T., Y., Honda, R., Sakai, T., Watanabe, T., Watanabe
    • Journal Title

      J. Biotechnol 126

      Pages: 431-439

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Exclusive overproduction of recombinant versatile peroxidase MnP2 by genetically modified white rot fungus, Pleurotus ostreatus.2006

    • Author(s)
      Tsukihara, T., Y.Honda, R.Sakai, T.Watanabe, T.Watanabe
    • Journal Title

      J. Biotechnol. 126

      Pages: 431-439

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Molecular breeding of white rot fungus, Pleurotus ostreatus, by homologous expression of its versatile peroxidase MnP22005

    • Author(s)
      Tsukihara, T., Y., Honda, T., Watanabe, T., Watanabe
    • Journal Title

      Appl. Microbiol. Biotechnol 71

      Pages: 114-120

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Molecular breeding of white rot fungus, Pleurotus ostreatus, by homologous expression of its versatile peroxidase MnP22005

    • Author(s)
      Tsukihara, T., Y.Honda, T.Watanabe, T.Watanabe
    • Journal Title

      Appl.Microbiol.Biotechnol. (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Mn(2+) is dispensable for the production of active MnP2 by PPleurotus ostreatus2005

    • Author(s)
      H.Kamitsuji, Y.Honda, T.Watanabe, M.Kuwahara
    • Journal Title

      Biochem Biophys Res Commun. 327

      Pages: 871-816

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Introduction to Mushroom Science2004

    • Author(s)
      Honda, Y
    • Journal Title

      Kaiseisya Press, Ohtsu

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Microbial scission of sulfide linkages in vulcanized natural rubber by a white rot basidiomycete, Ceriporiopsis subvermispora2004

    • Author(s)
      S.Sato, Y.Honda, M.Kuwahara, H.Kishimoto, N.Yagi, K.Muraoka, T.Watanabe
    • Journal Title

      Biomacromolecules 5

      Pages: 311-313

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Production and Induction of Manganese Peroxidase Isozymes in a White-rot Fungus Pleurotus ostreatus2004

    • Author(s)
      H.Kamitsuji, Y.Honda, T.Watanabe, M.Kuwahara
    • Journal Title

      Appl.Microbiol.Biotechnol 65

      Pages: 287-294

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Direct oxidation of polymeric substrates by multifunctional manganese peroxidase isozyme from Pleurotus ostreatus without redox mediators2004

    • Author(s)
      H.Kamitsuji, Y.Honda, T.Watanabe, M.Kuwahara
    • Journal Title

      Biochem.J. 386

      Pages: 387-393

    • Related Report
      2004 Annual Research Report
  • [Presentation] Analysis of ku70, a gene related to non-homologous end joining in Pleurotus ostreatus2007

    • Author(s)
      Honda, Y., Y., Yano, T., Watanabe, T., Watanabe
    • Organizer
      The 11th Annual meeting of Japanese Society of Mushroom Science and Biotechnology
    • Place of Presentation
      Asahikawa
    • Year and Date
      2007-09-19
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ヒラタケの非相同末端結合関連遺伝子ku70の解析2007

    • Author(s)
      本田与一、矢野陽一郎、高橋理、渡邊崇人、渡辺隆司
    • Organizer
      日本きのこ学会 第11回大会
    • Place of Presentation
      旭川市
    • Year and Date
      2007-09-19
    • Related Report
      2007 Annual Research Report
  • [Presentation] 白色腐朽菌ヒラタケの非相同末端結合関連遺伝子ku70のクローニング2007

    • Author(s)
      矢野陽一郎、本田与一、渡邊崇人、渡辺隆司
    • Organizer
      第57回日本木材学会大会
    • Place of Presentation
      広島市
    • Year and Date
      2007-08-10
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Mutational analysis of oxidation site in Pleurotus ostreatus versatile peroxidase, MnP22007

    • Author(s)
      Tsukihara, T., Y. Honda, T. Watanabe and T. Watanabe
    • Organizer
      The 10th International Congress on Biotechnology in the Pulp and Paper Industry
    • Place of Presentation
      広島市
    • Year and Date
      2007-06-13
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Mutational analysis of oxidation site in Pleurotus ostreatus versatile peroxidase, MnP22007

    • Author(s)
      Tsukihara, T., Y., Honda, T., Watanabe, T., Watanabe
    • Organizer
      The 10th International Congress on Biotechnology in the Pulp and Paper Industry
    • Place of Presentation
      Madison, USA
    • Year and Date
      2007-06-13
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 担子菌Pleurotus ostreatus多機能型ペルオキシダーゼMnP2における高分子基質酸化機構の解明2007

    • Author(s)
      月原多佳久, 坂井亮太, 渡邊崇人, 本田与一, 渡辺隆司
    • Organizer
      日本農芸化学会大会
    • Place of Presentation
      東京
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Mechanism for oxidation of high-molecular-weight substrates by a fungal versatile peroxidase, MnP22007

    • Author(s)
      Tsukihara, T., R., Sakai, T., Watanabe, Y., Honda, T., Watanabe
    • Organizer
      Annual meeting of Japan Society of Bioscience, Biochemistry and Agrochemistry 2007
    • Place of Presentation
      Tokyo
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Homologous expression of versatile peroxidase, MnP2, in Pleurotus ostreatus2006

    • Author(s)
      Tsukihara, T., Y. Honda, T. Watanabe and T. Watanabe
    • Organizer
      International Symposium on Mushroom Science
    • Place of Presentation
      Akita
    • Year and Date
      2006-09-22
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Homologous expression of versatile peroxidase, MnP2. in Pleurotus ostreatus2006

    • Author(s)
      Tsukihara, T., Y., Honda, T., Watanabe, T., Watanabe
    • Organizer
      International Symposium on Mushroom Science
    • Place of Presentation
      Akita
    • Year and Date
      2006-09-22
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 多機能型ペルオキシダーゼMnP2の部位特異的変異体によるPoly R-478の脱色2006

    • Author(s)
      月原多佳久, 本田与一, 渡邊崇人, 渡辺隆司
    • Organizer
      第56回日本木材学会大会
    • Place of Presentation
      秋田市
    • Year and Date
      2006-08-10
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Decolorization of Poly R-478 by versatile peroxidase MnP2 with site-directed amino-acid substitutions2006

    • Author(s)
      Tsukihara, T., Y., Honda, T., Watanabe, T., Watanabe
    • Organizer
      The 56th Annual Meeting of Japan Wood Research Society
    • Place of Presentation
      Akita
    • Year and Date
      2006-08-10
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Cloning of ku70, a gene related to non-homologous end joining in a white rot fungus, Pleurotus ostreatus2006

    • Author(s)
      Yano, Y., Y., Honda, T., Watanabe, T., Watanabe
    • Organizer
      The 57th Annual Meeting of Japan Wood Research Society
    • Place of Presentation
      Hiroshima
    • Year and Date
      2006-08-10
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ヒラタケにおける組換え多機能型ペルオキシダーゼ(MnP2)の高発現2006

    • Author(s)
      月原多佳久, 本田与一, 坂井亮太, 渡邊崇人, 渡辺隆司
    • Organizer
      日本菌学会50周年記念大会
    • Place of Presentation
      千葉市
    • Year and Date
      2006-06-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Pleurotus ostreatus(ヒラタケ)における一過性形質転換系2006

    • Author(s)
      本田与一, 酒徳尚史, 渡邊崇人, 渡辺隆司
    • Organizer
      日本菌学会50周年記念大会
    • Place of Presentation
      千葉市
    • Year and Date
      2006-06-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Exclusive overproduction of recombinant versatile peroxidase MnP2 in, Pleurotus ostreatus2006

    • Author(s)
      Tsukihara, T., Y., Honda, R., Sakai, T., Watanabe, T., Watanabe
    • Organizer
      The 50th anniversary meeting of The Mycological Society of Japan
    • Place of Presentation
      Chiba
    • Year and Date
      2006-06-04
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Transient gene expression in Pleurotus ostreatus2006

    • Author(s)
      Honda, Y., N., Sakatoku, T., Watanabe, T., Watanabe
    • Organizer
      The 50th anniversary meeting of The Mycological Society of Japan
    • Place of Presentation
      Chiba
    • Year and Date
      2006-06-04
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Exclusive overproduction of recombinant versatile peroxidase MnP2 in, Pleurotus ostreatus.2005

    • Author(s)
      Tsukihara, T., Y. Honda, T. Watanabe and T. Watanabe
    • Organizer
      MSA/MSJ joint meeting 2005
    • Place of Presentation
      Hilo
    • Year and Date
      2005-08-03
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 白色腐朽菌Pleurotus ostreatusにおける組換えMnP2の発現2005

    • Author(s)
      月原多佳久, 本田与一, 渡邊崇人, 渡辺隆司
    • Organizer
      第55回日本木材学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2005-03-18
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Expression of the recombinant MnP2 in Pleurotus ostreatus2005

    • Author(s)
      Tsukihara, T., Y., Honda, T., Watanabe, T., Watanabe
    • Organizer
      The 55th Annual Meeting of Japan Wood Research Society
    • Place of Presentation
      Kyoto
    • Year and Date
      2005-03-18
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Overproduction of versatile peroxidase MnP2 by genetically-modified Pleurotus ostreatus2005

    • Author(s)
      Tsukihara, T., Y., Honda, T., Watanabe, T., Watanabe
    • Organizer
      MSA/MSJ joint meeting
    • Place of Presentation
      Hilo, USA
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] きのこ学への誘い2004

    • Author(s)
      本田与一, 他(大賀祥治編)
    • Total Pages
      189
    • Publisher
      海青社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] きのこ学への誘い2004

    • Author(s)
      本田与一他(大賀祥治編)
    • Total Pages
      189
    • Publisher
      海青社
    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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