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Electronic structure simulation towards magnetic property predictions for metalloenzymic and catalytic molecules

Research Project

Project/Area Number 16H04101
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical chemistry
Research InstitutionNagoya University (2018)
Institute for Molecular Science (2016-2017)

Principal Investigator

Yanai Takeshi  名古屋大学, 理学研究科(WPI), 教授 (00462200)

Co-Investigator(Kenkyū-buntansha) 中嶋 隆人  国立研究開発法人理化学研究所, 計算科学研究センター, チームリーダー (10312993)
Research Collaborator CHALUPSKÝ Jakub  
RULISEK Lubomir  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥16,900,000 (Direct Cost: ¥13,000,000、Indirect Cost: ¥3,900,000)
Fiscal Year 2018: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Fiscal Year 2017: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2016: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Keywords理論計算 / 磁性 / 繰り込み群 / 多配置計算 / 摂動計算 / 電子スピン共鳴法 / 金属酵素 / 触媒
Outline of Final Research Achievements

Electron Paramagnetic Resonance method is an experimental approach to characterize chemical phenomena involving radicals or electronic spins. We have developed an efficient theoretical and computational approach for interpretation of EPR spectrum. It is based on quantum chemistry wave function theory with density matrix renormalization group (DMRG), which is suited for reliably describe open-shell molecular systems where strong electron correlation plays a major role in forming their electronic states. We showed that our DMRG based approach is highly efficient for evaluating magnetic properties, such as hyperfine fine constants, and g-tensors, etc, for the radical or open-shell molecular systems. The relativistic extension to handle heavy element systems and quasi-degenerate perturbation theory to account for weak correlation and/or spin-orbit coupling have been developed and assessed for illustrative molecular systems.

Academic Significance and Societal Importance of the Research Achievements

金属錯体・酵素の反応機構や反応性の分子機構を解明するには、磁気分光測定と量子化学計算の連携が極めて強力である。本方法論は、第一原理計算に基づき、多様な金属錯体系への展開することが可能である。従来法は精度を保証することが難しい点があったが、本手法は従来の限界を超えた高精度計算を提示できる。金属錯体の分子構造および金属イオンの電子状態の微細な情報を信頼性高く与えうる。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (31 results)

All 2018 2017 2016 Other

All Int'l Joint Research (5 results) Journal Article (12 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 12 results,  Open Access: 1 results,  Acknowledgement Compliant: 4 results) Presentation (14 results) (of which Int'l Joint Research: 9 results,  Invited: 14 results)

  • [Int'l Joint Research] ノースウエスタン大学(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] ノースウエスタン大学(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] 有機化学生物化学研究所(チェコ)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ノースウエスタン大学(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] 有機化学生物化学研究所(チェコ)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Large-scale relativistic complete active space self-consistent field with robust convergence2018

    • Author(s)
      Reynolds Ryan D.、Yanai Takeshi、Shiozaki Toru
    • Journal Title

      The Journal of Chemical Physics

      Volume: 149 Issue: 1 Pages: 014106-014106

    • DOI

      10.1063/1.5036594

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Electronically Excited Solute Described by RISM Approach Coupled with Multireference Perturbation Theory: Vertical Excitation Energies of Bioimaging Probes2018

    • Author(s)
      Shimizu Ryosuke Y.、Yanai Takeshi、Kurashige Yuki、Yokogawa Daisuke
    • Journal Title

      Journal of Chemical Theory and Computation

      Volume: 14 Issue: 11 Pages: 5673-5679

    • DOI

      10.1021/acs.jctc.8b00599

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Magnetic Circular Dichroism of an Unaromatic Planar [8]Annulene2018

    • Author(s)
      Jin Wen、Takayuki Uto、Jakub Chalupsky、Deborah L. Casher、Gerhard Raabe、Joerg Fleischhauer、Takeshi Yanai、Hayato Tsuji、Koichi Komatsu、Josef Michl
    • Journal Title

      Journal of Physical Organic Chemistry

      Volume: 印刷中 Issue: 8

    • DOI

      10.1002/poc.3854

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Direct Observation of the Ultrafast Evolution of Open-Shell Biradical in Photochromic Radical Dimer2017

    • Author(s)
      Yoichi Kobayashi, Hajime Okajima, Hikaru Sotome, Takeshi Yanai, Katsuya Mutoh, Yusuke Yoneda, Yasuteru Shigeta, Akira Sakamoto, Hiroshi Miyasaka, and Jiro Abe
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 139 Issue: 18 Pages: 6382-6389

    • DOI

      10.1021/jacs.7b01598

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Coherent singlet fission activated by symmetry breaking2017

    • Author(s)
      Miyata Kiyoshi、Kurashige Yuki、Watanabe Kazuya、Sugimoto Toshiki、Takahashi Shota、Tanaka Shunsuke、Takeya Jun、Yanai Takeshi、Matsumoto Yoshiyasu
    • Journal Title

      Nature Chemistry

      Volume: 9 Issue: 10 Pages: 983-989

    • DOI

      10.1038/nchem.2784

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Projector Augmented Wave Method Incorporated into Gauss-Type Atomic Orbital Based Density Functional Theory2017

    • Author(s)
      Xiong Xiao-Gen、Yanai Takeshi
    • Journal Title

      Journal of Chemical Theory and Computation

      Volume: 13 Issue: 7 Pages: 3236-3249

    • DOI

      10.1021/acs.jctc.7b00404

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Multistate Complete-Active-Space Second-Order Perturbation Theory Based on Density Matrix Renormalization Group Reference States2017

    • Author(s)
      Yanai Takeshi、Saitow Masaaki、Xiong Xiao-Gen、Chalupsky Jakub、Kurashige Yuki、Guo Sheng、Sharma Sandeep
    • Journal Title

      Journal of Chemical Theory and Computation

      Volume: 13 Issue: 10 Pages: 4829-4840

    • DOI

      10.1021/acs.jctc.7b00735

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Influence of the choice of projection manifolds in the CASPT2 implementation2017

    • Author(s)
      T. Yanai, Y. Kurashige, M. Saitow, J. Chalupsky, R. Lindh, P.-A. Malmqvist
    • Journal Title

      Mol. Phys.

      Volume: 印刷中 Issue: 17-18 Pages: 2077-2085

    • DOI

      10.1080/00268976.2016.1271152

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Triplet-triplet Annihilation Process of 9,10-diphenylanthracene in solution2017

    • Author(s)
      R. Sato, H. Kioth-Nishioka, T. Yanai, Y. Shigeta
    • Journal Title

      Chem. Lett.

      Volume: 印刷中 Issue: 6 Pages: 873-875

    • DOI

      10.1246/cl.170161

    • NAID

      130005689352

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Hyperfine Coupling Constants from Internally Contracted Multireference Perturbation Theory2016

    • Author(s)
      T. Shiozaki, and T. Yanai
    • Journal Title

      J. Comp. Theo. Chem.

      Volume: 12 Issue: 9 Pages: 4347-4351

    • DOI

      10.1021/acs.jctc.6b00646

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Computational Evidence of Inversion of 1La and 1Lb-Derived Excited States in Naphthalene Excimer Formation from ab Initio Multireference Theory with Large Active Space: DMRG-CASPT2 Study2016

    • Author(s)
      S. Shirai, Y. Kurashige, and T. Yanai
    • Journal Title

      J. Chem. Theo. Comp.

      Volume: - Issue: 5 Pages: 2366-2372

    • DOI

      10.1021/acs.jctc.6b00210

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] MADNESS: A Multiresolution, Adaptive Numerical Environment for Scientific Simulation2016

    • Author(s)
      R. Harrison, G. Beylkin, F. Bischoff, J. Calvin, G. Fann, J. Fosso-Tande, D. Galindo, J. Hammond, R. Hartman-Baker, J. Hill, J. Jia, J. Kottmann, M-J. Yvonne Ou, L. Ratcliff, M. Reuter, A. Richie-Halford, N. Romero, H. Sekino, W. Shelton, A. Vazquez-Mayagoitia, N. Vence, T. Yanai, Y. Yokoi
    • Journal Title

      SIAM Journal on Scientific Computing

      Volume: 38 Issue: 5 Pages: S123-S142

    • DOI

      10.1137/15m1026171

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] DMRG-based Multistate Multireference Perturbation Theory2018

    • Author(s)
      T. Yanai
    • Organizer
      ICQC 2018 Satellite Meeting, Theoretical Studies of Magnetic Systems: Methodological Developments and Applications
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 高速量子多体アルゴリズムを用いた量子化学計算の進展2018

    • Author(s)
      柳井 毅
    • Organizer
      化学科セミナー ~物理化学研究の新潮流
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 密度行列繰り込み群を用いた多参照電子状態の量子化学計算2018

    • Author(s)
      柳井 毅
    • Organizer
      富士フィルム(神奈川県南足柄市) 解析技術センターセミナー
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 密度行列繰り込み群を用いた量子化学計算2017

    • Author(s)
      柳井 毅
    • Organizer
      有機固体若手の会2017
    • Place of Presentation
      神奈川, 湯河原, ホテルあかね
    • Year and Date
      2017-03-09
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Quantum chemistry with correlated many-electron theory2017

    • Author(s)
      柳井 毅
    • Organizer
      OKAZAKI - STRASBOURG Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Projector Augmented Wave Method Incorporated into Gauss-type Atomic Orbital Based Density Functional Theory2017

    • Author(s)
      柳井 毅
    • Organizer
      New Frontiers in Electron Correlation
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Quantum chemistry with highly entangled many-electron theory2017

    • Author(s)
      柳井 毅
    • Organizer
      2017 Summer Symposium of KCS-Physical Chemistry Division and 2017 Korea-Japan Molecular Science Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Projector Augmented Wave Method Incorporated into Gauss-type Atomic Orbital Based Density Functional Theory2017

    • Author(s)
      柳井 毅
    • Organizer
      The 11th Triennial Congress of the World Association of Theoretical and Computational Chemists
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Advanced Multireference Electronic Structure Theory with ab initio Density Matrix Renormalization Group2017

    • Author(s)
      柳井 毅
    • Organizer
      The 8th Asia-Pacific Conference of Theoretical and Computational Chemistry
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Multireference theory based on density matrix renormalization group2016

    • Author(s)
      T. Yanai
    • Organizer
      Theory and Applications of Computational Chemistry 2016
    • Place of Presentation
      Seattle, USA
    • Year and Date
      2016-08-28
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] CASPT2 theory with DMRG reference wavefunction2016

    • Author(s)
      T. Yanai
    • Organizer
      The 8th Molecular Quantum Mechanics
    • Place of Presentation
      Uppsala, Sweden
    • Year and Date
      2016-06-26
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 密度行列繰り込み群に基づく拡張多状態多参照擬縮重摂動理論2016

    • Author(s)
      柳井 毅
    • Organizer
      第10回 革新的量子化学シンポジウム
    • Place of Presentation
      京都府京都市, キャンパスプラザ京都
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Molecular electronic structure theory based on ab initio density matrix renormalization group2016

    • Author(s)
      T. Yanai
    • Organizer
      Tensor Networks and Quantum Many-Body Problems (TNQMP2016)
    • Place of Presentation
      Institute for Solid State Physics, Kashiwa, Chiba
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 金属酵素の多参照電子状態計算および鉄五核錯体の密度汎関数計算2016

    • Author(s)
      柳井 毅
    • Organizer
      触媒・電池元素戦略研究拠点 第9回公開シンポジウム
    • Place of Presentation
      京都府京都市, 京大桂キャンパス
    • Related Report
      2016 Annual Research Report
    • Invited

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Published: 2016-04-21   Modified: 2022-05-20  

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