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Molecular mechanism of partner choice for recombination by two RecA homologs

Research Project

Project/Area Number 16H04742
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionOsaka University

Principal Investigator

Shinohara Akira  大阪大学, 蛋白質研究所, 教授 (00252578)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥17,420,000 (Direct Cost: ¥13,400,000、Indirect Cost: ¥4,020,000)
Fiscal Year 2018: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥5,850,000 (Direct Cost: ¥4,500,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2016: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Keywords相同組換え / RAD51 / 減数分裂 / DNA修復 / ゲノム安定化 / DMC1 / 染色体 / 組換え / がん / Rad51 / Dmc1 / RecAホモログ / パートナー選択 / 相同鎖検索
Outline of Final Research Achievements

Homologous recombination is essential for the maintenance of genome stability. RAD51 assembly on single-stranded (ss)DNAs is a crucial step in the recombination-dependent repair of DNA damage. The formation of the RAD51 filament is promoted by various RAD51-interacting proteins including RAD51 paralogues. However, the mechanisms underlying the differential control of RAD51 filament dynamics by these factors remain largely unknown. In this study, we report a new role for the human RAD51 paralog, SWSAP1, as a novel regulator of RAD51 assembly and disassembly. Swsap1-deficient cells show defects in DNA damage-induced RAD51 assembly during both mitosis and meiosis. Defective RAD51 assembly in SWSAP1-depleted cells is suppressed by the depletion of FIGNL1, which binds to RAD51 as well as SWSAP1. Purified FIGNL1 promotes the dissociation of RAD51 from ssDNAs. Taken together, our data suggest that SWSAP1 protects RAD51 filaments by antagonizing the anti-recombinase, FIGNL1.

Academic Significance and Societal Importance of the Research Achievements

本研究成果は相同組換えのアクセル役のSWSAP1と連携して機能する、ブレーキ役の新規タンパク質・遺伝子タンパク質・遺伝子(FIGNL1)を発見しました。SWSAP1, FIGNL1の2者のタンパク質の機能を明らかにすることで、生体内でのDNA同士の交換反応である相同組換えを適切に制御するメカニズムを解明しました。相同組換えの機能不全による発ガン率の上昇の原因解明や診断・治療方法の開発につながることが期待できます。また、今回発見した組換え因子を人工的に制御する技術の開発を通して、不妊の治療、ゲノム編集を介した遺伝子治療(置き換え)の最適化など幅広い貢献が期待できます。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (49 results)

All 2019 2018 2017 2016 Other

All Int'l Joint Research (13 results) Journal Article (11 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 11 results,  Open Access: 8 results,  Acknowledgement Compliant: 3 results) Presentation (19 results) (of which Int'l Joint Research: 14 results,  Invited: 12 results) Book (1 results) Remarks (5 results)

  • [Int'l Joint Research] FMI(スイス)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] U. of Davis(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] IISER Thiruvananthapuram(インド)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] IISER Thiruvananthapuram(インド)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] Friedrich Mischer Institute(スイス)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] University of Vienna(オーストリア)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] UC, Davis(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] New York University(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] Chung-Ang University(韓国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] IISER Thiruvanantharapuram(インド)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] University of Cambridge(英国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] University of Chicago(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2016 Annual Research Report
  • [Journal Article] A. Shinohara, Human RAD51 paralogue, SWSAP1, fosters RAD51 filament by regulating the anti-recombinase, FIGNL1 AAA+ ATPase.2019

    • Author(s)
      Matsuzaki, K., Kondo, S., Ishikawa, T., and A. Shinohara,
    • Journal Title

      Nature Communications

      Volume: 10 Issue: 1 Pages: 1407-1407

    • DOI

      10.1038/s41467-019-09190-1

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Meiosis-specific prophase-like pathway controls cleavage-independent release of cohesin by Wapl phosphorylation2019

    • Author(s)
      Challa Kiran、Fajish V Ghanim、Shinohara Miki、Klein Franz、Gasser Susan M.、Shinohara Akira
    • Journal Title

      PLOS Genetics

      Volume: 15 Issue: 1 Pages: 1007851-1007851

    • DOI

      10.1371/journal.pgen.1007851

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Meiotic prophase-like pathway for cleavage-independent removal of cohesin for chromosome morphogenesis2019

    • Author(s)
      Challa Kiran、Shinohara Miki、Shinohara Akira
    • Journal Title

      Current Genetics

      Volume: 印刷中 Issue: 4 Pages: 817-827

    • DOI

      10.1007/s00294-019-00959-x

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Meiosis‐specific cohesin component, Rec8, promotes the localization of Mps3 SUN domain protein on the nuclear envelope2018

    • Author(s)
      Bommi Jagadeeswara Rao、Rao Hanumanthu Bala Durga Prasada、Challa Kiran、Higashide Mika、Shinmyozu Kaori、Nakayama Jun‐ichi、Shinohara Miki、Shinohara Akira
    • Journal Title

      Genes to Cells

      Volume: 24 Issue: 1 Pages: 94-106

    • DOI

      10.1111/gtc.12653

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular Camouflage of Plasmodium falciparum Merozoites by Binding of Host Vitronectin to P47 Fragment of SERA52018

    • Author(s)
      Tougan T, Edula JR, Takashima E, Morita M, Shinohara M, Shinohara A, Tsuboi T, Horii T.
    • Journal Title

      Sci Rep.

      Volume: 22 Issue: 1 Pages: 5052-5052

    • DOI

      10.1038/s41598-018-23194-9

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Modulating crossover frequency and interference for obligate crossovers in Saccharomyces cerevisiae meiosis.2017

    • Author(s)
      Chakrabotty, P., Ajith, VP.., Chen, K., Duttta, A., Krishnaprasad G.N., Tekkedil, M.M., Shinohara, A., Steinmetz, L. M., and Nishant, K.T.
    • Journal Title

      G3(Bethesda)

      Volume: 印刷中 Issue: 5 Pages: 1511-1524

    • DOI

      10.1534/g3.117.040071

    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] RFTS-dependent negative regulation of Dnmt1 by nucleosome structure and histone tails.2017

    • Author(s)
      Mishima Y, Brueckner L, Takahashi S, Kawakami T, Arita K, Oka S, Otani J, Hojo H, Shirakawa M, Shinohara A, Watanabe M, Suetake I
    • Journal Title

      FEBS J.

      Volume: 284 Issue: 20 Pages: 3455-3469

    • DOI

      10.1111/febs.14205

    • NAID

      120006537075

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The Paf1 Complex Shapes the Landscape of Double-strand Breaks along Meiotic Chromosomes in Saccharomyces cerevisiae2016

    • Author(s)
      Santosh, G. K., Patel, K.J., Colletti M.M., Sasanuma, H., Shinohara, M., Hochwagen, A., and A. Shinohara
    • Journal Title

      Genetics

      Volume: 202 Issue: 2 Pages: 497-512

    • DOI

      10.1534/genetics.115.177287

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Chromosome synapsis alleviates Mek1-dependent suppression of meiotic DNA repair.2016

    • Author(s)
      Subramanian, V.V., MacQueen, A. J., Vader, G., Shinohara, M., Borde, V., Shinohara, A. and A. Hochwagen
    • Journal Title

      Current Biology

      Volume: 14 Issue: 2 Pages: e1002369-e1002369

    • DOI

      10.1371/journal.pbio.1002369

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Rad61/Wpl1(Wapl), a cohesin regulator, controls chromosome compaction during meiosis.2016

    • Author(s)
      Challa, KK., Lee, MS., Shinohara, M., Kim, K.m and A. Shinohara.
    • Journal Title

      Nucleic Acids Research

      Volume: in press Issue: 7 Pages: 3190-3203

    • DOI

      10.1093/nar/gkw034

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Gamma-irradiated quiescent cells repair directly induced DSBs but accumulate persistent DSBs during subsequent DNA replication2016

    • Author(s)
      Minakawa, Y., Atsumi, Y., Shinohara, A., Murakami, Y., Yoshioka, K.I.
    • Journal Title

      Genes-to-Cells

      Volume: 21 Issue: 7 Pages: 789-797

    • DOI

      10.1111/gtc.12381

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Presentation] Human RAD51 paralog, SWSAP1, promotes RAD51 assembly by regulating the anti-recombinase, FIGNL1 AAA+ ATPase2019

    • Author(s)
      Akira Shinohara
    • Organizer
      U of Vienna meeting on Emerging Concepts in Chromosome Biology, Vienna Austria
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Human RAD51 paralog, SWSAP1, promotes RAD51 assembly by regulating the anti-recombinase, FIGNL1 AAA+ ATPase2019

    • Author(s)
      Akira Shinohara
    • Organizer
      Keystone symposium on DNA Replication and Genome Instability: From Mechanism to Disease, Snowbird, USA
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Control of RAD51 filament assembly/disassembly by the RAD51 paralog and anti-recombinase2018

    • Author(s)
      Akira Shinohara
    • Organizer
      Chromosome stability meeting, Bangalore, India
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Control of RAD51 filament assembly/disassembly by the RAD51 paralog and anti-recombinase2018

    • Author(s)
      Akira Shinohara
    • Organizer
      Mini-symposium on chromosome Biology, Taipei, Taiwan
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Control of Rad51-assembly and disassembly by Rad51 paralogues and anti-recombinases2018

    • Author(s)
      Akira Shinohara
    • Organizer
      Genome biology 2018: Mechanisms in health and diseases, Bangalore, India
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Control of Rad51-assembly and disassembly by Rad51 paralogues and anti-recombinases2018

    • Author(s)
      Akira Shinohara
    • Organizer
      Abcam meeting on Mechanism of recombination, May 19-23, London UK
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Meiotic prophase pathway of cleavage-independent removal of cohesin from chromosomes during late prophase I2018

    • Author(s)
      Akira Shinohara
    • Organizer
      Gordon Research Conference on Meiosis, June 10-15, 2016, New London, USA
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] RAD51パラログと新規アンチリコンビナーゼによる相同組換え制御の解析2018

    • Author(s)
      松嵜健一郎、石川達也、近藤静香、篠原彰
    • Organizer
      日本遺伝学会 第90回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] RAD51 パラログと新規アンチリコンビナーゼによる相同組換え制御の解析2018

    • Author(s)
      松嵜健一郎、石川達也、近藤静香、篠原彰
    • Organizer
      日本放射線影響学会第61回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] RAD51 paralogue SWSAP1 promotes homologous recombination by protecting RAD51 filament from a novel antirecombinase FIGNL12018

    • Author(s)
      Matsuzaki Kenichiro、Kondo Shizuka、Ishikawa Tatsuya、Shinohara Akira
    • Organizer
      3R & 3C Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Roles of PLK-dependent Phosphorylation of a Cohesin Regulator, Rad61/Wpl1 (WAPL), during Yeast Meiosis2018

    • Author(s)
      Faiza Az Zahra, Kiran Challa, Akira Shinohara
    • Organizer
      日本遺伝学会 第90回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 減数分裂期におけるマウスRAD51パラログSwsap1の機能解析2018

    • Author(s)
      近藤 静香、松嵜 健一郎、 篠原 彰
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] A New Role of Srs2 DNA helicase, anti-recombinase, during Yeast Meiosis2018

    • Author(s)
      Hana Subhan Memon Sakurai, Hiroyuki Sasanuma, Akira Shinohara
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Control of Rad51/Dmc1 assembly by Rad51 mediators2018

    • Author(s)
      Shinohara, A.
    • Organizer
      Abcam meeting on Mechanism of recombination, London UK
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Meiosis-specific prophase pathway for cleavage-independent removal of cohesin2018

    • Author(s)
      Shinohara, A.
    • Organizer
      Gordon Research Conference on Meiosis, NH, USA
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Control of Rad51/Dmc1 assembly by Rad51 mediators2017

    • Author(s)
      Shinohara, A.
    • Organizer
      FASEB meeting on recombination & genome rearrangement, CO, USA
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Prophase pathway for removal of a meiosis-specific cohesin from arms of chromosomes during late prophase I of meiosis2016

    • Author(s)
      Shinohara A.
    • Organizer
      Chromosome stability meeting
    • Place of Presentation
      Trivandrum, India
    • Year and Date
      2016-12-13
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Prophase pathway for removal of a meiosis-specific cohesin from arms of chromosomes during late prophase I of meiosis2016

    • Author(s)
      Shinohara A.
    • Organizer
      Gordon Research Conference on Meiosis,
    • Place of Presentation
      New London, NH, USA
    • Year and Date
      2016-06-26
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Control of meiotic recombination by Rad51/Dmc1 mediators and DNA helicases2016

    • Author(s)
      Shinohara A.
    • Organizer
      Abacam meeting on Mechanism of recombination
    • Place of Presentation
      Alicante, Spain
    • Year and Date
      2016-05-19
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Book] どうして心臓は動き続けるの?2018

    • Author(s)
      大阪大学蛋白質研究所
    • Total Pages
      128
    • Publisher
      化学同人
    • ISBN
      9784759819816
    • Related Report
      2018 Annual Research Report
  • [Remarks] ゲノムー染色体機能研究室ホームページ

    • URL

      http://www.protein.osaka-u.ac.jp/genome/index.html

    • Related Report
      2018 Annual Research Report
  • [Remarks] Press Release: 遺伝子の入れ替えをコントロールするメカニズムを解明

    • URL

      http://www.protein.osaka-u.ac.jp/achievement/pressrelease190404

    • Related Report
      2018 Annual Research Report
  • [Remarks] Press Release: 世界初!配偶子の異数体形成を抑える仕組みを解明

    • URL

      http://www.protein.osaka-u.ac.jp/achievement/pressrelease190111

    • Related Report
      2018 Annual Research Report
  • [Remarks] 研究室HP

    • URL

      http://www.protein.osaka-u.ac.jp/genome/index.html

    • Related Report
      2017 Annual Research Report
  • [Remarks] 大阪大学蛋白質研究所ゲノム~染色体機能研究室

    • URL

      http://www.protein.osaka-u.ac.jp/genome/index.html

    • Related Report
      2016 Annual Research Report

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Published: 2016-04-21   Modified: 2022-01-28  

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