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Diagnastic microarray thr chemo-sensitive and resistant of pancreatic cancer

Research Project

Project/Area Number 16591349
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Digestive surgery
Research InstitutionJichi Medical University

Principal Investigator

SATE Naohiro  Jichi Medical University, Department of Surgery, Professor (20261977)

Co-Investigator(Kenkyū-buntansha) KURIHARA Katsumi  Jichi Medical University, Department of Surgery, Lecturer (20275697)
HYODO Masanobu  Jichi Medical University, Department of Surgery, Lecturer (80337336)
KOIZUMI Masaru  Jichi Medical University, Department of Surgery, Assistant Professor (60337318)
吉澤 浩次  自治医科大学, 医学部, 助教 (00348020)
塚原 宗俊  自治医科大学, 医学部, 助教 (80245696)
Project Period (FY) 2004 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,320,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥120,000)
Fiscal Year 2007: ¥520,000 (Direct Cost: ¥400,000、Indirect Cost: ¥120,000)
Fiscal Year 2006: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2005: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2004: ¥1,200,000 (Direct Cost: ¥1,200,000)
Keywordspancreatic cancer / chemosensitivity / CD-DST / microarrav / 癌遺伝子 / Gemcitabine / 抗癌剤感受性試験
Research Abstract

Background: Chemotherapy plays a key role in the treatment of pancreatic and biliary carcinomas. However the response rates for gemcitabine (alone or combination), the most potent anti-cancer drug, seldom exceed 30%. It is essential to identify chemosensitive and chemoresistant patients prior to commencement of chemotherapy to achieve optimal treatment outcomes. The present study examined the in vitro chemosensitivity of pancreatic and biliary carcinomas to gemcitabine and 5-fluorouracil using the collagen droplet drug sensitivity test (CD-DST). Current in vitro drug-sensitivity tests have limitations and disadvantages. This study investigated the use of gene expression data to predict the sensitivity of pancreatic cancers to gemcitabine. Rational attempts to overcome clinical drug resistance require an understanding of the molecular mechanisms involved. The aim of the present study was to compare gene expression in normal and 5-fluorouracil (5-FU)-resistant pancreatic cancer cells and … More to identify important pathways associated with resistance.
Methods: The study involved 37 pancreatic or biliary carcinoma patients diagnosed at the Jichi Medical University Hospital from 2002 to 2004. Carcinoma cells isolated from the main tumor or metastatic lesions were tested in vitro for gemcitabine and 5-fluorouracil sensitivity using the CD-DST. Cancer cells isolated from 14 pancreatic cancer patients were tested in vitro for gemcitabine sensitivity using the collagen droplet drug sensitivity test (CD-DST). On the basis of this test, 9 of the 14 cancers were identified as either gemcitabine-sensitive or gemcitabine-resistant Total RNA was extracted from each of those nine cancers and used as a template to synthesize Cy3-labeled cDNA. Pancreatic RNA extracted him 6 normal individuals was used as a control. Labeled probes were hybridized to an Atlas Glass Human 1.0 Microarray chip, after which the chips were washed and scanned, and the data analyzed using Microsoft Excel-embedded software. The expression profiles of selected genes were confirmed using real-time PCR analysis. The human pancreatic cell line MIAPaCa-2 was incubated with increasing concentrations of 5-FU in order to develop the 5-FU-resistant derivative cell line MIA-FU-2.4. Gene expression in MIAPaCa-2 and MIA-FU-2.4 cells was compared using gene array analysis. The altered expression of selected genes was confirmed using real-time PCR assays.
Results: The success rate for primary culture was 80.3%. The mean T/C ratios for gemcitabine and 5-fluorouracil were 57.8 and 75.0, respectively (p41031). The median survival times (MST) for gemcitabine-sensitive and -resistant patients were 16.1 and 10.7 months, respectively (p-1.16). Statistical analysis of the microarray data showed that four genes were differentially expressed in gemcitabine-sensitive cancers: microsomal glutathione S-transferase 1 (GSTT1), topoisomerase II alpha (TOP2A), caspase 3 and ATP-binding cassette and sub-family C member 2 (ABCC2). More than 20 other genes were additionally identified as possible candidate genes associated with drug resistance. Array data identified 1075 genes that were differentially expressed between MIAPaCa-2 and MIA-FU-2.4 cells. 5-FU resistance was found to corrrelate with enhanced expression of genes involved in the DNA damage checkpoint pathway RAD1, HUS1, RFC5, RPA3 and CHK2 genes. In addition, TYMS, UP1, PCNA, FEN1, TRAF2, GADD45B, TIA1 and BIRC5 gene expression correlated with 5-FU resistance.
Conclusion: The CD-DST may be a useful method for identifying chemosensitive pancreatic and biliary carcinoma patients prior to chemotherapy. Expression of drug resistance-related genes appeared to predict whether a cancer was gemcitabine-sensitive or -resistant. Finally we picked up RAD1, HUS1, RFC5, RPA3, CHK2 genes, TYMS, UP1, PCNA, FEN1, TRAF2, GADD45B, TIA1, BIRC5, microsomal glutathione S-transferase 1 (GSTT1), topoisomerase II alpha (TOP2A), caspase 3, ATP-binding cassette and sub-family C member 2 (ABCC2) as candidate genes to predict chemo-sensitive or resistant of pancreatic cancer. Less

Report

(5 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (11 results)

All 2008 2007 2004

All Journal Article (8 results) (of which Peer Reviewed: 4 results) Presentation (3 results)

  • [Journal Article] Identification of genes associated with 5-fluorouracil resistance in human pancreatic cancer cells2008

    • Author(s)
      Fu Z, Sata N, Bai J, Zhang Li, Nagai H.
    • Journal Title

      Molecular Biology Reports 35(In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Collagen-gel droplet embedded-culture drug sensitivity test (CD-DST) analysis of clinical pancreatic and biliary carcinomas2008

    • Author(s)
      Sata N, Bai J, Fu Z, Koizumi M, Nagai H.
    • Journal Title

      World J Surg Oncol 6(In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Identification of genes associated with 5-fluorouracil resistance in human pancreatic cancer cells2008

    • Author(s)
      Fu Z, Sata N, Bai J, Zhang, Li, Nagai, H
    • Journal Title

      Mol Biol Rep

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Collagen-gel droplet embedded-culture drug sensitivity test(CD-DST) analysis of clinical pancreatic and biliary carcinomas.2008

    • Author(s)
      Sata N, Bai J, Fu Z, Koizumi M, Nagai, H.
    • Journal Title

      World J Surg Oncol

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Identification of genes associated with 5-fluorouracil resistance in huma npancreatic cancer cells2008

    • Author(s)
      Fu Z, Sata N, Bai J, Nagai H.
    • Journal Title

      Molecular Biology Reports 35

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Gene expression analysis for predicting gemcitabine sensitivity in pancreatic cancer patients2007

    • Author(s)
      Bai J, Sata N, Nagai H.
    • Journal Title

      HBP 9

      Pages: 150-155

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Gene expression analysis for predicting gemcitabine sensitivity in pancreatic cancer patients2007

    • Author(s)
      Bai J, Sata N, Nagai, H
    • Journal Title

      HBP 9

      Pages: 150-155

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Gene expression analysis for predicting gemcitabine sensitivity in pancreatic cancer patients2007

    • Author(s)
      Bai J, Sata N, Nagai H.
    • Journal Title

      HPB 9巻(in the process)

    • Related Report
      2006 Annual Research Report
  • [Presentation] Genetic prediction of gemcitabine sensitivity for pancreatic cancer patient2007

    • Author(s)
      Sata N, Bai J, Koizumi M, Shimura K, Nagai H.
    • Organizer
      IHPBA2007
    • Place of Presentation
      Edinburgh
    • Year and Date
      2007-09-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Genetic prediction of gemcitabine sensitivity for pancreatic cancer patient2007

    • Author(s)
      Sata N, Bai J, Koizumi M, Shimura K, Nagai, H
    • Organizer
      IHPBA. Edinburgh
    • Year and Date
      2007-09-04
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 膵癌化学療法時における遺伝子発現の検討一マイクロアレイ法と抗癌薬感受性試験(CD-DST法)との比較2004

    • Author(s)
      佐田, 尚宏、白, 剣峰、志村, 国彦、小泉, 大、塚原, 宗俊、吉澤, 浩次、栗原, 克巳、永井, 秀雄
    • Organizer
      日本肝胆膵外科合同関連会議2004
    • Place of Presentation
      大阪
    • Year and Date
      2004-05-13
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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