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Towards understanding the role for DNMT1 to establish Polycomb-mediated gene silencing

Research Project

Project/Area Number 16H02622
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field General medical chemistry
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Koseki Haruhiko  国立研究開発法人理化学研究所, 生命医科学研究センター, チームリーダー (40225446)

Project Period (FY) 2016-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥42,900,000 (Direct Cost: ¥33,000,000、Indirect Cost: ¥9,900,000)
Fiscal Year 2020: ¥8,060,000 (Direct Cost: ¥6,200,000、Indirect Cost: ¥1,860,000)
Fiscal Year 2019: ¥8,060,000 (Direct Cost: ¥6,200,000、Indirect Cost: ¥1,860,000)
Fiscal Year 2018: ¥8,060,000 (Direct Cost: ¥6,200,000、Indirect Cost: ¥1,860,000)
Fiscal Year 2017: ¥8,840,000 (Direct Cost: ¥6,800,000、Indirect Cost: ¥2,040,000)
Fiscal Year 2016: ¥9,880,000 (Direct Cost: ¥7,600,000、Indirect Cost: ¥2,280,000)
KeywordsDNMT1 / ポリコム群遺伝子 / CpGアイランド / NP95/UHRF1 / RNF20 / ゲノム / 発現制御 / PRC1 / PRC2 / 遺伝子発現 / 複製フォーク
Outline of Final Research Achievements

In mammals, CpG dinucleotides are recognized by not only DNA methylation mechanisms but also Polycomb group (PcG)-related silencing mechanisms. We hypothesized these two distinct mechanism may functionally interact at CpG dinucleotides and addressed the impacts of DNA methylation maintenance mechanisms mediated by DNMT1 and NP95 on PcG-mediated silencing. Intriguingly, we found target binding and silencing by PcG factors required DNMT1 but not NP95. Instead, NP95 was required for de-repression of PcG targets induced by DNMT1 depletion. Biochemical studies revealed NP95 is involved to mediate ubiquitination of EED, a core component of PcG complexes, and its proteasomal degradation. This study revealed an unexpected link between DNA methylation mechanisms and PcG factors to mediate PcG-mediated silencing, which contributes to maintain spatiotemporally restricted expression of development/differentiation-related genes to facilitate normal development and maintenance of homeostasis.

Academic Significance and Societal Importance of the Research Achievements

CpG配列を介したエピジェネティック制御は、発生過程だけではなくがんなどの発症にも強く寄与すること、さらには、その創薬標的になりうることは長く考えられてきた。しかしながら、CpG配列にどのような因子群が作用するのかについて多くのことは知られていなかったため、現実的な創薬戦略の確立には至っていなかった。DNAメチル化制御とポリコム群の間の機能的な連関が明らかになることにより、これらのメカニズムが新たな介入点になりうることが実証された。また、臨床で使用が始められつつあるメチル化阻害剤やポリコム阻害剤の適応拡大や副作用のメカニズム理解に貢献しうる。

Report

(6 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (81 results)

All 2020 2019 2018 2017 2016

All Journal Article (50 results) (of which Int'l Joint Research: 41 results,  Peer Reviewed: 49 results,  Open Access: 49 results,  Acknowledgement Compliant: 3 results) Presentation (31 results) (of which Int'l Joint Research: 21 results,  Invited: 24 results)

  • [Journal Article] Functional annotation of human long noncoding RNAs via molecular phenotyping2020

    • Author(s)
      Ramilowski Jordan A.、Yip Chi Wai、Agrawal Saumya、Chang Jen-Chien、Ciani Yari、Kulakovskiy Ivan V.、...、Carninci Piero
    • Journal Title

      Genome Research

      Volume: 30 Issue: 7 Pages: 1060-1072

    • DOI

      10.1101/gr.254219.119

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Combined Cohesin-Runx1 Deficiency Synergistically Perturbs Chromatin Looping and Causes Myelodysplastic Syndromes2020

    • Author(s)
      Ochi Y, Ogawa Seishi., et al.
    • Journal Title

      Cancer Discov

      Volume: - Issue: 6 Pages: 836-853

    • DOI

      10.1158/2159-8290.cd-19-0982

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Tet2 and Tet3 in B cells are required to repress CD86 and prevent autoimmunity2020

    • Author(s)
      Tanaka, S. Ise, W. Inoue, T. Ito, A. Ono, C. Shima, Y. Sakakibara, S. Nakayama, M. Fujii, K. Miura, I. Sharif, J. Koseki, H. Koni, P. A. Raman, I. Li, Q. Z. Kubo, M. Fujiki, K. Nakato, R. Shirahige, K. Araki, H. Miura, F. Ito, T. Kawakami, E. Baba, Y. Kurosaki, T.
    • Journal Title

      Nature Immunology

      Volume: 21 Issue: 8 Pages: 950-961

    • DOI

      10.1038/s41590-020-0700-y

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Molecular pathogenesis of progression to myeloid leukemia from TET-insufficient status.2020

    • Author(s)
      Shrestha R, Sakata-Yanagimoto M, Maie K, Oshima M, Ishihara M, Suehara Y, Fukumoto K,1 Nakajima-Takagi Y, Matsui H, Kato T, Muto H, Sakamoto T, Kusakabe M, Nannya Y, Makishima H, Ueno H, Saiki R, Ogawa S, Chiba K, Shiraishi Y, Miyano S, Mouly E, Bernard OA, Inaba T, Koseki H, Iwama A, Chiba S
    • Journal Title

      Blood Adv.

      Volume: 4(5) Issue: 5 Pages: 845-854

    • DOI

      10.1182/bloodadvances.2019001324

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Effects of BMP7 produced by group 2 innate lymphoid cells on adipogenesis2020

    • Author(s)
      Miyajima Yurina、Ealey Kafi N、Motomura Yasutaka、Mochizuki Miho、Takeno Natsuki、Yanagita Motoko、Economides Aris N、Nakayama Manabu、Koseki Haruhiko、Moro Kazuyo
    • Journal Title

      International Immunology

      Volume: 32 Issue: 6 Pages: 407-419

    • DOI

      10.1093/intimm/dxaa013

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Pivotal role of CD103 in the development of psoriasiform dermatitis2020

    • Author(s)
      Fukui Takehito、Fukaya Tomohiro、Uto Tomofumi、Takagi Hideaki、Nasu Junta、Miyanaga Noriaki、Nishikawa Yotaro、Koseki Haruhiko、Choijookhuu Narantsog、Hishikawa Yoshitaka、Yamashita Yoshihiro、Sato Katsuaki
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 1-11

    • DOI

      10.1038/s41598-020-65355-9

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Deep phenotyping of myalgic encephalomyelitis/chronic fatigue syndrome in Japanese population.2020

    • Author(s)
      Toshimori K, Fukuda S, et al.
    • Journal Title

      Sci Rep

      Volume: 10 Issue: 1 Pages: 19933-19933

    • DOI

      10.1038/s41598-020-77105-y

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] CDCA7 and HELLS suppress DNA:RNA hybrid-associated DNA damage at pericentromeric repeats2020

    • Author(s)
      Unoki Motoko、Sharif Jafar、Saito Yuichiro、Velasco Guillaume、Francastel Claire、Koseki Haruhiko、Sasaki Hiroyuki
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 17865-17865

    • DOI

      10.1038/s41598-020-74636-2

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The Polycomb group protein Ring1 regulates dorsoventral patterning of the mouse telencephalon.2020

    • Author(s)
      Hikaru Eto#, Yusuke Kishi#*, Nayuta Yakushiji-Kaminatsu, Hiroki Sugishita, Shun Utsunomiya, Haruhiko Koseki, and Yukiko Gotoh* (#Equal contribution, *Correspondence)
    • Journal Title

      Nature Communications

      Volume: 11 Issue: 1 Pages: 5709-5709

    • DOI

      10.1038/s41467-020-19556-5

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Tet DNA demethylase is required for plasma cell differentiation by controlling expression levels of IRF42020

    • Author(s)
      Fujii, K. Tanaka, S. Hasegawa, T. Narazaki, M. Kumanogoh, A. Koseki, H. Kurosaki, T. Ise, W.
    • Journal Title

      International Immunology

      Volume: 32 Issue: 10 Pages: 683-690

    • DOI

      10.1093/intimm/dxaa042

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Human gain-of-function STAT1 mutation disturbs IL-17 immunity in mice2019

    • Author(s)
      Tamaura Moe、Satoh-Takayama Naoko、Tsumura Miyuki、Sasaki Takaharu、Goda Satoshi、Kageyama Tomoko、Hayakawa Seiichi、Kimura Shunsuke、Asano Takaki、Nakayama Manabu、Koseki Haruhiko、Ohara Osamu、Okada Satoshi、Ohno Hiroshi、Kobayashi Masao
    • Journal Title

      International Immunology

      Volume: - Issue: 4 Pages: 259-272

    • DOI

      10.1093/intimm/dxz079

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Synergy between Variant PRC1 Complexes Defines Polycomb-Mediated Gene Repression2019

    • Author(s)
      Fursova NA, Blackledge NP, Nakayama M, Ito S, Koseki Y, Farcas AM, King HW, Koseki H, Klose RJ.
    • Journal Title

      Molecular Cell

      Volume: 印刷中 Issue: 5 Pages: 1020-1036

    • DOI

      10.1016/j.molcel.2019.03.024

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Polycomb Repressive Complex 1 Controls Maintenance of Fungiform Papillae by Repressing Sonic Hedgehog Expression2019

    • Author(s)
      Bar Carmit、Cohen Idan、Zhao Dejian、Pothula Venu、Litskevitch Anna、Koseki Haruhiko、Zheng Deyou、Ezhkova Elena
    • Journal Title

      Cell Reports

      Volume: 28 Issue: 1 Pages: 257-266.e5

    • DOI

      10.1016/j.celrep.2019.06.011

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] KDM2 proteins constrain transcription from CpG island gene promoters independently of their histone demethylase activity2019

    • Author(s)
      Turberfield Anne H、Kondo Takashi、Nakayama Manabu、Koseki Yoko、King Hamish W、Koseki Haruhiko、Klose Robert J
    • Journal Title

      Nucleic Acids Research

      Volume: 47 Issue: 17 Pages: 9005-9023

    • DOI

      10.1093/nar/gkz607

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Phc2 controls hematopoietic stem and progenitor cell mobilization from bone marrow by repressing Vcam1 expression2019

    • Author(s)
      Bae Joonbeom、Choi Sang-Pil、Isono Kyoichi、Lee Ji Yoon、Park Si-Won、Choi Chang-Yong、Han Jihye、Kim Sang-Hoon、Lee Han-Hyoung、Park Kyungmin、Jin Hyun Yong、Lee Suk Jun、Park Chung-Gyu、Koseki Haruhiko、Lee Young Sik、Chun Taehoon
    • Journal Title

      Nature Communications

      Volume: 10 Issue: 1

    • DOI

      10.1038/s41467-019-11386-4

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] KDM2B in polycomb repressive complex 1.1 functions as a tumor suppressor in the initiation of T-cell leukemogenesis.2019

    • Author(s)
      Isshiki Y, Nakajima-Takagi Y, Oshima M, Aoyama K, Rizk M, Kurosawa S, Saraya A, Kondo T, Sakaida E, Nakaseko C, Yokote K, Koseki H, Iwama A.
    • Journal Title

      Blood Adv

      Volume: 3 Issue: 17 Pages: 2537-2549

    • DOI

      10.1182/bloodadvances.2018028522

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] PRC2.1 and PRC2.2 Synergize to Coordinate H3K27 Trimethylation2019

    • Author(s)
      Healy Evan、Mucha Marlena、Glancy Eleanor、Fitzpatrick Darren J.、Conway Eric、Neikes Hannah K.、Monger Craig、Van Mierlo Guido、Baltissen Marijke P.、Koseki Yoko、Vermeulen Michiel、Koseki Haruhiko、Bracken Adrian P.
    • Journal Title

      Molecular Cell

      Volume: 76 Issue: 3 Pages: 437-452.e6

    • DOI

      10.1016/j.molcel.2019.08.012

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Ring1A and Ring1B inhibit expression of Glis2 to maintain murine MOZ-TIF2 AML stem cells2018

    • Author(s)
      Haruko Shima、Emi Takamatsu-Ichihara、Mika Shino、Kazutsune Yamagata、Takuo Katsumoto、Yukiko Aikawa、Shuhei Fujita、Haruhiko Koseki、Issay Kitabayashi
    • Journal Title

      Blood

      Volume: 131 Issue: 16 Pages: 1833-1845

    • DOI

      10.1182/blood-2017-05-787226

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities.2018

    • Author(s)
      Conway E, Jerman E, Healy E, Ito S, Holoch D, Oliviero G, Deevy O, Glancy E, Fitzpatrick DJ, Mucha M, Watson A, Rice AM, Chammas P, Huang C, Pratt-Kelly I, Koseki Y, Nakayama M, Ishikura T, Streubel G, Wynne K, Hokamp K, McLysaght A, Ciferri C, Di Croce L, Cagney G, Margueron R, Koseki H, Bracken AP.
    • Journal Title

      Mol Cell.

      Volume: 70 Issue: 3 Pages: 408-421

    • DOI

      10.1016/j.molcel.2018.03.005

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] PRC1 Fine-tunes Gene Repression and Activation to Safeguard Skin Development and Stem Cell Specification2018

    • Author(s)
      Cohen Idan、Zhao Dejian、Bar Carmit、Valdes Victor J.、Dauber-Decker Katherine L.、Nguyen Minh Binh、Nakayama Manabu、Rendl Michael、Bickmore Wendy A.、Koseki Haruhiko、Zheng Deyou、Ezhkova Elena
    • Journal Title

      Cell Stem Cell

      Volume: 22 Issue: 5 Pages: 726-739.e7

    • DOI

      10.1016/j.stem.2018.04.005

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] FBXL19 recruits CDK-Mediator to CpG islands of developmental genes priming them for activation during lineage commitment2018

    • Author(s)
      Dimitrova Emilia、Kondo Takashi、Feldmann Angelika、Nakayama Manabu、Koseki Yoko、Konietzny Rebecca、Kessler Benedikt M、Koseki Haruhiko、Klose Robert J
    • Journal Title

      eLife

      Volume: 7

    • DOI

      10.7554/elife.37084

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Np95/Uhrf1 regulates tumor suppressor gene expression of neural stem/precursor cells, contributing to neurogenesis in the adult mouse brain2018

    • Author(s)
      Murao Naoya、Matsubara Shuzo、Matsuda Taito、Noguchi Hirofumi、Mutoh Tetsuji、Mutoh Masahiro、Koseki Haruhiko、Namihira Masakazu、Nakashima Kinichi
    • Journal Title

      Neuroscience Research

      Volume: in press Pages: 31-43

    • DOI

      10.1016/j.neures.2018.05.007

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Growing oocyte specific transcription-dependent de novo DNA methylation at the imprinted Zrsr1-DMR2018

    • Author(s)
      Joh, K., Matsuhisa, F., Kitajima, S., Nishioka, K., Higashimoto, K., Yatsuki, H., Kono, T., Koseki, H., Soejima, H.
    • Journal Title

      Epigenetics & Chromatin

      Volume: 11 Issue: 1 Pages: 28-28

    • DOI

      10.1186/s13072-018-0200-6

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Bcor insufficiency promotes initiation and progression of myelodysplastic syndrome.2018

    • Author(s)
      Tara S, Isshiki Y, Nakajima-Takagi Y, Oshima M, Aoyama K, Tanaka T, Shinoda D, Koide S, Saraya A, Miyagi S, Manabe I, Matsui H, Koseki H, Bardwell VJ, Iwama A.
    • Journal Title

      Blood

      Volume: 132(23) Issue: 23 Pages: 2470-2483

    • DOI

      10.1182/blood-2018-01-827964

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Pivotal Role of IL-22 Binding Protein in the Epithelial Autoregulation of Interleukin-22 Signaling in the Control of Skin Inflammation2018

    • Author(s)
      Tomohiro Fukaya, Takehito Fukui, Tomofumi Uto, Hideaki Takagi, Junta Nasu, Noriaki, Miyanaga, Keiichi Arimura, Takeshi Nakamura, Haruhiko Koseki, Narantsog Choijookhuu, Yoshitaka Hishikawa, Katsuaki Sato
    • Journal Title

      Frontiers in Immunology

      Volume: 9 Pages: 1-13

    • DOI

      10.3389/fimmu.2018.01418

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Variant PRC1 competes with retinoic acid-related signals to repress Meis2 in the mouse distal forelimb bud2018

    • Author(s)
      Yakushiji-Kaminatsui Nayuta、Kondo Takashi、Hironaka Ken-ichi、Sharif Jafar、Endo Takaho A.、Nakayama Manabu、Masui Osamu、Koseki Yoko、Kondo Kaori、Ohara Osamu、Vidal Miguel、Morishita Yoshihiro、Koseki Haruhiko
    • Journal Title

      Development

      Volume: 145

    • DOI

      10.1242/dev.166348

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] DNMTs and SETDB1 function as co-repressors in MAX-mediated repression of germ cell-related genes in mouse embryonic stem cells2018

    • Author(s)
      Tatsumi Daiki、Hayashi Yohei、Endo Mai、Kobayashi Hisato、Yoshioka Takumi、Kiso Kohei、Kanno Shinichiro、Nakai Yuji、Maeda Ikuma、Mochizuki Kentaro、Tachibana Makoto、Koseki Haruhiko、Okuda Akihiko、Yasui Akira、Kono Tomohiro、Matsui Yasuhisa
    • Journal Title

      PLOS ONE

      Volume: 13 Issue: 11 Pages: e0205969-e0205969

    • DOI

      10.1371/journal.pone.0205969

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Smchd1 Targeting to the Inactive X Is Dependent on the Xist-HnrnpK-PRC1 Pathway2018

    • Author(s)
      Jansz Natasha、Nesterova Tatyana、Keniry Andrew、Iminitoff Megan、Hickey Peter F.、Pintacuda Greta、Masui Osamu、Kobelke Simon、Geoghegan Niall、Breslin Kelsey A.、Willson Tracy A.、Rogers Kelly、Kay Graham F.、Fox Archa H.、Koseki Haruhiko、Brockdorff Neil、Murphy James M.、Blewitt Marnie E.
    • Journal Title

      Cell Reports

      Volume: 25 Issue: 7 Pages: 1912-1923.e9

    • DOI

      10.1016/j.celrep.2018.10.044

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] PRC1 preserves epidermal tissue integrity independently of PRC22018

    • Author(s)
      Cohen Idan、Zhao Dejian、Menon Gopinathan、Nakayama Manabu、Koseki Haruhiko、Zheng Deyou、Ezhkova Elena
    • Journal Title

      Genes & Development

      Volume: 33 Issue: 1-2 Pages: 55-60

    • DOI

      10.1101/gad.319939.118

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Ubiquitination-independent repression of PRC1 targets during neuronal fate restriction in the developing mouse neocortex2018

    • Author(s)
      Masafumi Tsuboi, Yusuke Kishi, Wakana Kyozuka, Haruhiko Koseki, Yusuke Hirabayashi, and Yukiko Gotoh*
    • Journal Title

      Developmental Cell

      Volume: 47 Issue: 6 Pages: 758-772

    • DOI

      10.1016/j.devcel.2018.11.018

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] PCGF6-PRC1 suppresses premature differentiation of mouse embryonic stem cells by regulating germ cell-related genes.2017

    • Author(s)
      Endoh M, Endo TA, Shinga J, Hayashi K, Farcas A, Ma KW, Ito S, Sharif J, Endoh T, Onaga N, Nakayama M, Ishikura T, Masui O, Kessler BM, Suda T, Ohara O, Okuda A, Klose RJ, Koseki H.
    • Journal Title

      Elife

      Volume: 6 Pages: 27970-27970

    • DOI

      10.7554/elife.21064

    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Gene Resistance to Transcriptional Reprogramming following Nuclear Transfer Is Directly Mediated by Multiple Chromatin-Repressive Pathways2017

    • Author(s)
      Jullien J, Vodnala M, Pasque V, Oikawa M, Miyamoto K, Allen G, David SA, Brochard V, Wang S, Bradshaw C, Koseki H, Sartorelli V, Beaujean N, Gurdon J
    • Journal Title

      Molecular Cell

      Volume: 65 Issue: 5 Pages: 873-884

    • DOI

      10.1016/j.molcel.2017.01.030

    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] PCGF3/5-PRC1 initiates Polycomb recruitment in X chromosome inactivation.2017

    • Author(s)
      Almeida M, Pintacuda G, Masui O, Koseki Y, Gdula M, Cerase A, Brown D, Mould A, Innocent C, Nakayama M, Schermelleh L, Nesterova TB, Koseki H, Brockdorff N.
    • Journal Title

      Science

      Volume: 356 Issue: 6342 Pages: 1081-1084

    • DOI

      10.1126/science.aal2512

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Pramel7 mediates ground-state pluripotency through proteasomal-epigenetic combined pathways.2017

    • Author(s)
      Graf U, Casanova EA, Wyck S, Dalcher D, Gatti M, Vollenweider E, Okoniewski MJ, Weber FA, Patel SS, Schmid MW, Li J, Sharif J, Wanner GA, Koseki H, Wong J, Pelczar P, Penengo L, Santoro R, Cinelli P.
    • Journal Title

      Nat Cell Biol

      Volume: 19 Issue: 7 Pages: 763-773

    • DOI

      10.1038/ncb3554

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] CFC1 is a cancer stemness-regulating factor in neuroblastoma2017

    • Author(s)
      Chikaraishi Koji、Takenobu Hisanori、Sugino Ryuichi P.、Mukae Kyosuke、Akter Jesmin、Haruta Masayuki、Kurosumi Masafumi、Endo Takaho A.、Koseki Haruhiko、Shimojo Naoki、Ohira Miki、Kamijo Takehiko
    • Journal Title

      Oncotarget

      Volume: 8 Issue: 28 Pages: 45046-45059

    • DOI

      10.18632/oncotarget.18464

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] EPC1/TIP60-Mediated Histone Acetylation Facilitates Spermiogenesis in Mice2017

    • Author(s)
      Dong Yixin、Isono Kyo-ichi、Ohbo Kazuyuki、Endo Takaho A.、Ohara Osamu、Maekawa Mamiko、Toyama Yoshiro、Ito Chizuru、Toshimori Kiyotaka、Helin Kristian、Ogonuki Narumi、Inoue Kimiko、Ogura Atsuo、Yamagata Kazutsune、Kitabayashi Issay、Koseki Haruhiko
    • Journal Title

      Molecular and Cellular Biology

      Volume: 37 Issue: 19

    • DOI

      10.1128/mcb.00082-17

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Crosstalk between NRF2 and HIPK2 shapes cytoprotective responses.2017

    • Author(s)
      Torrente L, Sanchez C, Moreno R, Chowdhry S, Cabello P, Isono K, Koseki H, Honda T, Hayes JD, Dinkova-Kostova AT, de la Vega L.
    • Journal Title

      Oncogene

      Volume: 36 Issue: 44 Pages: 6204-6212

    • DOI

      10.1038/onc.2017.221

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Prolonged Mek1/2 suppression impairs the developmental potential of embryonic stem cells.2017

    • Author(s)
      Choi J, Huebner AJ, Clement K, Walsh RM, Savol A, Lin K, Gu H, Di Stefano B, Brumbaugh J, Kim SY, Sharif J, Rose CM, Mohammad A, Odajima J, Charron J, Shioda T, Gnirke A, Gygi S, Koseki H, Sadreyev RI, Xiao A, Meissner A, Hochedlinger K.
    • Journal Title

      Nature

      Volume: 548 Issue: 7666 Pages: 219-223

    • DOI

      10.1038/nature23274

    • Related Report
      2017 Annual Research Report
    • Open Access
  • [Journal Article] Internal deletion of BCOR reveals a tumor suppressor function for BCOR in T lymphocyte malignancies2017

    • Author(s)
      Tanaka Tomoyuki、Nakajima-Takagi Yaeko、Aoyama Kazumasa、Tara Shiro、Oshima Motohiko、Saraya Atsunori、Koide Shuhei、Si Sha、Manabe Ichiro、Sanada Masashi、Nakayama Manabu、Masuko Masayoshi、Sone Hirohito、Koseki Haruhiko、Iwama Atsushi
    • Journal Title

      The Journal of Experimental Medicine

      Volume: 214 Issue: 10 Pages: 2901-2913

    • DOI

      10.1084/jem.20170167

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The SET1 Complex Selects Actively Transcribed Target Genes via Multivalent Interaction with CpG Island Chromatin.2017

    • Author(s)
      Brown DA, Di Cerbo V, Feldmann A, Ahn J, Ito S, Blackledge NP, Nakayama M, McClellan M, Dimitrova E, Turberfield AH, Long HK, King HW, Kriaucionis S, Schermelleh L, Kutateladze T, Koseki H, Klose RJ.
    • Journal Title

      Cell Rep

      Volume: 20 Issue: 10 Pages: 2313-2327

    • DOI

      10.1016/j.celrep.2017.08.030

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Polycomb directs timely activation of germline genes in spermatogenesis2017

    • Author(s)
      Maezawa S, Hasegawa K, Yukawa M, Sakashita A, Alavattam KG, Andreassen PR, Vidal M, Koseki H, Barski A, Namekawa SH.
    • Journal Title

      Genes Dev

      Volume: 31 Issue: 16 Pages: 1693-1703

    • DOI

      10.1101/gad.302000.117

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Role of UHRF1 in de novo DNA methylation in oocytes and maintenance methylation in preimplantation embryos.2017

    • Author(s)
      Maenohara S, Unoki M, Toh H, Ohishi H, Sharif, J, Koseki, H, Sasaki H.
    • Journal Title

      PLoS Genet

      Volume: 13 Issue: 10 Pages: e1007042-e1007042

    • DOI

      10.1371/journal.pgen.1007042

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] An endosiRNA-Based Repression Mechanism Counteracts Transposon Activation during Global DNA Demethylation in Embryonic Stem Cells.2017

    • Author(s)
      Berrens RV, Andrews S, Spensberger D, Santos F, Dean W, Gould P, Sharif J, Olova N, Chandra T, Koseki H, von Meyenn F, Reik W.
    • Journal Title

      Cell Stem Cell

      Volume: 21 Issue: 5 Pages: 694-703

    • DOI

      10.1016/j.stem.2017.10.004

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] No Winter Lasts Forever: Polycomb Complexes Convert Epigenetic Memory of Cold into Flowering2017

    • Author(s)
      Sharif J, Koseki H.
    • Journal Title

      Dev Cell

      Volume: 42 Issue: 6 Pages: 563-564

    • DOI

      10.1016/j.devcel.2017.09.004

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Loss of Pcgf5 Affects Global H2A Monoubiquitination but Not the Function of Hematopoietic Stem and Progenitor Cells2016

    • Author(s)
      Si S, Nakajima-Takagi Y, Aoyama K, Oshima M, Saraya A, Sugishita H, Nakayama M, Ishikura T, Koseki H, Iwama A
    • Journal Title

      PLoS One

      Volume: 11 Issue: 5 Pages: e0154561-e0154561

    • DOI

      10.1371/journal.pone.0154561

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Activation of Endogenous Retroviruses in Dnmt1-/- ESCs Involves Disruption of SETDB1-Mediated Repression by NP95 Binding to Hemimethylated DNA.2016

    • Author(s)
      Sharif J, Endo TA, Nakayama M, Karimi MM, Shimada M, Katsuyama K, Goyal P, Brind'Amour J, Sun MA, Sun Z, Ishikura T, Mizutani-Koseki Y, Ohara O, Shinkai Y, Nakanishi M, Xie H, Lorincz MC, Koseki H.
    • Journal Title

      Cell Stem Cell

      Volume: Epub ahead of print Issue: 1 Pages: 999-999

    • DOI

      10.1016/j.stem.2016.03.013

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Functional analysis of AEBP2, a PRC2 Polycomb protein, reveals a Trithorax phenotype in embryonic development and in ESCs.2016

    • Author(s)
      Grijzenhout A, Godwin J, Koseki H, Gdula MR, Szumska D, McGouran JF, Bhattacharya S, Kessler BM, Brockdorff N, Cooper S
    • Journal Title

      Development

      Volume: 143 Issue: 15 Pages: 2716-2723

    • DOI

      10.1242/dev.123935

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] ThPOK represses CXXC5, which induces methylation of histone H3 lysine 9 in Cd40lg promoter by association with SUV39H1: implications in repression of CD40L expression in CD8+ cytotoxic T cells.2016

    • Author(s)
      Tsuchiya Y, Naito T, Tenno M, Maruyama M, Koseki H, Taniuchi I, Naoe Y.
    • Journal Title

      J Leukoc Biol.

      Volume: 印刷中 Issue: 2 Pages: 327-338

    • DOI

      10.1189/jlb.1a0915-396rr

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Histone H2A T120 Phosphorylation Promotes Oncogenic Transformation via Upregulation of Cyclin D1.2016

    • Author(s)
      Aihara H
    • Journal Title

      Mol. Cell.

      Volume: 64 Issue: 1 Pages: 176-188

    • DOI

      10.1016/j.molcel.2016.09.012

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Conversion of T cells to B cells by inactivation of polycomb-mediated epigenetic suppression of the B-lineage program.2016

    • Author(s)
      Ikawa T, Masuda K, Endo TA, Endo M, Isono K, Koseki Y, Nakagawa R, Kometani K, Takano J, Agata Y, Katsura Y, Kurosaki T, Vidal M, Koseki H, Kawamoto H.
    • Journal Title

      Genes. Dev.

      Volume: 30 Issue: 22 Pages: 2475-2485

    • DOI

      10.1101/gad.290593.116

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] ポリコム群による抑制ドメインの複製機構の解明2020

    • Author(s)
      古関 明彦
    • Organizer
      第1回新学術領域「非ゲノム情報複製」領域会議
    • Related Report
      2020 Annual Research Report
  • [Presentation] Polycomb in haematipoietic differentiation2020

    • Author(s)
      古関 明彦
    • Organizer
      The Chromatin and Epigenetics biweekly virtual seminar series, Tsinghua University
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The role for enhancer of polycomb in chromatin replication and epigenetic inheritance2019

    • Author(s)
      Haruhiko Koseki
    • Organizer
      3rd RIKEN IMS-Stanford ISCBRM Joint Symposium
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Variant PRC1 in cellular differentiation2019

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Friedrich Miescher Institute for Biomedical Research
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Variant PRC1 in cellular differentiation2019

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Keble College
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Variant PCGF1-PRC1 is linked to proteasomal pathway to activate Polycomb target genes during development2019

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Gordon Research Conference
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 哺乳類ポリコム群による発生過程の制御 Variant PRC1 in cellular differentiation2019

    • Author(s)
      Haruhiko Koseki
    • Organizer
      日本遺伝学会第91回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ポリコム、分化、複製2019

    • Author(s)
      Haruhiko Koseki
    • Organizer
      新学術領域「多様かつ堅牢な細胞形質をさせる非ゲノム情報複製機構」第1回領域会議
    • Related Report
      2019 Annual Research Report
  • [Presentation] Polycomb in development2018

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Shandong University School of Life ScienceJinan, China
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Polycomb in development2018

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Shandong University School of Medicine
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Polycomb in development2018

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Cold Spring Harbor Asia
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] variant PRC1.1 in transcriptional phase transition2018

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Friedrich Miescher Institute for Biomedical Research
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Induced activation of Polycomb-repressed genes in mice2018

    • Author(s)
      Haruhiko Koseki
    • Organizer
      The European Molecular Biology Laboratory (EMBL)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Variant PRC1 in gene activation and inactivation2018

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Curie Institute
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Variant PRC1 in gene activation and inactivation2018

    • Author(s)
      Haruhiko Koseki
    • Organizer
      Keble College
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Gene regulation by Polycomb variants2017

    • Author(s)
      Koseki H
    • Organizer
      RIKEN-McGill Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Clinical potential of iPS cell-derived invariant NKT cells2017

    • Author(s)
      Koseki H
    • Organizer
      Stanford ISCBRM-RIKEN IMS Joint Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Polycomb-mediated regulation of transition of transcriptional status2017

    • Author(s)
      Koseki H
    • Organizer
      第69回日本細胞生物学会大会 The 69th Annual Meeting of the Japan Sciety for Cell Biology
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 「iPS 細胞由来NKT 細胞によるがん治療技術の開発」 Development of adoptive immunotherapy for cancer using iPS-derived NKT cells2017

    • Author(s)
      Koseki H
    • Organizer
      第21回日本がん免疫学会総会 The 21st Annual Meeting of Japanese Association of Cancer Immunology
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Meis2 activation by Kdm2b-containing complexesOxford University2017

    • Author(s)
      Koseki H
    • Organizer
      Oxford University
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Meis2 activation by Kdm2b-containing complexesThe Babraham Institute2017

    • Author(s)
      Koseki H
    • Organizer
      The Babraham Institute
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Meis2 activation by Kdm2b-containing complexes2017

    • Author(s)
      Koseki H
    • Organizer
      Smurfit Institute of Genetics, Trinity College Dublin
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Activating Polycomb-repressed genes in mammals2017

    • Author(s)
      Koseki H
    • Organizer
      France-Japan Epigenetics Workshop
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Meis2 regulation by Kdm2b complexes in developing midbrain2017

    • Author(s)
      Koseki H
    • Organizer
      Friedrich Miescher Institute for Biomedical Research
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Meis2 regulation by Kdm2b complexes in developing midbrain2017

    • Author(s)
      Koseki H
    • Organizer
      Biotech Research & Innovation Centre (BRIC) University of Copenhagen
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The role of PRC1 variants during activation of Meis22016

    • Author(s)
      古関 明彦
    • Organizer
      Max-Planck Institute of Immunobiology and Epigenetics
    • Place of Presentation
      Freiburg, Germany
    • Year and Date
      2016-11-11
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Regulation of promoter/enhancer interaction of Meis2 by KDM2B2016

    • Author(s)
      古関 明彦
    • Organizer
      Centro de investigaciones Biológicas (CSIC)
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2016-11-07
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Polycomb in transcriptional phase transition of developmental genes2016

    • Author(s)
      古関 明彦
    • Organizer
      Mini Symposium, Genetic Control of Mouse embryonic Development at Hubrecht Institute
    • Place of Presentation
      Utrecht, the Netherlands
    • Year and Date
      2016-06-30
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] PCGF6-PRC1 to suppress premature activation of meiosis/germ cell related genes in ES cells2016

    • Author(s)
      古関 明彦
    • Organizer
      Trinity College, Oxford University
    • Place of Presentation
      Oxford, UK
    • Year and Date
      2016-06-27
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] PCGF6-PRC1 to suppress premature activation of meiosis/germ cell related genes in ES cells2016

    • Author(s)
      古関 明彦
    • Organizer
      Basel Stem Cell Network, Freidrich Miescher Institute
    • Place of Presentation
      Basel, Switzerland
    • Year and Date
      2016-06-23
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 形態形成のエピジェネティック制御2016

    • Author(s)
      古関 明彦
    • Organizer
      秋田大学大学院医学系研究科・医学部
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
    • Invited

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Published: 2016-04-21   Modified: 2022-01-27  

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