• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Analysis of allele frequency and de novo mutation at X chromosomal STRs

Research Project

Project/Area Number 16590551
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionOsaka Medical College

Principal Investigator

TAMURA Akiyoshi  Osaka Medical College, Faculty of Medicine, Research Associate, 医学部, 助手 (50207239)

Project Period (FY) 2004 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2005: ¥300,000 (Direct Cost: ¥300,000)
Fiscal Year 2004: ¥500,000 (Direct Cost: ¥500,000)
KeywordsX-STR / DXS10011 / haplotype / mutation / population / allele frequency / 遺伝子頻度 / 親子鑑定 / de novoアリール / DNA多型
Research Abstract

We studied 17 X-STR (DXS101, DXS6789, DXS6800, DXS6803, DXS6807, DXS7132, DXS7133, DXS7423, DXS7424, DXS8377, DXS8378, DXS9895, DXS9898, DXS10011, HUMARA, HPRTB, GATA172D05) polymorphism in 98-151 unrelated Japanese individuals (52-83 males, 39-68 females) and mutation rate in 22 true biological trio families. Power of discrimination (PD) of the 17 X-STRs ranged 0.331-0.933 for male and 0.447-0.997 for female (Table 1-3). Allele frequencies and number of alleles were 0.007-0.853 and 4-35, respectively. High PD values were observed at DXS101 (0.822 male, 0.933 female), DXS6789 (0.799 male, 0.956 female), DXS8377 (0.888 male, 0.981 female), DXS9895 (0.748 male, 0.902 female), DXS10011 (0.930 male, 0.997 female), HUMARA (0.881 male, 0.975 female), and GATA172D05 (0.715 male, 0.912 female). DXS10011 showed the highest PD value among them.
We have detected two de novo alleles at the DXS10011 locus in two paternity trio cases (probabilities : >0.999999). No alleles of the mothers were found to be shared with the daughter in one case and with the son in the other case [10]. The mutation events seem to have occurred during oogenesis, probably by replication slippage. Further studies are needed to evaluate the mutation rate at the locus.

Report

(3 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • Research Products

    (6 results)

All 2006

All Journal Article (6 results)

  • [Journal Article] 蛍光標識プライマーを用いたX-STRの同時検出2006

    • Author(s)
      田村明敬
    • Journal Title

      DNA 多型 Vol.14(印刷中)

    • NAID

      10017571301

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genetic studies of seventeen X-STR in the Japanese population2006

    • Author(s)
      A.Tamura et al.
    • Journal Title

      Progress in Forensic Genetics 11 11 (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Simultaneous analysis of X-STRs with fluorescence dye primers2006

    • Author(s)
      Akiyoshi TAMURA, Misa IWATA, Izumi TAKASE, Kento TSUBOI, Shinya FUKUNISHI, Takeshi TAKAGI, Tokiko MIYAZAKI, Hajime NISHIO, Koichi SUZUKI
    • Journal Title

      DNA POLYMORPHISM Vol.14 (in press)

    • NAID

      10017571301

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genetic studies of seventeen X-STR in the Japanese population2006

    • Author(s)
      A.Tamura, M.Iwata, I.Takase, S.Fukunishi, T.Takagi, K.Tsuboi, T.Miyazaki, H.Nishio, K.Suzuki
    • Journal Title

      Progress in Forensic Genetics 11 (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 蛍光標識プライマーを用いたX-STRの同時検出2006

    • Author(s)
      田村明敬, 他
    • Journal Title

      DNA多型 Vol.14(印刷中)

    • NAID

      10017571301

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Genetic studies of seventeen X-STR in the Japanese population2006

    • Author(s)
      A.Tamura, et al.
    • Journal Title

      Progress in Forensic Genetics 11 11(In press)

    • Related Report
      2005 Annual Research Report

URL: 

Published: 2004-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi