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Functional mechanism of the GTP/ATP-binding proteins that regulate bacterial flagellar number.

Research Project

Project/Area Number 16H04774
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionNagoya University

Principal Investigator

Kojima Seiji  名古屋大学, 理学研究科, 准教授 (70420362)

Project Period (FY) 2016-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥17,290,000 (Direct Cost: ¥13,300,000、Indirect Cost: ¥3,990,000)
Fiscal Year 2019: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2018: ¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2017: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2016: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Keywords細菌べん毛 / タンパク質局在 / ATPase / GTPase / FlhF / FlhG / HubP / SflA
Outline of Final Research Achievements

Vibrio alginolyticus has a single polar flagellum used for swimming motility. We found that FlhG, the negative regulator for flagellar number and ATPase, exists as a monomer in the presence of ATP and do not form dimer as seen for its paralog MinD. We suggest that an ATP-bound FlhG localizes at cell pole via the membrane protein HubP, and then directly inhibits FlhF, the positive regulator for flagellar number. On the other hand, FlhF intrinsically localizes at cell pole. We found that a GTP-bound FlhF forms dimer and its GTPase activity was stimulated by the N-terminal region of FlhG. Our current model proposes that the nucleotide-bound active states of FlhF and FlhG function at cell pole, and their regulatory activities to determine flagellar number is strictly balanced at pole, so as to generate only a single polar flagellum.

Academic Significance and Societal Importance of the Research Achievements

機能部位への生体分子の適量配置は、生命機能の正常な発現と維持に必須で、あらゆる生物に見られる普遍的生命現象である。細菌べん毛は適量適所配置により運動能を実現することや、細菌の特色である増殖が早く様々な研究手法が適用可能であることから、優れた研究対象である。我々はべん毛形成を制御する正と負の因子の生化学活性と細胞内での振る舞い(極局在)を検討し、遺伝子発現レベルでの制御だけでなく、翻訳後の制御機構が因子の生化学活性と共役して細胞の極で起こることを見出した。加えて細胞の極が細胞内において特殊な状況を生み出し、超分子複合体の構築に適切な環境を与えていることを見出した点にも意義がある。

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (36 results)

All 2020 2019 2018 2017 2016

All Journal Article (9 results) (of which Peer Reviewed: 9 results,  Open Access: 4 results,  Acknowledgement Compliant: 1 results) Presentation (25 results) (of which Int'l Joint Research: 5 results,  Invited: 2 results) Book (2 results)

  • [Journal Article] Characterization of the MinD/ParA-type ATPase FlhG in Vibrio alginolyticus and implications for function of its monomeric form.2020

    • Author(s)
      Kojima S, Imura Y, Hirata H, Homma M.
    • Journal Title

      Genes to Cells

      Volume: 25 Issue: 4 Pages: 279-287

    • DOI

      10.1111/gtc.12754

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Regulation of the single polar flagellar biogenesis.2020

    • Author(s)
      Kojima S, Terashima H, Homma M.
    • Journal Title

      Biomolecules

      Volume: 10 Issue: 4 Pages: 533-533

    • DOI

      10.3390/biom10040533

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Assembly mechanism of a supramolecular MS-ring complex to initiate bacterial flagellar biogenesis in Vibrio species.2020

    • Author(s)
      Terashima H, Hirano K, Inoue Y, Tokano T, Kawamoto A, Kato T, Yamaguchi E, Namba K, Uchihashi T, Kojima S, Homma M.
    • Journal Title

      Journal of Bacteriology

      Volume: - Issue: 16

    • DOI

      10.1128/jb.00236-20

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structure of the periplasmic domain of SflA involved in spatial regulation of the flagellar biogenesis of Vibrio reveals a TPR/SLR -like fold.2019

    • Author(s)
      Sakuma M, Nishikawa S, Inaba S, Nishigaki T, Kojima S, Homma M, Imada K.
    • Journal Title

      Journal of Biochemistry

      Volume: 印刷中 Issue: 2 Pages: 197-204

    • DOI

      10.1093/jb/mvz027

    • NAID

      40021974932

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Biochemical analysis of GTPase FlhF which controls the number and position of flagellar formation in marine Vibrio.2018

    • Author(s)
      Kondo S, Imura Y, Mizuno A, Kojima S, Homma M.
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1

    • DOI

      10.1038/s41598-018-30531-5

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Localization and domain characterization of the SflA regulator of flagellar formation in Vibrio alginolyticus.2017

    • Author(s)
      Inaba S, Nishigaki T, Takekawa N, Kojima S, Homma M.
    • Journal Title

      Genes to Cells

      Volume: 7 Issue: 7 Pages: 619-629

    • DOI

      10.1111/gtc.12501

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Analysis of the GTPase motif of FlhF in the control of the number and location of polar flagella in <i>Vibrio alginolyticus</i>2017

    • Author(s)
      Kondo S, Homma M, Kojima S.
    • Journal Title

      Biophysics and Physicobiology

      Volume: 14 Issue: 0 Pages: 173-181

    • DOI

      10.2142/biophysico.14.0_173

    • NAID

      130006243615

    • ISSN
      2189-4779
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] HubP, a polar landmark protein, regulates flagellar number by assisting in the proper polar localization of FlhG in Vibrio alginolyticus.2016

    • Author(s)
      Takekawa N, Kwon S, Nishioka N, Kojima S, Homma M.
    • Journal Title

      J Bacteriol.

      Volume: 198(22) Issue: 22 Pages: 3091-3098

    • DOI

      10.1128/jb.00462-16

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Studies on the mechanism of bacterial flagellar rotation and the flagellar number regulation2016

    • Author(s)
      小嶋誠司
    • Journal Title

      Nippon Saikingaku Zasshi

      Volume: 71 Issue: 3 Pages: 185-197

    • DOI

      10.3412/jsb.71.185

    • NAID

      130005261501

    • ISSN
      0021-4930, 1882-4110
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Presentation] 海洋性ビブリオ菌のべん毛本数を負に制御する因子FlhGのATP結合と構造変化の関係2019

    • Author(s)
      小嶋誠司、伊村芳野、 平田ひかる、本間道夫
    • Organizer
      第83回日本生化学学会中部支部会
    • Related Report
      2019 Annual Research Report
  • [Presentation] The polar localization of FliF, composing MS-ring, is promoted by FlhF in Vibrio alginolyticus2019

    • Author(s)
      井上祐菜、小嶋誠司、平野圭一、寺島浩行、本間道夫
    • Organizer
      第57回日本生物物理学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 海洋性ビブリオ菌のべん毛本数を負に制御する因子FlhGの生化学的性質と機能の解析2019

    • Author(s)
      小嶋誠司、 伊村芳野、水野彬、平田ひかる、本間道夫
    • Organizer
      第53回ビブリオシンポジウム/第56回日本細菌学会中部支部総会
    • Related Report
      2019 Annual Research Report
  • [Presentation] FLAGELLAR NUMBER REGULATION BY GTPASE FLHF AND ATPASE FLHG IN VIBRIO ALGINOLYTICUS2019

    • Author(s)
      Seiji Kojima, Yoshino Imura, Shota Kondo, Akira Mizuno, Michio Homma
    • Organizer
      BLAST XV Conference
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 海洋性ビブリオ菌のべん毛本数制御因子FlhGのATP結合と構造変化の関係2019

    • Author(s)
      伊村芳野、小嶋誠司、本間道夫
    • Organizer
      平成30年度生物物理学会中部支部講演会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 細菌べん毛の本数と形成位置を制御するFlhFの精製と生化学的解析2018

    • Author(s)
      近藤翔太、伊村芳野、水野彬、小嶋誠司、本間道夫
    • Organizer
      第82回日本生化学学会中部支部会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Role of N-terminal region of FlhG in polar flagellar number regulation in Vibrio alginolyticus2018

    • Author(s)
      小嶋 誠司、水野 彬、本間 道夫
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] The role of ATPase motif and ATPase activity of FlhG in flagellar number regulation at cell pole of Vibrio alginolyticus2018

    • Author(s)
      伊村 芳野、小嶋 誠司、本間 道夫
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Role of FlhF localized at cell pole on initiating the polar flagellar formation of Vibrio alginolyticus2018

    • Author(s)
      井上 祐菜、小嶋 誠司、本間 道夫
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 海洋性ビブリオ菌極べん毛の本数を制御するFlhFのGTPase活性とべん毛極形成機構2018

    • Author(s)
      小嶋誠司、本間道夫
    • Organizer
      第52回ビブリオシンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] 海洋性ビブリオ菌極べん毛マスター制御因子FlaKの生化学的性質とべん毛本数制御における役割2018

    • Author(s)
      小嶋誠司、本間道夫
    • Organizer
      第44回日本生体エネルギー研究会
    • Related Report
      2018 Annual Research Report
  • [Presentation] べん毛本数制御におけるビブリオ菌FlhGのDQAxxLRモチーフの役割2017

    • Author(s)
      水野彬、小嶋誠司、本間道夫
    • Organizer
      第90回日本細菌学会総会
    • Place of Presentation
      仙台国際センター
    • Year and Date
      2017-03-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] Regulation of the Polar Flagellar Number and Placement in Marine Bacterium Vibrio alginolyticus2017

    • Author(s)
      Seiji Kojima
    • Organizer
      International meeting of the Microbiological Society of Korea
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 海洋性ビブリオ菌の極べん毛本数と形成位置を制御するFlhFのランダム変異導入による解析2017

    • Author(s)
      近藤翔太、小嶋誠司、本間道夫
    • Organizer
      第81回日本生化学会中部支部会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Mutational and biochemical analyses of FlhF and FlhG, regulators of the polar flagellar number and placement in marine bacterium Vibrio alginolyticus2017

    • Author(s)
      Seiji Kojima, Shota Kondo, Hikaru Hirata, Akira Mizuno, Yoshino Imura and Michio Homma
    • Organizer
      The 16th Awaji International Forum on Infection and Immunity
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Purification of FlhF to detect the GTPase activity effecting on the number and location of the polar flagellum of Vibrio alginolyticus2017

    • Author(s)
      近藤 翔太、本間 道夫、小嶋 誠司
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ビブリオ菌の FlhG の N 末端領域 DQAxxLR モチーフのべん毛本数制御機構の解析2017

    • Author(s)
      水野彬、本間道夫、小嶋誠司
    • Organizer
      第54回日本細菌学会中部支部総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Roles of nucleotide-binding proteins for regulation of flagellar number and positioning in the marine bacterium Vibrio alginolyticus2017

    • Author(s)
      Seiji Kojima
    • Organizer
      IGER International Symposium on Cell Surface Structures and Functions 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] ビブリオ菌極べん毛本数を負に制御するFlhGの生化学的性質とN末端の役割2017

    • Author(s)
      小嶋誠司、水野彬、伊村芳野、平田ひかる、本間道夫
    • Organizer
      日本生体エネルギー研究会第43回討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 細胞プロセス制御に関与するSIMIBI型タンパク質FlhFのGTPase活性とべん毛形成制御2017

    • Author(s)
      近藤翔太、水野彬、本間道夫、小嶋誠司
    • Organizer
      日本生体エネルギー研究会第43回討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ビブリオ菌極べん毛の正の本数制御因子FlhFによるべん毛形成開始機構の解析2017

    • Author(s)
      井上 祐菜、小嶋 誠司、本間 道夫
    • Organizer
      2017年度生物物理学会中部支部会
    • Related Report
      2017 Annual Research Report
  • [Presentation] FlhFがもつGTPaseモチーフへの変異によるビブリオ菌極べん毛数と位置への影響2016

    • Author(s)
      近藤翔太、本間道夫、小嶋誠司
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] 細菌べん毛の本数と形成位置を制御するFlhFの ランダム変異導入による解析2016

    • Author(s)
      近藤翔太、小嶋誠司、本間道夫
    • Organizer
      第53回日本細菌学会中部支部総会
    • Place of Presentation
      日本歯科大学新潟生命歯学部
    • Year and Date
      2016-10-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] HubP, a polar landmark protein, regulates flagellar number by assisting in the proper polar localization of FlhG in Vibrio alginolyticus2016

    • Author(s)
      Seiji Kojima, Norihiro Takekawa, Soojin Kwon, Noriko Nishioka, and Michio Homma
    • Organizer
      Gordon Research Conference "Bacterial Cell Surfaces"
    • Place of Presentation
      Mount Snow Resort
    • Year and Date
      2016-06-26
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ATP依存的にべん毛本数を負に制御するFlhGタンパク質の性質2016

    • Author(s)
      平田ひかる、本間道夫、小嶋誠司
    • Organizer
      第80回日本生化学会中部支部例会
    • Place of Presentation
      三重大学
    • Year and Date
      2016-05-21
    • Related Report
      2016 Annual Research Report
  • [Book] 実験医学12月号 特集「少数精製物学ってなんだ? 少数で製造を制御する」2017

    • Author(s)
      今田勝巳、小嶋誠司
    • Total Pages
      136
    • Publisher
      羊土社
    • Related Report
      2017 Annual Research Report
  • [Book] 少数性生物学2017

    • Author(s)
      永井健治/冨樫祐一(編)
    • Total Pages
      178
    • Publisher
      日本評論社
    • Related Report
      2016 Annual Research Report

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Published: 2016-04-21   Modified: 2021-02-19  

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