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Comprehensive analysis of intestinal colonization factors derived from gut microbes

Research Project

Project/Area Number 16H04901
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionKeio University

Principal Investigator

Fukuda Shinji  慶應義塾大学, 政策・メディア研究科(藤沢), 特任教授 (80435677)

Co-Investigator(Kenkyū-buntansha) 宮内 栄治  国立研究開発法人理化学研究所, 生命医科学研究センター, 基礎科学特別研究員 (60634706)
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥17,680,000 (Direct Cost: ¥13,600,000、Indirect Cost: ¥4,080,000)
Fiscal Year 2018: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥7,540,000 (Direct Cost: ¥5,800,000、Indirect Cost: ¥1,740,000)
Keywords腸内細菌 / 代謝物質 / メタゲノム / メタボローム / メタボロゲノミクス / 相互作用 / 微生物社会 / 定着 / 腸内エコシステム / 腸内環境 / 腸内生態系 / 共生 / 統合オミクス
Outline of Final Research Achievements

The gut microbiota form a highly complex ecological community together with host intestinal cells. The so-called gut ecosystem has a profound influence on human physiology, immunology, and nutrition. It has been reported that imbalance in the structure of gut ecosystem could be a risk factor in human disorders including not merely gut-associated diseases but also systemic disorders. However, the molecular mechanisms of the formation of complex intestinal microbial community remain obscure. To this end, we firstly established a highly integrated metagenomic and metabolomic approaches, metabologenomics, and found that the interaction between host-derived IgA and number of colonized bacteria are important to form initial state of gut ecosystem, indicating that host-microbial crosstalk is one of the key systems to form complex microbial community in gut.

Academic Significance and Societal Importance of the Research Achievements

本研究の意義は、腸内細菌が有する腸内環境定着因子を網羅的に解析し、腸内微生物共生社会形成機構を理解することで、腸内細菌叢のバランスの乱れが素因になる疾患の先制医療を目指した基盤技術の礎となると共に、予防医学や健康増進の見地に立ったサプリメントや機能性食品開発にも応用でき、それらの摂取によるセルフメディケーションにもつながると考えられる。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (29 results)

All 2018 2017 2016 Other

All Int'l Joint Research (2 results) Journal Article (6 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 5 results,  Open Access: 4 results) Presentation (19 results) (of which Int'l Joint Research: 3 results,  Invited: 19 results) Patent(Industrial Property Rights) (2 results)

  • [Int'l Joint Research] University of Michigan Medical School(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] University of Michigan Medical School(米国)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Canagliflozin reduces plasma uremic toxins and alters the intestinal microbiota composition in a chronic kidney disease mouse model2018

    • Author(s)
      Mishima Eikan、Fukuda Shinji、Kanemitsu Yoshitomi、Saigusa Daisuke、Mukawa Chikahisa、Asaji Kei、Matsumoto Yotaro、Tsukamoto Hiroki、Tachikawa Tatsuki、Tsukimi Tomoya、Fukuda Noriko N、Ito Sadayoshi、Soga Tomoyoshi、Tomioka Yoshihisa、Abe Takaaki
    • Journal Title

      Am J Physiol Renal Physiol

      Volume: 315 Issue: 4 Pages: 824-833

    • DOI

      10.1152/ajprenal.00314.2017

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Neonatal acquisition of Clostridia species protects against colonization by bacterial pathogens2017

    • Author(s)
      Kim, YG., Sakamoto, K., Seo, SU., Pickard, JM., Gillilland, M.G. 3rd, Pudlo, NA., Hoostal, M., Li, X., Feehley, T., Stefka, AT., Schmidt, TM., Martens, EC., Fukuda, S., Inohara, N., Nagler, CR., Nunez, G.
    • Journal Title

      Science

      Volume: 356 Issue: 6335 Pages: 315-319

    • DOI

      10.1126/science.aag2029

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Evaluation of the impact of gut microbiota on uremic solute accumulation by a CE-TOFMS-based metabolomics approach2017

    • Author(s)
      †Mishima, E., †Fukuda, S. (†equally contributed), Mukawa, C., Yuri, A., Kanemitsu, Y., Matsumoto, Y., Akiyama, Y., Fukuda, NN., Tsukamoto, H., Asaji, K., Shima, H., Kikuchi, K., Suzuki, T., Tomioka, Y., Soga, T., Ito, S., Abe, T.
    • Journal Title

      Kidney International

      Volume: 92 Issue: 3 Pages: 634-645

    • DOI

      10.1016/j.kint.2017.02.011

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Understanding the role of the gut ecosystem in Diabetes Mellitus2017

    • Author(s)
      Wanping Aw, Shinji Fukuda
    • Journal Title

      Journal of Diabetes Investigation

      Volume: 印刷中 Issue: 1 Pages: 5-12

    • DOI

      10.1111/jdi.12673

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Functional characterization of inflammatory bowel disease-associated gut dysbiosis in gnotobiotic mice.2016

    • Author(s)
      Nagao-Kitamoto, H., Shreiner, A.B., Gillilland, M.G. 3rd, Kitamoto, S., Ishii, C., Hirayama, A., Kuffa, P., El-Zaatari, M., Grasberger, H., Seekatz, A.M., Higgins, P.D., Young, V.B., Fukuda, S., Kao, J.Y., Kamada, N.
    • Journal Title

      Cell Mol. Gastroenterol. Hepatol.

      Volume: 2 Issue: 4 Pages: 468-481

    • DOI

      10.1016/j.jcmgh.2016.02.003

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] メタボロゲノミクスによる腸内細菌叢の機能理解2016

    • Author(s)
      福田真嗣
    • Journal Title

      医学のあゆみ

      Volume: 259 Pages: 1152-1160

    • Related Report
      2016 Annual Research Report
  • [Presentation] 腸内細菌叢がもたらす生体恒常性と疾患2018

    • Author(s)
      福田真嗣
    • Organizer
      第72回日本口腔科学会学術集会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] The importance of gut luminal metabolism in health and disease2018

    • Author(s)
      Shinji Fukuda
    • Organizer
      FALK symposium 212 IBD and Liver: East meets West
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 腸内環境に基づく個別化ヘルスケアの必要性2018

    • Author(s)
      福田真嗣
    • Organizer
      第39回日本食品微生物学会学術総会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] A metabologenmic approach reveals the function of gut microbiota in health and disease2018

    • Author(s)
      Shinji Fukuda
    • Organizer
      Asia-Pacific Nutrigenomics and Nutrigenetics Organization (APNNO) 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 健康長寿社会の実現に向けた腸内微生物生態系の制御2017

    • Author(s)
      福田真嗣
    • Organizer
      第64回日本生態学会
    • Place of Presentation
      早稲田大学早稲田キャンパス(東京)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 加齢がもたらす腸内環境変動は肥満型ディスバイオーシスを誘導する2017

    • Author(s)
      福田真嗣
    • Organizer
      第95回日本生理学会大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] もう一つの臓器、腸内細菌叢の機能に迫る2017

    • Author(s)
      福田真嗣
    • Organizer
      第20回生命化学研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 腸内細菌叢由来代謝物質がもたらす宿主恒常性2017

    • Author(s)
      福田真嗣
    • Organizer
      2017年度生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 腸内環境を標的とした新たな疾患予防・治療基盤技術の創出2017

    • Author(s)
      福田真嗣
    • Organizer
      第69回日本生物工学会大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] メタボロゲノミクスがもたらす腸内微生物生態系の機能理解2017

    • Author(s)
      福田真嗣
    • Organizer
      第2回環境微生物系学会合同大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 腸内細菌叢由来代謝物質がもたらす宿主恒常性2017

    • Author(s)
      福田真嗣
    • Organizer
      第21回腸内細菌学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] メタボロゲノミクスが解き明かす腸内細菌叢機能2017

    • Author(s)
      福田真嗣
    • Organizer
      第5回NGS現場の会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 腸内環境制御が切り拓く疾患予防・治療の新地平2016

    • Author(s)
      福田真嗣
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 茶色い宝石から紐解く腸内微生物生態系の真実2016

    • Author(s)
      福田真嗣
    • Organizer
      日本微生物生態学会第31回大会
    • Place of Presentation
      横須賀市文化会館(神奈川)
    • Year and Date
      2016-10-22
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 腸内環境の制御による新たな疾患予防・治療基盤技術の創出2016

    • Author(s)
      福田真嗣
    • Organizer
      第89回日本生化学会
    • Place of Presentation
      仙台国際センター(宮城)
    • Year and Date
      2016-09-25
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 腸内細菌叢由来代謝物質がもたらす生体恒常性維持機構2016

    • Author(s)
      福田真嗣
    • Organizer
      第27回日本生体防御学会学術総会
    • Place of Presentation
      九州大学 病院キャンパス(福岡)
    • Year and Date
      2016-07-07
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] メタボロゲノミクスによる腸内細菌叢の機能理解とその制御2016

    • Author(s)
      福田真嗣
    • Organizer
      第43回BMSコンファレンス
    • Place of Presentation
      ホテルニューアカオ(静岡)
    • Year and Date
      2016-07-04
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 腸内環境を標的とした新たな疾患予防・治療戦略2016

    • Author(s)
      福田真嗣
    • Organizer
      第68回日本ビタミン学会
    • Place of Presentation
      富山国際会議場(富山)
    • Year and Date
      2016-06-17
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Gut micrbiota-derived metaboiltes shape host physiological homeostasis.2016

    • Author(s)
      Shinji Fukuda
    • Organizer
      International Conference on Beneficial Microbes 2
    • Place of Presentation
      Duangchanok Conference Hall (Phuket, Thailand)
    • Year and Date
      2016-05-31
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Patent(Industrial Property Rights)] D-プシコース応答性増殖能を有する腸内細菌2018

    • Inventor(s)
      福田真嗣、竹内奈穂
    • Industrial Property Rights Holder
      福田真嗣、竹内奈穂
    • Industrial Property Rights Type
      特許
    • Filing Date
      2018
    • Related Report
      2018 Annual Research Report
  • [Patent(Industrial Property Rights)] 体力向上作用及び抗疲労作用のうちの一以上の作用を有する組成物2017

    • Inventor(s)
      福田真嗣、狩野智恵、森田寛人
    • Industrial Property Rights Holder
      福田真嗣、狩野智恵、森田寛人
    • Industrial Property Rights Type
      特許
    • Filing Date
      2017
    • Related Report
      2017 Annual Research Report

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Published: 2016-04-21   Modified: 2022-05-20  

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