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Assembly of synthetic metabolon and establishment of structural basis of molecular design

Research Project

Project/Area Number 16H04732
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field System genome science
Research InstitutionNihon University

Principal Investigator

HIRANO NOBUTAKA  日本大学, 工学部, 准教授 (10409089)

Research Collaborator YOSHIKOSHI kensuke  日本大学, 工学部, 博士研究員 (10792054)
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥16,380,000 (Direct Cost: ¥12,600,000、Indirect Cost: ¥3,780,000)
Fiscal Year 2018: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2017: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2016: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Keywordsインテグラーゼ / ゲノム工学 / 合成生物学 / セルロソーム / タンパク質工学 / メタボロン / 酵素 / 遺伝子 / 微生物 / 酵素複合体 / 無細胞蛋白質合成
Outline of Final Research Achievements

Metabolon is a multi-enzyme complex assembled with metabolic enzymes that constitute a biosynthetic pathway. Clustering metabolic enzymes increases the in vivo local concentration of metabolic enzymes and accelerates flux of the substrates and products between metabolic enzymes, which is thought to enhance biosynthesis even under the condition of low expression levels of metabolic enzymes. In this study, we addressed to the improvement of the efficiency of biosynthesis by the assembly of synthetic metabolon, which is artificially assembled with utilizing interactions between the scaffolds and enzymes of plant biomass-degrading multi-enzyme complex. The biosynthetic pathways of polyketides were integrated into the Escherichia coli genome using a site-specific recombinase. Although the expression levels of metabolic enzymes decreased by the genomic integration of biosynthetic pathways, the results indicated that clustering metabolic enzymes can improve the efficiency of biosynthesis.

Academic Significance and Societal Importance of the Research Achievements

長鎖DNAが導入可能な大腸菌ゲノムを対象に、ポリケタイド生合成系の遺伝子導入を行った。生合成経路をゲノム遺伝子導入した場合、代謝酵素の発現量は低下するが、代謝酵素を人工的に複合体化することで、酵素発現量が少ない環境下であっても、生合成効率を改善できることを示した。本研究成果により、ゲノム遺伝子導入が必要な長鎖DNAから成る生合成系に対しても、代謝酵素の複合体化によって、効率的な物質生産が可能になると期待される。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (7 results)

All 2019 2018 2017 2016 Other

All Journal Article (3 results) (of which Peer Reviewed: 2 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (3 results) Remarks (1 results)

  • [Journal Article] Comparative Biochemical Analysis of Cellulosomes Isolated from Clostridium clariflavum DSM 19732 and Clostridium thermocellum ATCC 27405 Grown on Plant Biomass2019

    • Author(s)
      Shinoda, S., Kurosaki, M., Kokuzawa, T., Hirano, K., Takano, H., Ueda, K., Haruki, M., and Hirano, N.
    • Journal Title

      Applied Biochemistry and Biotechnology

      Volume: 187 Issue: 3 Pages: 994-1010

    • DOI

      10.1007/s12010-018-2864-6

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 植物バイオマスからの有用物質生産に向けた取り組み2019

    • Author(s)
      平野 展孝
    • Journal Title

      財界ふくしま

      Volume: 48 Pages: 119-125

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Enzymatic Diversity of the Clostridium thermocellum Cellulosome Is Crucial for the Degradation of Crystalline Cellulose and Plant Biomass.2016

    • Author(s)
      Hirano, K., Kurosaki, M., Nihei, S., Hasegawa, H., Shinoda, S., Haruki, M., and Hirano, N.
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 35709-35709

    • DOI

      10.1038/srep35709

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 好熱嫌気性細菌Clostridium thermocellum由来セルロソーム構成セルラーゼの結晶性セルロース分解に対する相乗効果2019

    • Author(s)
      齋藤 翼, 高橋 美帆, 富田 渓介, 篠田 優, 平野 勝紹, 春木 満, 平野 展孝
    • Organizer
      日本農芸化学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 大腸菌ゲノムに遺伝子導入された人工的な代謝酵素複合体によるクルクミンの生産2018

    • Author(s)
      吉越 健輔, 石澤 崇昭, 篠田 優, 平野 勝紹, 鮒 信学, 春木 満, 平野 展孝
    • Organizer
      2018年度日本農芸化学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 人工的な代謝酵素複合体のゲノム遺伝子導入によるポリケチド化合物の微生物生産2017

    • Author(s)
      吉越 健輔, 石澤 崇昭, 篠田 優, 平野 勝紹, 鮒 信学, 春木 満, 平野 展孝
    • Organizer
      日本農芸化学会
    • Place of Presentation
      京都女子大学(京都府京都市)
    • Year and Date
      2017-03-19
    • Related Report
      2016 Annual Research Report
  • [Remarks] 日本大学工学部生命応用化学科酵素学研究室

    • URL

      http://ch.ce.nihon-u.ac.jp/~hirano/index.html

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report 2016 Annual Research Report

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Published: 2016-04-21   Modified: 2020-03-30  

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