Elucidation for genetic basis and molecular pathology of infantile epileptic encephalopathy
Project/Area Number |
16H05160
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Research Category |
Grant-in-Aid for Scientific Research (B)
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Allocation Type | Single-year Grants |
Section | 一般 |
Research Field |
Human genetics
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Research Institution | Hamamatsu University School of Medicine |
Principal Investigator |
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Research Collaborator |
SHIBASAKI kaori
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Project Period (FY) |
2016-04-01 – 2019-03-31
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Project Status |
Completed (Fiscal Year 2018)
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Budget Amount *help |
¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Fiscal Year 2018: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2017: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2016: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
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Keywords | てんかん性脳症 / 新規責任遺伝子 / エクソーム解析 / マウスモデル / 全エクソーム解析 / ゲノム / 遺伝子解析 / てんかん / 変異ノックインマウス / 遺伝子変異 / 乳児てんかん / 細胞モデル |
Outline of Final Research Achievements |
We identified genetic abnormalities in more than 50% of cases of infantile epileptic encephalopathies by comprehensive gene mutation analysis and copy number variation detection system using whole exome sequencing data. In addition, PPP2R1A, CACNA1G, CSNK2A1, and GABRB2 are identified as novel candidate genes through combining gene mutation data in other large-scale cohorts of brain and nervous diseases and in our study. Furthermore, we identified SLC12A5, CNPY3, CYFIP2 and RHOBTB2 as novel causative genes and reported them together with functional findings in their cell or mouse models. These studies advanced the elucidation of molecular basis of infantile epileptic encephalopathy.
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Academic Significance and Societal Importance of the Research Achievements |
新規原因遺伝子とその機能変化について知見をえることにより、乳児期発症てんかん性脳症の分子病態の理解が進んだ。原因遺伝子変異が多く同定されることは、遺伝子診断できる症例が増えることを意味しており、現時点で約5割の症例で遺伝子診断が可能である。また、2遺伝子に関しては、遺伝子変異をノックインすることによるマウスモデルの確立に成功しており、更なる病態解明と治療薬の開発に繋がる研究成果である。
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Report
(4 results)
Research Products
(62 results)
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[Journal Article] PLPBP mutations cause variable phenotypes of developmental and epileptic encephalopathy.2018
Author(s)
Shiraku H#, Nakashima M#, Takeshita S# (# denotes equal contribution), Khoo CS, Haniffa M, Ch'ng GS, Takada K, Nakajima K, Ohta M, Okanishi T, Kanai S, Fujimoto A, Saitsu H, Matsumoto N*, Kato M* (*: co-correspondence).
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Journal Title
Epilepsia Open.
Volume: 3(4)
Issue: 4
Pages: 495-502
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] GRIN2D variants in three cases of developmental and epileptic encephalopathy2018
Author(s)
Tsuchida Naomi、Hamada Keisuke、Shiina Masaaki、Kato Mitsuhiro、Kobayashi Yu、Tohyama Jun、Kimura Kazue、Hoshino Kyoko、Ganesan Vigneswari、Teik Keng W.、Nakashima Mitsuko、Mitsuhashi Satomi、Mizuguchi Takeshi、Takata Atsushi、Miyake Noriko、Saitsu Hirotomo、Ogata Kazuhiro、Miyatake Satoko、Matsumoto Naomichi
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Journal Title
Clinical Genetics
Volume: 94
Issue: 6
Pages: 538-547
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] wo Japanese cases of epileptic encephalopathy associated with an FGF12 mutation.2018
Author(s)
Takeguchi R#, Haginoya K# (# denotes equal contribution), Uchiyama Y, Fujita A, Nagura M, Takeshita E*, Inui T, Okubo Y, Sato R, Miyabayashi T, Togashi N, Saito T, Nakagawa E, Sugai K, Nakashima M, Saitsu H, Matsumoto N, Sasaki M.
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Journal Title
Brain Dev.
Volume: 40(8)
Issue: 8
Pages: 728-732
DOI
Related Report
Peer Reviewed
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[Journal Article] A case of new PCDH12 gene variants presented as dyskinetic cerebral palsy with epilepsy.2018
Author(s)
Suzuki-Muromoto S# (#: correspondence), Wakusawa K, Miyabayashi T, Sato R, Okubo Y, Endo W, Inui T, Togashi N, Kato A, Oba H, Nakashima M, Saitsu H, Matsumoto N, Haginoya K.
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Journal Title
J Hum Genet.
Volume: 63(6)
Issue: 6
Pages: 749-753
DOI
Related Report
Peer Reviewed
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[Journal Article] De novo hotspot variants in CYFIP2 cause early-onset epileptic encephalopathy2018
Author(s)
Nakashima Mitsuko、Kato Mitsuhiro、Aoto Kazushi、Shiina Masaaki、Belal Hazrat、Mukaida Souichi、Kumada Satoko、Sato Atsushi、Zerem Ayelet、Lerman-Sagie Tally、Lev Dorit、Leong Huey Yin、Tsurusaki Yoshinori、Mizuguchi Takeshi、Miyatake Satoko、Miyake Noriko、Ogata Kazuhiro、Saitsu Hirotomo、Matsumoto Naomichi
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Journal Title
Annals of Neurology
Volume: 83
Issue: 4
Pages: 794-806
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] De novo variants in CAMK2A and CAMK2B cause neurodevelopmental disorders2018
Author(s)
Akita Tenpei、Aoto Kazushi、Kato Mitsuhiro、Shiina Masaaki、Mutoh Hiroki、Nakashima Mitsuko、Kuki Ichiro、Okazaki Shin、Magara Shinichi、Shiihara Takashi、Yokochi Kenji、Aiba Kaori、Tohyama Jun、Ohba Chihiro、Miyatake Satoko、Miyake Noriko、Ogata Kazuhiro、Fukuda Atsuo、Matsumoto Naomichi、Saitsu Hirotomo
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Journal Title
Annals of Clinical and Translational Neurology
Volume: 5
Issue: 3
Pages: 280-296
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Detection of copy number variations in epilepsy using exome data2018
Author(s)
Tsuchida N, Nakashima M, Kato M, Heyman E, Inui T, Haginoya K, Watanabe S, Chiyonobu T, Morimoto M, Ohta M, Kumakura A, Kubota M, Kumagai Y, Hamano SI, Mizuguchi T. et al.
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Journal Title
Clinical Genetics
Volume: 93
Issue: 3
Pages: 577-587
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] Epileptic apnea in a patient with inherited glycosylphosphatidylinositol anchor deficiency and PIGT mutations.2018
Author(s)
Kohashi K, Ishiyama A*, Yuasa S, Tanaka T, Miya K, Adachi Y, Sato N, Saitsu H, Ohba C, Matsumoto N, Murakami Y, Kinoshita T, Sugai K, Sasaki M.
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Journal Title
Brain Dev
Volume: 40(1)
Issue: 1
Pages: 53-57
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] Three cases of KCNT1 mutations: malignant migrating partial seizures in infancy with massive systemic to pulmonary collateral arteries.2017
Author(s)
*Kawasaki Y, Kuki I, Ehara E, Murakami Y, Okazaki S, Kawawaki H, Hara M, Watanabe Y, Kishimoto S, Suda K, Saitsu H, Matsumoto N.
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Journal Title
J Pediatr
Volume: 191
Pages: 270-274
DOI
Related Report
Peer Reviewed
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[Journal Article] Equivalent missense variant in the FOXP2 and FOXP1 transcription factors causes distinct neurodevelopmental disorders.2017
Author(s)
Sollis E, Deriziotis P, Saitsu H, Miyake N, Matsumoto N, Hoffer MJV, Ruivenkamp CAL, Alders M, Okamoto N, Bijlsma EK, Plomp AS, Fisher SE.
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Journal Title
Hum Mutat
Volume: 38(11)
Issue: 11
Pages: 1542-1554
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] Novel biallelic SZT2 mutations in 3 cases of early-onset epileptic encephalopathy2017
Author(s)
Tsuchida N, Nakashima M, Miyauchi A, Yoshitomi S, Kimizu T, Ganesan V, Teik KW, Ch'ng GS, Kato M, Mizuguchi T, Takata A, Miyatake S, Miyake N, Osaka H, Yamagata T, Nakajima H, Saitsu H, Matsumoto N
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Journal Title
Clinical Genetics
Volume: 93
Issue: 2
Pages: 266-274
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] A patient with Muenke syndrome manifesting migrating neonatal seizures.2017
Author(s)
Okubo Y*, Kitamura T, Anzai M, Endo W, Inui T, Takezawa Y, Suzuki-Muromoto S, Miyabayashi T, Togashi N, Oba H, Saitsu H, Matsumoto N, Haginoya K.
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Journal Title
Brain Dev
Volume: 39(10)
Issue: 10
Pages: 873-876
DOI
Related Report
Peer Reviewed
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[Journal Article] A novel mutation in the proteolytic domain of LONP1 causes atypical CODAS syndrome.2017
Author(s)
Inui T, Anzai M, Takezawa Y, Endo W, Kakisaka Y, Kikuchi A, Onuma A, Kure S, Nishino I, Ohba C, Saitsu H, Matsumoto N, Haginoya K.
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Journal Title
J Hum Genet.
Volume: -
Issue: 6
Pages: 653-655
DOI
NAID
Related Report
Peer Reviewed / Acknowledgement Compliant
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[Journal Article] PARS2 and NARS2 mutations in infantile-onset neurodegenerative disorder2017
Author(s)
Mizuguchi T, Nakashima M, Kato M, Yamada K, Okanishi T, Ekhilevitch N, Mandel H, Eran A, Toyono M, Sawaishi Y, Motoi H, Shiina M, Ogata K, Miyatake S, Miyake N, Saitsu H, Matsumoto N
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Journal Title
Journal of Human Genetics
Volume: 62
Issue: 5
Pages: 525-529
DOI
NAID
Related Report
Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
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[Journal Article] Identification of novel SNORD118 mutations in seven patients with leukoencephalopathy with brain calcifications and cysts.2017
Author(s)
Iwama K, Mizuguchi T, Takanashi JI, Shibayama H, Shichiji M, Ito S, Oguni H, Yamamoto T, Sekine A, Nagamine S, Ikeda Y, Nishida H, Kumada S, Yoshida T, Awaya T, Tanaka R, Chikuchi R, Niwa H, Oka YI, Miyatake S, Nakashima M, Takata A, Miyake N, Ito S, Saitsu H, Matsumoto N.
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Journal Title
Clinical Genetics
Volume: -
Issue: 2
Pages: 180-187
DOI
Related Report
Peer Reviewed / Acknowledgement Compliant
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[Journal Article] A case of early onset epileptic encephalopathy with de novo mutation in SLC35A2: Clinical features and treatment for epilepsy.2017
Author(s)
Kimizu T, Takahashi Y, Oboshi T, Horino A, Koike T, Yoshitomi S, Mori T, Yamaguchi T, Ikeda H, Okamoto N, Nakashima M, Saitsu H, Kato M, Matsumoto N, Imai K.
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Journal Title
Brain Dev.
Volume: 39
Issue: 3
Pages: 256-260
DOI
Related Report
Peer Reviewed / Acknowledgement Compliant
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[Journal Article] The first report of Japanese patients with asparagine synthetase deficiency2017
Author(s)
Yamamoto T, Endo W, Ohnishi H, Kubota K, Kawamoto N, Inui T, Imamura A, Takanashi JI, Shiina M, Saitsu H, Ogata K, Matsumoto N, Haginoya K, Fukao T
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Journal Title
Brain Development
Volume: 39
Issue: 3
Pages: 236-242
DOI
Related Report
Peer Reviewed
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[Journal Article] Biallelic TBCD mutations cause early-onset neurodegenerative encephalopathy2017
Author(s)
Miyake N, Fukai R, Ohba C, ... Shiina M, Ogata K, Okuno-Yuguchi J, Fueki N, Ogiso Y, Suzumura H, Watabe Y, Imataka G, Leong HY, Fattal-Valevski A, Kramer U, Miyatake S, Kato M, Okamoto N, Sato Y, Mitsuhashi S, Nishino I, Kaneko N, Nishiyama A, Tamura T, Mizuguchi T, Nakashima M, Tanaka F, Saitsu H, Matsumoto N
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Journal Title
American Journal of Human Genetics
Volume: 99
Issue: 4
Pages: 950-961
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
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[Journal Article] Quinidine therapy for West syndrome with KCNTI mutation2017
Author(s)
Fukuoka M, Kuki I, Kawawaki H, Okazaki S, Kim K, Hattori Y, Tsuji H, Nukui M, Inoue T, Yoshida Y, Uda T, Kimura S, Mogami Y, Suzuki Y, Okamoto N, Saitsu H, Matsumoto N.
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Journal Title
Brain Dev.
Volume: 39
Issue: 1
Pages: 80-83
DOI
Related Report
Peer Reviewed / Acknowledgement Compliant
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[Journal Article] DNM1L-related encephalopathy in infancy with Leigh syndrome-like phenotype and suppression-burst.2016
Author(s)
Zaha K, Matsumoto H, Itoh M, Saitsu H, Kato K, Kato M, Ogata S, Murayama K, Kishita Y, Mizuno Y, Kohda M, Nishino I, Ohtake A, Okazaki Y, Matsumoto N, Nonoyama S.
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Journal Title
Clinical Genetics
Volume: 90
Issue: 5
Pages: 472-474
DOI
Related Report
Peer Reviewed
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[Journal Article] Impaired neuronal KCC2 function by biallelic SLC12A5 mutations in migrating focal seizures and severe developmental delay.2016
Author(s)
Saitsu H, Watanabe M, Akita T, Ohba C, Sugai K, Ong WP, Shiraishi H, Yuasa S, Matsumoto H, Beng KT, Saitoh S, Miyatake S, Nakashima M, Miyake N, Kato M, Fukuda A. and Matsumoto N.
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Journal Title
Scientific Reports
Volume: 6
Issue: 1
Pages: 30072-30072
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Characterization of SPATA5-related encephalopathy in early childhood.2016
Author(s)
Kurata H, Terashima H, Nakashima M, Okazaki T, Matsumura W, Ohno K, Saito Y, Maegaki Y, Kubota M, Nanba E, Saitsu H, Matsumoto N, Kato M.
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Journal Title
Clinical Genetics
Volume: 90
Issue: 5
Pages: 437-444
DOI
Related Report
Peer Reviewed
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[Journal Article] Somatic mutations in GLI3 and OFD1 involved in sonic hedgehog signaling cause hypothalamic hamartoma.2016
Author(s)
Saitsu H, Sonoda M, Higashijima T, Shirozu H, Masuda H, Tohyama J, Kato M, Nakashima M, Tsurusaki Y, Mizuguchi T, Miyatake S, Miyake N, Kameyama S, Matsumoto N.
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Journal Title
Ann Clin Transl Neurol.
Volume: 24
Issue: 5
Pages: 356-65
DOI
Related Report
Peer Reviewed / Open Access / Acknowledgement Compliant
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