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Construction of bacterial cell producing biomagnet and useful substances by genome rearrangement

Research Project

Project/Area Number 16H02421
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Biofunction/Bioprocess
Research InstitutionTokyo University of Agriculture and Technology

Principal Investigator

Matsunaga Tadashi  東京農工大学, 工学(系)研究科(研究院), 名誉教授 (10134834)

Co-Investigator(Kenkyū-buntansha) 新垣 篤史  東京農工大学, 工学(系)研究科(研究院), 准教授 (10367154)
Research Collaborator Tanaka Masayoshi  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥26,910,000 (Direct Cost: ¥20,700,000、Indirect Cost: ¥6,210,000)
Fiscal Year 2018: ¥8,580,000 (Direct Cost: ¥6,600,000、Indirect Cost: ¥1,980,000)
Fiscal Year 2017: ¥8,580,000 (Direct Cost: ¥6,600,000、Indirect Cost: ¥1,980,000)
Fiscal Year 2016: ¥9,750,000 (Direct Cost: ¥7,500,000、Indirect Cost: ¥2,250,000)
Keywords応用微生物 / ゲノム / 組織・細胞 / 生体機能利用 / バイオテクノロジー / 合成生物 / 物質生産 / ナノ材料 / 遺伝子
Outline of Final Research Achievements

Magnetotactic bacteria synthesize iron oxide magnetic nanoparticles by accumulating iron ion and crystalize them in the cell. This study aimed to construct novel microorganisms producing both magnetic particles and useful substances. In order to achieve this subject, we utilized and modified the gene set for magnetic particle synthesis from magnetotactic bacteria, and introduced the genes into selected host bacterial strains. Following results were obtained from this study. (1) Construction of magnetotactic bacterial strain containing minimum gene set for magnetic particle synthesis. (2) Selection of optimal host cell for magnetic particle formation. (3) Production of magnetic particles and useful substances in the host bacterial cell.

Academic Significance and Societal Importance of the Research Achievements

本研究では、微生物を用いて磁気微粒子の合成と有用物質生産が同時生産可能であることを示した。また、磁気微粒子合成に関わる遺伝子群を再編成することで、形態や組成の制御された磁気微粒子の合成や異種細菌における磁気微粒子合成の可能性を示した。本研究成果は、微生物を用いた効率的物質生産と磁気的な微生物回収技術としての利用が考えられ、産業利用微生物の応用範囲の拡大に繋がる成果である。また、本研究では、当初予想できなかった新しい遺伝子組換えの現象を見出した。分子生物学、ゲノム科学、合成生物学などの関連学術分野に波及効果のある研究成果であると考えている。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (26 results)

All 2018 2017 2016 Other

All Journal Article (8 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 8 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (16 results) (of which Int'l Joint Research: 12 results,  Invited: 4 results) Book (1 results) Remarks (1 results)

  • [Journal Article] Biosynthesis of Thermoresponsive Magnetic Nanoparticles by Magnetosome Display System2018

    • Author(s)
      Tomoko Yoshino, Takumi Shimada, Yasuhito Ito, Toru Honda, Yoshiaki Maeda, Tadashi Matsunaga, Tsuyoshi Tanaka
    • Journal Title

      Bioconjugate Chemistry

      Volume: 29 Issue: 5 Pages: 1756-1762

    • DOI

      10.1021/acs.bioconjchem.8b00195

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enhanced Tubulation of Liposome Containing Cardiolipin by MamY Protein from Magnetotactic Bacteria2018

    • Author(s)
      Masayoshi Tanaka, Thanawat Suwatthanarak, Atsushi Arakaki, Benjamin R. G. Johnson, Stephen D. Evans, Mina Okochi, Sarah S. Staniland, Tadashi Matsunaga
    • Journal Title

      Biotechnology Journal

      Volume: 13 Issue: 12

    • DOI

      10.1002/biot.201800087

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Production of omega 3 fatty acids in marine cyanobacterium Synechococcus sp strain NKBG 15041c via genetic engineering2017

    • Author(s)
      Tomoko Yoshino, Natsumi Kakunaka, Yue Liang, Yasuhito Ito, Yoshiaki Maeda, Tatsuhiro Nomaguchi, Tadashi Matsunaga, Tsuyoshi Tanaka
    • Journal Title

      Appl. Microbiol. Biotechnol.

      Volume: 101 Issue: 18 Pages: 6899-6905

    • DOI

      10.1007/s00253-017-8407-1

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative and time-course analysis of microbial degradation of 1H,1H,2H,2H,8H,8H-perfluorododecanol in activated sludge2017

    • Author(s)
      Atsushi Arakaki, Shintaro Nakata, Takahito Tokuhisa, Yuta Ogawa, Katsuhiko Sato, Takehiro Sonoi, Stuart P Donachie, Tadashi Matsunaga
    • Journal Title

      Appl. Microbiol. Biotechnol.

      Volume: 101 Issue: 22 Pages: 8259-8266

    • DOI

      10.1007/s00253-017-8538-4

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Core Amino Acid Residues in the Morphology-Regulating Protein, Mms6, for Intracellular Magnetite Biomineralization2016

    • Author(s)
      Ayana Yamagishi, Kaori Narumiya, Masayoshi Tanaka, Tadashi Matsunaga, Atsushi Arakaki
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 35670-35670

    • DOI

      10.1038/srep35670

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Control of Magnetite Nanocrystal Morphology in Magnetotactic Bacteria by Regulation of mms7 Gene Expression2016

    • Author(s)
      Ayana Yamagishi, Masayoshi Tanaka, Jos J. M. Lenders, Jarla Thiesbrummel, Nico A. J. M. Sommerdijk, Tadashi Matsunaga, Atsushi Arakaki
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 29785-29785

    • DOI

      10.1038/srep29785

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Comparative Subcellular Localization Analysis of Magnetosome Proteins Reveals a Unique Localization Behavior of Mms6 Protein onto Magnetite Crystals2016

    • Author(s)
      Atsushi Arakaki, Daiki Kikuchi, Masayoshi Tanaka, Ayana Yamagishi, Takuto Yoda, Tadashi Matsunaga
    • Journal Title

      Journal of Bacteriology

      Volume: 198 Issue: 20 Pages: 2794-2802

    • DOI

      10.1128/jb.00280-16

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Biomagnetic Recovery of Selenium: Bioaccumulating of Selenium Granules in Magnetotactic Bacteria2016

    • Author(s)
      Masayoshi Tanaka, William Knowles, Rosemary Brown, Nicole Hondow, Atsushi Arakaki, Stephen Baldwin, Sarah Staniland, Tadashi Matsunaga
    • Journal Title

      Applied and Environmental Microbiology

      Volume: 82 Issue: 13 Pages: 3886-3891

    • DOI

      10.1128/aem.00508-16

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Reconstruction of magnetosome formation ability in non-magnetic mutant of Magnetospirillum magneticum AMB-12018

    • Author(s)
      Atsushi Arakaki, Tadashi Matsunaga
    • Organizer
      The 6th International Meeting on Magnetotactic Bacteria
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Bioengineering of magnetic nanoparticles produced by Magnetospirillum magneticum AMB-1 for extensive applications2018

    • Author(s)
      Tomoko Yoshino, Tsuyoshi Tanaka, Tadashi Matsunaga
    • Organizer
      The 6th International Meeting on Magnetotactic Bacteria
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] "Iron uptake and magnetosome formation abilities in MAI deletion mutant and genetically modified strain carrying multiple sets of MAI genes2018

    • Author(s)
      Takuto Yoda, Masayoshi Tanaka, Tadashi Matsunaga, Atsushi Arakaki
    • Organizer
      The 6th International Meeting on Magnetotactic Bacteria
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Functional expression of transmembrane receptors on magnetic nanoparticles through a magnetosome-display system2018

    • Author(s)
      Sayaka Tayama, Yasuhiro Sugammata, Shuhei Ota, Yasuhito Ito, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino
    • Organizer
      The 6th International Meeting on Magnetotactic Bacteria
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Modification of phospholipids composition of magnetosomes by employing phosphatidylcholine synthase in magnetotactic bacteria2018

    • Author(s)
      Kazushi Fujimoto, Shuhei Ota, Yasuhito Ito, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino
    • Organizer
      The 6th International Meeting on Magnetotactic Bacteria
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Adsorption study of Mms6 and Mms7 to iron oxide magnetic nanoparticles2018

    • Author(s)
      Kosuke Arai, Wataru Yoshimura, Satoshi Murata, Tadashi Matsunaga, Atsushi Arakaki
    • Organizer
      The 6th International Meeting on Magnetotactic Bacteria
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 弾丸状磁気微粒子合成機構の解析に向けた長鎖DNAの合成2018

    • Author(s)
      篠原奈々美、松永是、新垣篤史
    • Organizer
      第8回CSJ化学フェスタ2018
    • Related Report
      2018 Annual Research Report
  • [Presentation] 生物の作るナノ磁気コンパス ―ミクロな生物の謎を解く―2017

    • Author(s)
      松永 是
    • Organizer
      第312回サイエンスカフェ
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Analysis of magnetite biomineralization in magnetotactic bacteria toward designed synthesis of magnetic nanomaterials2017

    • Author(s)
      Tadashi Matsunaga, Atsushi Arakaki
    • Organizer
      12th Pacific Rim Conference on Ceramic and Glass Technology including Glass & Optical Materials Division Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] A genome-based approach toward designed synthesis of magnetite nanoparticles in bacteria2017

    • Author(s)
      Atsushi Arakaki, Takuto Yoda, Mina Maruyama, Ayana Yamagishi, Tadashi Matsunaga
    • Organizer
      14th International Symposium on Biomineralization
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Enhancement of nanomagnetite particle production in magnetotactic bacteria by introducing multiple sets of magnetite synthesis genes in the genome2017

    • Author(s)
      Takuto Yoda, Mina Maruyama, Tadashi Matsunaga, Atsushi Arakaki
    • Organizer
      14th International Symposium on Biomineralization
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 磁性細菌ゲノムの改変による磁気微粒子合成プロセスの制御2017

    • Author(s)
      新垣 篤史、依田 卓東、丸山 実菜、松永 是
    • Organizer
      第20回バイオテクノロジー部会シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] Unique Localization Behavior of Mms6 Protein During Magnetite Formation2016

    • Author(s)
      Atsushi Arakaki, Ayana Yamagishi, Masayoshi Tanaka, Tadashi Matsunaga
    • Organizer
      5th International Meeting on Magnetotactic Bacteria
    • Place of Presentation
      The Vacanceil Resort, Marseille, France
    • Year and Date
      2016-09-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genetically Functionalized Magnetosomes for Biotechnological Applications2016

    • Author(s)
      Atsushi Arakaki, Tomoko Yoshino, Tadashi Matsunaga
    • Organizer
      5th International Meeting on Magnetotactic Bacteria
    • Place of Presentation
      The Vacanceil Resort, Marseille, France
    • Year and Date
      2016-09-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ナノ磁石の形態デザインに向けた磁性細菌のバイオミネラリゼーションテクノロジー2016

    • Author(s)
      新垣篤史
    • Organizer
      第18回マリンバイオテクノロジー学会
    • Place of Presentation
      北海道大学函館キャンパス、函館市、北海道
    • Year and Date
      2016-05-28
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Understanding of bacterial magnetite formation toward designed synthesis of magnetic nanocrystals2016

    • Author(s)
      Atsushi Arakaki, Ayana Yamagishi, Tadashi Matsunaga
    • Organizer
      2016 MRS Spring Meeting
    • Place of Presentation
      Phoenix Convention Center, Phoenix, Arizona, USA
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Book] Biological Magnetic Materials and Applications2018

    • Author(s)
      Tadashi Matsunaga, Tsuyoshi Tanaka, David Kisailus
    • Total Pages
      199
    • Publisher
      Springer
    • ISBN
      9789811080685
    • Related Report
      2018 Annual Research Report 2017 Annual Research Report
  • [Remarks] 東京農工大学 生命分子工学・海洋生命工学研究室

    • URL

      http://web.tuat.ac.jp/~biomol/

    • Related Report
      2017 Annual Research Report

URL: 

Published: 2016-04-21   Modified: 2020-03-30  

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