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Heat tolerance mechanisms in rice spikelet fertility using real-time single pollen omics approaches

Research Project

Project/Area Number 16H04870
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Crop production science
Research InstitutionNational Agriculture and Food Research Organization

Principal Investigator

Hakata Makoto  国立研究開発法人農業・食品産業技術総合研究機構, 九州沖縄農業研究センター, 上級研究員 (80450336)

Co-Investigator(Kenkyū-buntansha) 和田 博史  国立研究開発法人農業・食品産業技術総合研究機構, 九州沖縄農業研究センター, 上級研究員 (40533146)
Project Period (FY) 2016-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥17,030,000 (Direct Cost: ¥13,100,000、Indirect Cost: ¥3,930,000)
Fiscal Year 2019: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2018: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2016: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Keywords高温不稔 / 花粉 / イネ / オミクス解析 / プレッシャープローブエレクトロスプレー質量分析 / 遺伝子組換え
Outline of Final Research Achievements

In this project, we examined heat tolerance mechanisms in rice spikelet fertility by using real-time single pollen metabolomics and gene expression analysis. Using picolitre pressure-probe-electrospray-ionization mass spectrometry (picoPPESI-MS) to directly determine the metabolites and microarray analysis in the single mature pollen grains of two cultivars that exhibited different heat tolerance. The metabolome analysis detected varietal differences in phosphatidylinositol (PI) in mature pollen, together with other 106 metabolites including cysteine. Greater PI content was detected in heat-tolerant cultivar pollen regardless of the treatment, but not for heat-susceptible cultivar pollen. Microarray analysis has also suggested the importance of expression of lipolytic enzyme-encoded genes at high temperature. Therefore, we conclude that the observed active synthesis of PI prior to germination may be an important factor for maintaining spikelet fertility under heat conditions.

Academic Significance and Societal Importance of the Research Achievements

温暖化の進行に伴い、近年散見される高温不稔の発生頻度の増加により米の大幅な収量不安定化が危惧されており、食糧の安定供給の観点から、早期に高温不稔耐性品種を育成することが必須である。しかしながら、高温不稔を誘導する生理的メカニズムについては依然として不明な点が多く、高温不稔の耐性向上を目指した品種開発には至っていない。本研究は高温処理下のイネ1花粉を対象にした分析により高温下での花粉の機能維持に関する分子メカニズムを明らかにした点で学術的意義は大きく、今後の耐性品種作出が期待される。

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (13 results)

All 2020 2019 2018 2017 2016 Other

All Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (9 results) (of which Int'l Joint Research: 5 results,  Invited: 5 results) Book (1 results) Remarks (1 results)

  • [Journal Article] On-site single pollen metabolomics reveals varietal differences in phosphatidylinositol synthesis under heat stress conditions in rice2020

    • Author(s)
      Wada H, Hatakeyama Y, Nakashima T, Nonami H, Erra-Balsells R, Hakata M, Nakata K, Hiraoka K, Onda Y, Nakano H
    • Journal Title

      Scientific Reports

      Volume: 10(1) Issue: 1 Pages: 2013-2013

    • DOI

      10.1038/s41598-020-58869-9

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Development of a new heat tolerance assay system for rice spikelet sterility.2017

    • Author(s)
      Hakata M, Wada H, Masumoto-Kubo C, Tanaka R, Sato H, Morita S
    • Journal Title

      Plant Methods

      Volume: 13 Issue: 1 Pages: 1-8

    • DOI

      10.1186/s13007-017-0185-3

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] 水稲高温不稔耐性評価システムの構築と高温不稔に関与する遺伝要因の解明2018

    • Author(s)
      羽方誠
    • Organizer
      日本育種学会第13回九州沖縄地区談話会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Development of a heat tolerance assay system for rice spikelet sterility in phytotrons2018

    • Author(s)
      Hakata M, Wada H, Masumoto-Kubo C, Tanaka R, Sato H, Morita S, Nakano H
    • Organizer
      The 18th Asian Agricultural Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of a heat tolerance assay for rice spikelet sterility in phytotrons2018

    • Author(s)
      Hakata M
    • Organizer
      NARO-FFTC-MARCO Symposium 2018: Climate Smart Agriculture for the Small-Scale Farmers in the Asian and Pacific Region
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 制御環境下の細胞生理学的アプローチによる水稲高温障害の研究展望2018

    • Author(s)
      和田博史
    • Organizer
      日本農業気象学会2018年全国大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 気候変動下における水稲の安定生産に向けて-高温障害対策を中心とする研究開発と今後の課題-2018

    • Author(s)
      和田博史
    • Organizer
      日本農業気象学会75周年記念大会公開シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Development of the on-site Live cell metabolomics performable in controlled environment.2017

    • Author(s)
      Wada H, Nonami H, Nakata K, Nakashima T, Hatakeyama Y, Nakano H, Onda Y, Hiraoka K, Hakata M, Morita S
    • Organizer
      Society for Experimental Biology 2017 Annual Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Phosphoinositides in rice pollen grains associated with spikelet fertility.2017

    • Author(s)
      Wada H, Nakashima T, Hakata M, Hatakeyama Y, Nakata K, Nonami H, Erra-Balsells R, Hiraoka K, Nakano H
    • Organizer
      2017 CIGR World Workshop in Matsuyama
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] フェーンに伴うリング状乳白粒の発生機構:オンサイト・セルスペシフィック解析による水稲高温障害研究への応用2016

    • Author(s)
      和田博史,羽方誠,中野洋,野並浩,森田敏
    • Organizer
      日本農業気象学会九州支部・日本生物環境工学会九州支部合同大会シンポジウム
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Mechanisms of foehn-induced chalky ring formation in rice: Use of the on-site cell-specific analytical method and practical applications.2016

    • Author(s)
      Wada H, Hakata M, Nonami H, Nakano H, Morita S
    • Organizer
      IRRI-JIRCAS-NARO Symposium
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Book] New approaches combined with environmental control for enhancing heat-tolerant rice breeding in japan. In: Iizumi T., Hirata R., Matsuda R. (eds) Adaptation to climate change in agriculture.2019

    • Author(s)
      Wada Hiroshi
    • Total Pages
      15
    • Publisher
      Springer Nature
    • Related Report
      2019 Annual Research Report
  • [Remarks] 水稲の開花期における高温不稔耐性を再現良く評価できるシステム

    • Related Report
      2018 Annual Research Report

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Published: 2016-04-21   Modified: 2021-02-19  

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