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Development of High Efficiency Transformation System Using Retrotransposon in Basidiomyceteous Fungi

Research Project

Project/Area Number 16580278
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied molecular and cellular biology
Research InstitutionTokyo Institute of Technology

Principal Investigator

SHISHIDO Kazuo  Tokyo Institute of Technology, Life Science, Professor, 大学院・生命理工学研究科, 教授 (40087549)

Co-Investigator(Kenkyū-buntansha) YAMAZAKI Takashi  Institute of Space and Astronautical Science, Japan Aerospace Exploration Agency, Invited Researcher, 宇宙科学研究本部, 招聘研究員 (70301174)
Project Period (FY) 2004 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2005: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2004: ¥2,300,000 (Direct Cost: ¥2,300,000)
Keywordsbasidiomycete / LTR-type retrotransposon / direct repeat / TATA box / promoter activity / transformation / chromosome-integrating vector / 同方向繰返し配列 / 染色体挿入型ベクター
Research Abstract

To understand an unique biological phenomenon of basidiomycete fungi and produce basidiomycete strains useful for recycle of plant biomass resource and preservation of environment., it is necessary to develop the system of high efficiency gene introduction and expression. By using this system, we can easily select the desired strain. We used LTR (long terminal repeat) of retrotransposon Le.RTn1 isolated from Lentinula edodes chromosome as a promoter element from the following reason : Le.RTn1 (6,213 bp) contained two internal overlapping open reading frames (ORFs) putatively encoding GAG (group-specific antigens), and PRO (protease) plus POL (reverse transcriptase, RNase H, and integrase). The LTR (474 bp) contained four consecutive eukaryotic promoter consensus TATA(like)-boxes, and three relatively long direct repeats that are present upstream, within or downstream of the TATA(like)-boxes. We cloned the L.edodes cDNA (641 bp) encoding a cytochrome P450 heme-binding domain (SHP1 : small heme-binding protein 1), to 5' end of which the part of the LTR sequence is fused. The 5' end (corresponding to the transcription start point) of the cloned cDNA was mapped to the position just downstream of the most downstream TATA box. L.edodes mycelial cells contained a large amount of shp1 transcript. These evidences show a strong promoter activity of the LTR. We constructed the chromosome-integrating recombinant plasmid containing the expression cassette of the LTR promoter-hygromycin-resistant gene-L.edodes priA terminator and introduced it into basidiomycete Coriolus hirsutus. The hygromycin-resistant colonies were obtained with a high frequency.

Report

(3 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • Research Products

    (15 results)

All 2006 2005 2004

All Journal Article (14 results) Book (1 results)

  • [Journal Article] A Long terminal repeat (LTR) retrotransposon Le.RTn1 of the basidiomycetous mushroom Lentinula edodes.2006

    • Author(s)
      Shishido, Sato, Nobusaka, Akiyama, Kaneko, Ninomiya, Katsukawa
    • Journal Title

      Abstract of 8^<th> European Conference on Fungal Genetics (April 8-11, Vienna, Austria) (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Isolation and characterization of long terminal repeat (LTR) retrotransposon Le.RTn1 of the basidiomycete Lentinula edodes2006

    • Author(s)
      Shishido, Sato, Nobusaka, Akiyama, Kaneko, Ninomiya, Katsukawa, Miyazaki
    • Journal Title

      第50回日本菌学会講演要旨集 (印刷中)

    • NAID

      130007005078

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 担子菌シイタケのLTR型レトロトランスポゾンLe.RTn1のシイタケ染色体上における分散性2006

    • Author(s)
      信坂龍, 勝川志穂, 宍戸和夫
    • Journal Title

      日本農芸化学会2006年度大会講演要旨集

      Pages: 121-121

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] 担子菌シイタケのレトロトランスポゾンLe.RTn1由来LTRのプロモーター活性2006

    • Author(s)
      二宮源紀, 宍戸和夫
    • Journal Title

      平成17年度 東京工業大学生命科学科 分子生命コース・生体機構コース学士論文発表会講演要旨

      Pages: 17-17

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] 担子菌シイタケのLTR型レトロトランスポゾンLe.RTn1の関する研究2006

    • Author(s)
      信坂龍, 宍戸和夫
    • Journal Title

      平成17年度 東京工業大学院生命理工学研究科 分子生命科学専攻 修士論文発表会講演要旨

      Pages: 39-39

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A Long terminal repeat (LTR) retrotransposon Le.RTn1 of the Basidiomycetous mushroom Lentinula edodes.2006

    • Author(s)
      K.Shishido, Y.Sato, R.Nobusaka, R.Akiyama, S.Kaneko, M.Ninomiya, S.Katsukawa
    • Journal Title

      Book of Abstracts of 8^<th> European Conference on FungalGenetics (April 8-11, Vienna, Austria)

      Pages: 55-55

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Isolation and characterization of long terminal repeat (LTR) retrotransposon Le.RTn1 of the basidiomycetous Lentinula edodes.2006

    • Author(s)
      K.Shishido, Y.Sato, R.Nobusaka, R.Akiyama, S.Kaneko, M.Ninomiya, S.Katsukawa, Y.Miyazaki
    • Journal Title

      Abstracts of Papers presented at the 50^<th> Anniversary Meeting of the Mycological Society of Japan (June 3-4, 2006, Chiba)

      Pages: 103-103

    • NAID

      130007005078

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Diversity of LTR-type retrotransposon Le.RTn1 on Lentinula edodes chromosomes.2006

    • Author(s)
      R.Nobusaka, S.Katsukawa, K.Shishido
    • Journal Title

      Abstracts of 2006 Annual Meeting of Japan Society for Bioscience, Biotechnology, and Agrochemistry (March 26-28, Kyoto)

      Pages: 121-121

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Promoter activity of the LTR derived from Lentinula edodes Retrotransposon Le.RTn1.2006

    • Author(s)
      M.Ninomiya, K.Shishido
    • Journal Title

      Abstracts of 2005-presentations by undergraduate students of Department of Bioscience, School of Bioscience and Biotechnology, Tokyo Institute of Technology

      Pages: 17-17

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A Study on LTR-type Retrotransposon Le.RTn1 of Basidiomycete Lentinula edodes.2006

    • Author(s)
      R.Nobusaka, K.Shishido
    • Journal Title

      Abstracts of 2005-presentations by graduate Couse (Master degree) students of Department of Life Science, Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology

      Pages: 39-39

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genetic engineering of basidiomycetous mushroom.2006

    • Author(s)
      K.Shishido
    • Journal Title

      Biological Activities and Functions of Mushrooms (H.Kawagishi ed.) (CMP Press)

      Pages: 63-71

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Isolation and characterization of long terminal repeat(LTR) retrotransposon Le.RTn1 of the basidiomycete Lentinula edodes2006

    • Author(s)
      Shishido, Sato, Nobusaka, Akiyama, Kaneko, Ninomiya, Katsukawa, Miyazaki
    • Journal Title

      第50回日本菌学会講演要旨集 (印刷中)

    • NAID

      130007005078

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 担子菌シイタケのLTR型レトロトランスポゾンLe.RTn1に関する研究2006

    • Author(s)
      信坂龍, 宍戸和夫
    • Journal Title

      平成17年度 東京工業大学大学院生命理工学研究科 分子生命科学専攻 修士論文発表会講演要旨

      Pages: 39-39

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 担子菌シイタケからのLTR型レトロトランスポゾンのクローニングと解析2004

    • Author(s)
      信坂 龍, 勝川志穂, 秋山涼子, 山崎 丘, 宍戸和夫
    • Journal Title

      日本農芸化学会(平成16年度)大会講演要旨集

      Pages: 20-20

    • Related Report
      2004 Annual Research Report
  • [Book] 遺伝子工学-きのこの生理活性と機能(河岸洋和監修)2005

    • Author(s)
      宍戸和夫(分担)
    • Total Pages
      9
    • Publisher
      シーエムシー出版
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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