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Establishment of molecular biological estimation for age from forensic specimens using changes in human genome with aging

Research Project

Project/Area Number 16590538
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionNagoya University

Principal Investigator

UCHIHI Rieko  Nagoya University, Graduate School of Medicine, Research Associate, 大学院・医学系研究科, 助手 (20223571)

Co-Investigator(Kenkyū-buntansha) KATSUMATA Yoshinao  Nagoya University, Graduate School of Medicine, Professor, 大学院・医学系研究科, 教授 (30109326)
YAMAMOTO Toshimichi  Nagoya University, Graduate School of Medicine, Associate Professor, 大学院・医学系研究科, 助教授 (50260592)
TAMAKI Keiji  Kyoto University, Graduate School of Medicine, Professor, 大学院・医学研究科, 教授 (90217175)
Project Period (FY) 2004 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2005: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2004: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsAging / methylation / age estimation / Pyrosequencing / skin tissue / bisulfited / Pyrosequence法 / エラスチン / セラミド / メラニン / Pyrosequencing法 / コラーゲン
Research Abstract

We selected eight genes related to collagen metabolism such as prolyl 4-hydroxylase (PH), lysyl hydroxylase (LH), procollagen N-proteinase (PNP), procollagen C-proteinase (PCP), prolyl 4-hydroxylase, alpha polypeptide, type 2 (P4HA2), lysyl oxidase (LOX), collagen, type I, alpha-1 (COL1A1) and matrix metalloproteinase 1 (collagenase 1; MMP1) in the first fiscal year, and seven genes of which changes are speculated in skin tissues such as elastin (ELN) constituent to elastic fibers, β-glucocerebrosidase (GBA), sphingomyelinase (SMPD1) and acid ceramidase 1 (ASAH1) related to ceramid metabolism, and tyrosinase (TYR), 5,6-dihydroxy-indole-2-carboxylic acid oxidase (TYRP1), and dopachrome tautomerase (DCT) related to melanin biosynthesis in the second year. A few kinds of PCR primer sets and pyrosequencing primers for the promoter and/or enhancer regions at each gene were designed, PCR reactions were performed using those primer sets with bisulfited template DNA extracted from abdomimal skin tissues collected at autopsy from 4 male and female individuals whose ages ranged from 0 to 80, and then the pyrosequencing reactions were performed. Consequently, only at the second CpG site in TYR-F1 region when using the S2 primer, a strong negative direct proportion between age and methylation were shown. In other almost all regions, no changes of methylation among all samples, or even if some significant changes between samples were observed, those were not concerned to the ages. In the present study, although we could not finally find the clear relationship between methylation at CpG sites and age with skin tissues, it was suggested that some methylated CpG sites related to age might exist because some different degrees of methylation were obsereved in normal tissues.

Report

(3 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • Research Products

    (21 results)

All 2006 2005 2004

All Journal Article (19 results) Book (2 results)

  • [Journal Article] Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci2006

    • Author(s)
      S-L. Li
    • Journal Title

      Hum. Genet. 118

      Pages: 695-707

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Allele frequency distributions at three pentanucleotide repeat STR in a Japanese population2006

    • Author(s)
      H.Ohtaki
    • Journal Title

      J. Forensic Sci. 51(1)

      Pages: 193-194

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci.2006

    • Author(s)
      Li S-L
    • Journal Title

      Human Genetics 118

      Pages: 695-707

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Allele frequency distributions at three pentanucleotide repeat STR in a Japanese population.2006

    • Author(s)
      Ohtaki H
    • Journal Title

      Journal of Forensic Sciences 51(1)

      Pages: 193-194

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Phylogenetic relationship of the populations with and around Japan using 105 short tandem repeat polymorphic loci2006

    • Author(s)
      S-L.Li
    • Journal Title

      Hum.Genet. 118

      Pages: 695-707

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Allele frequency distributions at three pentanucleotide repeat STR in a Japanese population2006

    • Author(s)
      H.Ohtaki
    • Journal Title

      J.Forensic Sciences 51(1)

      Pages: 193-194

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 新しいペンタヌクレオチドSTRマルチプレックス・タイピングシステム2005

    • Author(s)
      打樋利英子
    • Journal Title

      DNA多型 13

      Pages: 21-23

    • NAID

      10015685125

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] 日本人で識別力の高い非コード領域のSNPsのアリール特異的PCRマルチプレックス判定法2005

    • Author(s)
      井上知加子
    • Journal Title

      DNA多型 13

      Pages: 24-26

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] A new multiplex typing system for three pentanucleotide STR loci.2005

    • Author(s)
      Uchihi R
    • Journal Title

      DNA Polymorphisms 13

      Pages: 21-23

    • NAID

      10015685125

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A novel quadruplex typing system by allele-specific PCR for SNPs in non-coding regions with high discriminating power in Japanese.2005

    • Author(s)
      Inoue C
    • Journal Title

      DNA Polymorphisms 13

      Pages: 24-26

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mutations in 14 Y-STR loci among Japanese father-son haplotypes.2004

    • Author(s)
      R.Kurihara
    • Journal Title

      Int. J. Legal Med. 118

      Pages: 125-131

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 日本近隣ヒト集団における105ローカスのSTR多型分析2004

    • Author(s)
      李士林
    • Journal Title

      DNA多型 12

      Pages: 225-227

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] STRマーカーにより診断された二精子性全胞状奇胎を伴う二胎児例2004

    • Author(s)
      山本敏充
    • Journal Title

      DNA多型 12

      Pages: 273-275

    • NAID

      10013661201

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] ヒト遺伝情報の取り扱いについての世界基準について2004

    • Author(s)
      勝又義直
    • Journal Title

      DNA多型 12

      Pages: 283-287

    • NAID

      10013661231

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] Mutations in 14 Y-STR loci among Japanese father-son haplotypes.2004

    • Author(s)
      Kurihara R
    • Journal Title

      International Journal of Legal Medicine 118(3)

      Pages: 125-131

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] STR polymorphism analysis at 105 loci in the populations in/near Japan.2004

    • Author(s)
      Li S-L
    • Journal Title

      DNA Polymorphisms 12

      Pages: 225-227

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Two fetuses case with a dispermic complete hydatidiform mole diagnosed by polymorphic STR markers.2004

    • Author(s)
      Yamamoto T
    • Journal Title

      DNA Polymorphisms 12

      Pages: 273-275

    • NAID

      10013661201

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Global standards on handling of the human genetic information.2004

    • Author(s)
      Katsumata Y
    • Journal Title

      DNA Polymorphisms 12

      Pages: 283-287

    • NAID

      10013661231

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mutations in 14 Y-STR loci among Japanese father-son haplotypes.2004

    • Author(s)
      R.Kurihara
    • Journal Title

      Int.J.Legal Med. 118

      Pages: 125-131

    • Related Report
      2004 Annual Research Report
  • [Book] DNA鑑定-その能力と限界-2005

    • Author(s)
      勝又 義直
    • Total Pages
      305
    • Publisher
      名古屋大学出版会
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Book] DNA profiling - Its ability and limitations.2005

    • Author(s)
      Katsumata Y
    • Publisher
      Nagoya University Press
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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