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Development of rapid and comprehensive molecular diagnosis system for genitourinary infections

Research Project

Project/Area Number 16591590
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Urology
Research InstitutionGIFU UNIVERSITY

Principal Investigator

DEGUCHI Takashi  GIFU UNIVERSITY, GRADUATE SCHOOL OF MEDICINE, PROFESSOR, 大学院・医学系研究科, 教授 (40163935)

Co-Investigator(Kenkyū-buntansha) YASUDA Mitsuru  GIFU UNIVERSITY, GRADUATE SCHOOL OF MEDICINE, RESEARCH ASSOCIATE, 大学院・医学系研究科, 助手 (90311703)
石原 哲  岐阜大学, 大学院・医学研究科, 助教授 (00193342)
Project Period (FY) 2004 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2005: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2004: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsUrinary tract infection / Urethritis / Molecular diagnosis
Research Abstract

We have designed universal primers which can amplified the 16S rRNA genes of all possible pathogens causing genitourinary tract infections. We have amplified the DNA fragments of the 16s rRNA genes by PCR with the universal primers, and then hybridized the PCR products with each of the oligonucleotides fixed on the plate to identify the pathogens. We have aimed for the establishment of a rapid and comprehensive diagnosis system for genitourinary tract infections.
To amplify DNA fragments from other microorganisms, including virus and protozoan, we have also designed the primers specific for human papilloma virus, herpes simplex virus, and Trichomonas vaginalis. We have developed the multiplex PCR system to efficiently amplify respective DNA fragment specific for the microorganisms in one tube.
Neisseria gonorrohoeae, Chlamydia trachomatis, Mycoplasma genitalium, and Ureaplasma urealyticum are recognized as pathogens causing sexually transmitted infections. To detect these pathogens rapidly, therefore, we have developed the real-time PCR-based assay with the primers specific for each pathogen. This assay allows quantitative detection of each pathogen in urine samples.
Emergence and increase of antibiotics-resistant N. gonorrhoeae is a clinical concern in Japan. In clinical settings, rapid detection of drug susceptibilities to antibiotics is needed for optimal chemotherapy for gonococcal infections. We are developing the molecular diagnosis system for detecting some mutations associated with resistance to fluoroquinolones and beta-lactams.

Report

(3 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • Research Products

    (16 results)

All 2005 2004

All Journal Article (14 results) Book (2 results)

  • [Journal Article] Emergence and Spread of Neisseria gonorrhoeae Clinical Isolates Harboring Mosaic-Like Structure of Penicillin-Binding Protein 2 in Central Japan2005

    • Author(s)
      Ito M, Deguchi T, Mizutani K, Yasuda M, Yokio S, Ito S-I, Takahashi Y, Ishihara S, Kawamura Y, Ezaki T
    • Journal Title

      Antimicrobial Agents and Chemotherapy 49・1

      Pages: 137-143

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Polymerase chain reaction-based subtyping of Ureaplasma parvum and Ureaplasma urealyticum in first-pass urine samples from men with or without urethritis2005

    • Author(s)
      Yoshida T, Ishiko H, Yasuda M, Takahashi Y, Nomura Y, Kubota Y, Tamaki M, Maeda S, Deguchi T.
    • Journal Title

      Sexually Transmitted Diseases 32・1

      Pages: 454-457

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Cultivation of Neisseria gonorrhoeae in liquid media and determination of its in vitro susceptibilities to quinolones2005

    • Author(s)
      Takei M, Yamaguchi Y, Fukuda H, Yasuda M, Deguchi T.
    • Journal Title

      Journal of Clinical Microbiology 43・9

      Pages: 4321-4327

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] In vitro activity of fluoroquinolones against Mycoplasma genitalium and their bacteriological efficacy for treatment of M. genitalium-positive nongonococcal urethritis in men2005

    • Author(s)
      Yasuda M, Maeda S, Deguchi T.
    • Journal Title

      Clinical Infectious Diseases 41・9

      Pages: 1357-1359

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Emergence and Spread of Neisseria gonorrhoeae Clinical Isolates Harboring Mosaic-Like Structure of Penicillin-Binding Protein 2 in Central Japan2005

    • Author(s)
      Ito M, Deguchi T, Mizutani K, Yasuda M, Yokio S, Ito S-I, Takahashi Y, Ishihara S, Kawamura Y, Ezaki T.
    • Journal Title

      Antimicrobial Agents and Chemotherapy 49(1)

      Pages: 137-143

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Polymerase chain reaction-based subtyping of Ureaplasma parvum and Ureaplasma urealyticum in first-pass urine samples from men with or without urethritis2005

    • Author(s)
      Yoshida T, Ishiko H, Yasuda M, Takahashi Y, Nomura Y, Kubota Y, Tamaki M, Maeda S, Deguchi T.
    • Journal Title

      Sexually Transmitted Diseases 32(1)

      Pages: 454-457

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Cultivation of Neisseria gonorrhoeae in liquid media and determination of its in vitro susceptibilities to quinolones2005

    • Author(s)
      Takei M, Yamaguchi Y, Fukuda H, Yasuda M, Deguchi T.
    • Journal Title

      Journal of Clinical Microbiology 43(9)

      Pages: 4321-4327

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] In vitro activity of fluoroquinolones against Mycoplasma genitalium and their bacteriological efficacy for treatment of M. genitalium-positive nongonococcal urethritis in men2005

    • Author(s)
      Yasuda M, Maeda S, Deguchi T.
    • Journal Title

      Clinical Infectious Diseases 41(9)

      Pages: 1357-1359

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] In vitro activity of fluoroquinolones against Mycoplasma genitalium and their bacteriological efficacy for treatment of M.genitalium-positive nongonococcal urethritis in men2005

    • Author(s)
      Yasuda M, Maeda S, Deguchi T.
    • Journal Title

      Clinical Infectious Diseases 41・9

      Pages: 1357-1359

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Mycoplasma genitalium urethritis in men2004

    • Author(s)
      Ishihara S, Yasuda M, Ito S, Maeda S, Deguchi T.
    • Journal Title

      International Journal of Antimicrobial Agents 24・Supl.1

      Pages: 23-27

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Association of Ureaplasma urealyticum (Biovar 2) with nongonococcal uethritis2004

    • Author(s)
      Deguchi T, Yoshida T, Miyazawa T, Yasuda M, Tamaki M, Ishiko.H, Maeda S
    • Journal Title

      Sexually Transmitted Diseases 31・3

      Pages: 192-195

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mycoplasma genitalium urethritis in men2004

    • Author(s)
      Ishihara S, Yasuda M, Ito S, Maeda S. Deguchi T.
    • Journal Title

      International Journal of Antimicrobial Agents 24(Supl.1)

      Pages: 23-27

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Association of Ureaplasma urealyticum (Biovar 2) with nongonococcal uethritis2004

    • Author(s)
      Deguchi T, Yoshida T, Miyazawa T, Yasuda M, Tamaki M, Ishiko H, Maeda S.
    • Journal Title

      Sexually Transmitted Diseases 31(3)

      Pages: 192-195

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Association of Ureaplasma urealyticum (Biovar 2) with nongonococcal urethritis2004

    • Author(s)
      Deguchi, T., et al.
    • Journal Title

      Sexually Transmitted Diseases 31(3)

      Pages: 192-195

    • Related Report
      2004 Annual Research Report
  • [Book] 性感染症 STD2004

    • Author(s)
      出口 隆, 安田 満, 前田慎一
    • Publisher
      南山堂
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] Mycoplasms Sexually transmitted Diseases2004

    • Author(s)
      Deguchi T, Yasuda M, Ito S, Maeda S.
    • Publisher
      Nanzanndo, Tokyo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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