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Molecular analyses of tRNA mimicry proteins for alternative mRNA decoding in protein synthesis

Research Project

Project/Area Number 16H04760
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

Ito Koichi  東京大学, 大学院新領域創成科学研究科, 教授 (10262073)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥17,810,000 (Direct Cost: ¥13,700,000、Indirect Cost: ¥4,110,000)
Fiscal Year 2018: ¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2017: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2016: ¥8,840,000 (Direct Cost: ¥6,800,000、Indirect Cost: ¥2,040,000)
Keywordsリボソーム / 翻訳制御 / 品質管理 / 遺伝暗号 / 分子擬態 / tRNA分子擬態 / 翻訳終結
Outline of Final Research Achievements

In addition to the nucleic acid molecule tRNA, which is an adapter molecule in genetic decoding for sense codons, for decoding mRNA by ribosomes in protein synthesis, a set of tRNA mimicry proteins are known, such as for the decoding of translation termination codon and for the rescue of ribosomes stalled on aberrant mRNA. In this study, by comparative analysis of both eukaryotic and bacterial tRNA mimicry proteins, we have demonstrated the novel functionality of a eukaryote specific GTP binding protein, Ski7. We also succeeded in finding novel ribosome rescue mechanism including the poly peptide-chain release factors (eRF1/eRF3) that has not been reported so far in eukaryotes.

Academic Significance and Societal Importance of the Research Achievements

mRNAからのタンパク質合成の高次機能発現制御機構の解明は、生命に普遍的な分子機構の理解のみならず、新規機能性タンパク質の人工合成方法の開発や癌をはじめとする多くの遺伝疾患の発症機構の解明や創薬・治療方法の開発に必須な知見となる。本研究成果は、細胞内におけるタンパク質合成におけるリボソームの翻訳反応に関わりその高次機能発現への拡張を可能にするtRNA擬態タンパク質による高次機能発現機構の分子メカニズムの解明により、その医工学的応用研究への手がかりを与えた。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (8 results)

All 2018 2017 2016

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (5 results)

  • [Journal Article] Misdecoding of Rare CGA Codon by Translation Termination Factors, eRF1/eRF3, Suggests Novel Class of Ribosome Rescue Pathway in S. cerevisiae2018

    • Author(s)
      Miki Wada, Koichi Ito
    • Journal Title

      The FEBS Journal

      Volume: 286 Issue: 4 Pages: 788-802

    • DOI

      10.1111/febs.14709

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Tight interaction of eEF2 in the presence of Stm1 on ribosome.2018

    • Author(s)
      Hayashi, H., Nagai, R., Abe, T., Wada, M., Ito, K. & Takeuchi-Tomita, N.
    • Journal Title

      Journal of Biochemistry

      Volume: 163 Issue: 3 Pages: 177-185

    • DOI

      10.1093/jb/mvx070

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mutations in the G-domain of Ski7 cause specific dysfunction in non-stop decay2016

    • Author(s)
      Wataru Horikawa, Kei Endo, Miki Wada, Koichi Ito
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1

    • DOI

      10.1038/srep29295

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 出芽酵母におけるCGAアルギニンコドン誤解読とリボソームレスキュー2018

    • Author(s)
      和田 美紀、伊藤 耕一
    • Organizer
      第41回日本分子生物学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] RNA結合タンパク質のmRNA結合に依存する新奇な翻訳開始反応の分子メカニズム解明2018

    • Author(s)
      堀江 史博、遠藤 慧、伊藤 耕一
    • Organizer
      第41回日本分子生物学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 翻訳終結因子によるCGAセンスコドンの解読の意義2017

    • Author(s)
      和田 美紀、伊藤 耕一
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] タンパク質とmRNAの結合に依存する新奇な翻訳開始反応の成立要件検証と一般化2017

    • Author(s)
      堀江 史博、遠藤 慧、伊藤 耕一
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] センスコドンCGAの翻訳終結因子eRF1の誤解読はリボソーム停滞の解消に機能し得る2016

    • Author(s)
      和田美紀, 伊藤耕一
    • Organizer
      日本分子生物学会大会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report

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Published: 2016-04-21   Modified: 2020-03-30  

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