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Elucidation of medical-genetic and patho-physiological involvement of DNase family in myocardial infarction and cancer

Research Project

Project/Area Number 16H05272
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionUniversity of Fukui

Principal Investigator

YASUDA Toshihiro  福井大学, 学術研究院医学系部門, 教授 (80175645)

Research Collaborator IIDA Reiko  
UEKI Misuzu  
KOMINATO Yoshihiko  
TAKESHITA Haruo  
KOBAYASHI Motohiro  
KAWAI Yasuyuki  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥16,380,000 (Direct Cost: ¥12,600,000、Indirect Cost: ¥3,780,000)
Fiscal Year 2018: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2017: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2016: ¥8,840,000 (Direct Cost: ¥6,800,000、Indirect Cost: ¥2,040,000)
KeywordsDNase / 遺伝的多型 / 一塩基多型 / 心筋梗塞 / 自己免疫疾患 / 遺伝的リスクファクター / 遺伝的多様性 / DNase I / SNP / Indel / 酵素 / がん / DNase 1L2 / 非同義置換型 SNP / cell-free DNA / 診断マーカー / DNase family
Outline of Final Research Achievements

We could demonstrate that; (1) Total 42 genetic variants producing a loss-of-function could be identified in DNASE1. (2) In DNase 1-like 3 and DNase II genes, which have assumed to be involved in rheumatoid arthritis, 4 and 5 non-synonymous SNPs abolishing the activity, respectively, were found. Furthermore, the synonymous SNPs in the latter exhibited a significant association with rheumatoid arthritis in the Japanese populations. (3) DNase I-like 2 has been assumed to play a role in the etiology of parakeratosis through incomplete degradation of DNA in the epidermis. In DNASE1L2, 32 missense SNPs and 19 SNPs originating from frameshift/ nonsense variants resulted in loss of function of the enzyme. (4) Almost all the variants producing a loss-of-function exhibited extremely low genetic heterogeneity. (5) Each of the minor alleles for these genetic variants may serve as one of genetic risk factors for various diseases, even though they lack a worldwide genetic distribution.

Academic Significance and Societal Importance of the Research Achievements

自己免疫疾患や心筋梗塞などに関与するDNase I遺伝子では42個の、関節リウマチに関与するDNase 1-like 3およびDNase II遺伝子ではそれぞれ4及び5個の、尋常性乾癬における不全角化病変異に係るDNase 1-like 2遺伝子では51個の不活性な酵素を産生するgenetic variantsを同定した。これらはin vivo DNase活性を減弱させるものであり、それら疾患のリスクファクターとなる。本研究の結果はDNase familyが自己免疫疾患などの遺伝的背景の一部となることの確証をもたらすものであり、もって、オーダーメード医療の推進に寄与できる。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (44 results)

All 2019 2018 2017 2016 2015

All Journal Article (17 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 15 results,  Open Access: 5 results,  Acknowledgement Compliant: 3 results) Presentation (27 results) (of which Int'l Joint Research: 3 results,  Invited: 2 results)

  • [Journal Article] Association of SNPs in transferrin and transferrin receptor genes with blood iron levels in human2019

    • Author(s)
      Fujihara Junko、Yasuda Toshihiro、Kimura-Kataoka Kaori、Takeshita Haruo
    • Journal Title

      Legal Medicine

      Volume: 36 Pages: 17-20

    • DOI

      10.1016/j.legalmed.2018.09.022

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of copy number variation in the NEDD4L gene potentially implicated in body height in the Japanese population2019

    • Author(s)
      Ueki Misuzu、Takeshita Haruo、Fujihara Junko、Kimura-Kataoka Kaori、Iida Reiko、Yasuda Toshihiro
    • Journal Title

      Legal Medicine

      Volume: 37 Pages: 83-85

    • DOI

      10.1016/j.legalmed.2019.02.003

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Low genetic heterogeneity of copy number variations (CNVs) in the genes encoding the human deoxyribonucleases 1-like 3 and II potentially relevant to autoimmunity.2019

    • Author(s)
      M. Ueki, H. Takeshita, J. Fujihara, K. Kimura, K. Yamada, Y. Takinami, R. Iida, T. Yasuda.
    • Journal Title

      PLOS ONE

      Volume: 14(4) Issue: 4 Pages: 214579-214588

    • DOI

      10.1371/journal.pone.0215479

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Association of SNPs in genes encoding zinc transporters on blood zinc levels in humans2018

    • Author(s)
      Fujihara Junko、Yasuda Toshihiro、Kimura-Kataoka Kaori、Takinami Yoshikazu、Nagao Masataka、Takeshita Haruo
    • Journal Title

      Legal Med

      Volume: 30 Pages: 28-33

    • DOI

      10.1016/j.legalmed.2017.10.009

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Knockout of Mpv17-like Protein (M-LPH) Gene in Human Hepatoma Cells Results in Impairment of mtDNA Integrity through Reduction of TFAM, OGG1 and LIG3 at the Protein Levels.2018

    • Author(s)
      R. Iida, M. Ueki, T. Yasuda.
    • Journal Title

      Oxidative Medicine and Cellular Longevity

      Volume: Article ID 6956414

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Discrimination Between Infant and Adult Bloodstains Using Micro-Raman Spectroscopy: A Preliminary Study2018

    • Author(s)
      Fujihara Junko、Nishimoto Naoki、Yasuda Toshihiro、Takeshita Haruo
    • Journal Title

      Journal of Forensic Sciences

      Volume: 1 Issue: 3 Pages: 1-4

    • DOI

      10.1111/1556-4029.13904

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of novel variants in HLA class II region related to HLA DPB1 expression and disease progression in patients with chronic hepatitis C.2017

    • Author(s)
      Hiramatsu K, Matsuda H, Nemoto T, Nosaka T, Saito Y, Naito T, Takahashi K,Ofuji K, Ohtani M, Suto H, Yasuda T, Hida Y, Kimura H, Soya Y, Nakamoto Y.
    • Journal Title

      J Med Virol.

      Volume: in press Issue: 9 Pages: 1574-1583

    • DOI

      10.1002/jmv.24814

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Survey of single-nucleotide polymorphisms in the gene encoding human deoxyribonuclease I-like 2 producing loss of function potentially implicated in the pathogenesis of parakeratosis2017

    • Author(s)
      Ueki Misuzu、Takeshita Haruo、Utsunomiya Natsuko、Chino Takanao、Oyama Noritaka、Hasegawa Minoru、Kimura-Kataoka Kaori、Fujihara Junko、Iida Reiko、Yasuda Toshihiro
    • Journal Title

      PLOS ONE

      Volume: 12 Issue: 4 Pages: e0175083-e0175083

    • DOI

      10.1371/journal.pone.0175083

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Two fatal cases of caffeine poisoning and a review of the literature2017

    • Author(s)
      J. Fujihara, T. Yasuda, K. Kimura, M. Hasegawa, S. Kurata, H. Takeshita
    • Journal Title

      Shimane J Med Sci

      Volume: 34 Pages: 55-59

    • NAID

      120006375997

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of Novel Variants in the HLA Class II Region Relate to HLA DPB1 Expression and Disease Progression in Patients with Chronic Hepatitis C2017

    • Author(s)
      K.Hiramatsu, H.Matsuda, T.Nemoto, T.Nosaka, Y.Saito, T.Naito, K.Takahashi, K.Ofuji, M.Ohtani, H.Suto, T.Yasuda, Y.Hida, H.Kimura, Y.Soya, Y.Nakamoto
    • Journal Title

      Journal of Medical Virology

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Functional single nucleotide polymorphisms (SNPs) in the genes encoding the human deoxyribonuclease (DNase) family potentially relevant to autoimmunity2016

    • Author(s)
      M. Ueki, J. Fujihara, K. Kimura, R. Iida, H. Takeshita, T. Yasuda
    • Journal Title

      Immunological Investigation

      Volume: 45 Pages: 406-419

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Association of a single nucleotide polymorphism (rs6180) in GHR gene with plural tissue weight2016

    • Author(s)
      J.Fujihara, K. Kimura-Kataoka, T. Yasuda, R. Sano, Y. Kominato, H. Takeshita
    • Journal Title

      Journal of Genetics

      Volume: 95 Issue: 1 Pages: 189-192

    • DOI

      10.1007/s12041-016-0615-4

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An autopsy case of spontaneous esophageal perforation (Boerhaave syndrome)2016

    • Author(s)
      K.Kimura, J.Fujihara, S.Kurata, Y.Takinami, K.Inoue, T.Yasuda, H.Takeshita
    • Journal Title

      Legal Medicine

      Volume: 23 Pages: 5-9

    • DOI

      10.1016/j.legalmed.2016.08.009

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Blood identification and discrimination of human and nonhuman using portable Raman spectroscopy2016

    • Author(s)
      Junko Fujihara, Yasuhisa Fujita, Tatsuyuki Yamamoto, Naoki Nishimoto, Kaori Kimura-Kataoka, Satsuki Kurata, Yoshikazu Takinami, Toshihiro Yasuda, Haruo Takeshita
    • Journal Title

      International Journal of Legal Medicine

      Volume: - Issue: 2 Pages: 319-322

    • DOI

      10.1007/s00414-016-1396-2

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] 尋常性乾癬など不全角化病変のリスクファクターとなるDNase I-like 2遺伝子におけるfunctional SNPsの同定2016

    • Author(s)
      藤原純子、木村かおり、竹下治男、飯田礼子、尾山徳孝、知野剛直、長谷川稔、植木美鈴、安田年博
    • Journal Title

      DNA多型

      Volume: 24 Pages: 208-213

    • Related Report
      2016 Annual Research Report
    • Acknowledgement Compliant
  • [Journal Article] ABO式血液型遺伝子エンハンサーハプロタイプの型特異性2016

    • Author(s)
      中島たみ子、佐野理恵、高橋遙一郎、小湊慶彦、竹下治男、安田年博
    • Journal Title

      DNA多型

      Volume: 24 Pages: 214-217

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Association of XRCC1 polymorphisms with arsenic methylation.2015

    • Author(s)
      Fujiwara, J., Yasuda, T., Iwata, H., Tanabe, S., Takeshita, H.
    • Journal Title

      Archives of Toxicology

      Volume: 1 Issue: 4 Pages: 1-4

    • DOI

      10.1007/s00204-015-1490-0

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Presentation] Interleukin8-251A>T polymorphism (rs4073) in Japanese populations and its correlation with smoking rates.2018

    • Author(s)
      K. Kimura, M. Ueki, T. Yasuda, R. Iida, J. Fujihara, K. Yamada, R. Sano, Y. Kominato, H. Takeshita.
    • Organizer
      24th Congress of the International Academy of Legal Medicine .
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Discrimination between adults and infant bloodstains using Raman spectropscopy.2018

    • Author(s)
      J. Fujihara, N. Nishimoto, Y. Fujita, T. Yamamoto, K. Kimura, T. Yasuda, H. Takeshita.
    • Organizer
      24th Congress of the International Academy of Legal Medicine .
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Survey of cipy number variations (CNVs) associated with body height2018

    • Author(s)
      T. Yasuda, R. Iida, M. Ueki, J. Fujihara, K. Kimura, K. Yamada, H. Takeshita
    • Organizer
      24th Congress of the International Academy of Legal Medicine .
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ミトコンドリアDNA維持におけるMpv17-like proteinの役割.2018

    • Author(s)
      飯田 礼子、安田 年博、植木 美鈴、竹下 治男.
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] DNA多型からタンパク多型へ―DNase遺伝子を中心に2018

    • Author(s)
      安田年博.
    • Organizer
      第27回日本DNA多型学会学術集会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 定量的real-time PCRを用いた簡便なCNV解析法の応用―NEDD4L遺伝子.2018

    • Author(s)
      飯田 礼子、植木 美鈴、竹下 治男、藤原 純子、木村 かおり、安田 年博.
    • Organizer
      第27回日本DNA多型学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] DNase familyの遺伝的多型および酵素活性解析.2018

    • Author(s)
      木村かおり、藤原 純子、山田 和夫、飯田 礼子、植木 美鈴、安田 年博、竹下 治男.
    • Organizer
      第27回日本DNA多型学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 死後血中cell-free DNAに関する予備的検討.2018

    • Author(s)
      藤原 純子、竹下 治男、木村 かおり、飯田 礼子、安田 年博.
    • Organizer
      第27回日本DNA多型学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 心疾患患者の血清中cell-free DNA濃度とDNase I活性の関連.2018

    • Author(s)
      藤原 純子、瀧波 慶和、竹下 治男、木村 かおり、飯田 礼子、植木 美鈴、安田 年博.
    • Organizer
      第27回日本DNA多型学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] SIDSにて死亡した第1子、Shaken Baby Syndromeであった第2子の同胞.2017

    • Author(s)
      木村 かおり、藤原 純子、山田 和夫、長谷川 有紀、倉田 さつき、安田 年博、竹下 治男
    • Organizer
      第101次日本法医学会学術全国集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 血中ZnおよびFe濃度に関与する遺伝子多型部位の予備的検索2017

    • Author(s)
      藤原 純子、木村 かおり、竹下 治男、倉田 さつき、安田 年博
    • Organizer
      第101次日本法医学会学術全国集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 自己免疫疾患に関与するヒトDNase family遺伝子のfunctional SNPs2017

    • Author(s)
      安田 年博、飯田 礼子、植木 美鈴、竹下 治男、藤原 純子、木村 かおり、山田 和夫、河合 康幸
    • Organizer
      第101次日本法医学会学術全国集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] GaSb薄膜の毒性評価2017

    • Author(s)
      藤原 純子、西本 尚巳、安田 年博、長谷川 正紀、竹下 治男
    • Organizer
      日本法中毒会第36年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 心疾患患者における血清中cell-free DNAに関する予備的検討2017

    • Author(s)
      藤原 純子、瀧波 慶和、竹下 治男、木村 かおり、安田 年博、倉田 さつき
    • Organizer
      第26回日本DNA多型学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Endoplasmic reticulum aminopeptidase 1 (ERAP1)遺伝子におけるSNP (rs27434)と臓器重量等との関連2017

    • Author(s)
      山田 和夫、藤原 純子、竹下 治男、木村 かおり、安田 年博
    • Organizer
      第26回日本DNA多型学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 塩基除去修復(BER)経路に関わるDNA polymerase beta (POLB)遺伝子多型の世界分布2017

    • Author(s)
      木村 かおり、藤原 純子、山田 和夫、安田 年博、竹下 治男
    • Organizer
      第26回日本DNA多型学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 国内外の多集団におけるInterleukin 8遺伝子 (CXCL8) 内 -251 A/T 多型解析 においてみられた地理的勾配および喫煙率との相関2017

    • Author(s)
      竹下治男、藤原純子、木村かおり、山田和夫、安田年博
    • Organizer
      日本法医学会第34回学術中・四国地方集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ポータブルラマン分光器を用いた非破壊の血痕検査法と人獣鑑別法の確立2016

    • Author(s)
      藤原純子、竹下治男、木村かおり、藤田恭久、安田年博、倉田さつき
    • Organizer
      日本DNA多型学会第25回学術集会
    • Place of Presentation
      東京大学大気海洋研究所(千葉県柏市)
    • Year and Date
      2016-12-02
    • Related Report
      2016 Annual Research Report
  • [Presentation] 法医学的個人識別に有用なCNVのスクリーニング2016

    • Author(s)
      飯田礼子、安田年博、植木美鈴、竹下治男、藤原純子、木村かおり
    • Organizer
      日本DNA多型学会第25回学術集会
    • Place of Presentation
      東京大学大気海洋研究所(千葉県柏市)
    • Year and Date
      2016-12-01
    • Related Report
      2016 Annual Research Report
  • [Presentation] 日本国内および世界人口におけるインターロイキン8内-251A/T多型解析2016

    • Author(s)
      木村かおり、藤原純子、安田年博、倉田さつき、小湊慶彦、佐野理恵、山田和夫、竹下治男
    • Organizer
      日本DNA多型学会第25回学術集会
    • Place of Presentation
      東京大学大気海洋研究所(千葉県柏市)
    • Year and Date
      2016-12-01
    • Related Report
      2016 Annual Research Report
  • [Presentation] Nano-LC/MS/MSを用いたテネイシンX欠損型エーラスダンロス症の診断法の開発2016

    • Author(s)
      山田和夫、渡辺淳、木村かおり、藤原純子、安田年博、竹下治男、松木健一
    • Organizer
      日本DNA多型学会第25回学術集会
    • Place of Presentation
      東京大学大気海洋研究所(千葉県柏市)
    • Year and Date
      2016-12-01
    • Related Report
      2016 Annual Research Report
  • [Presentation] モノグラフが書ける研究を目指してーdeoxyribonuclease Iを基軸として2016

    • Author(s)
      安田 年博
    • Organizer
      第38回日本法医学会学術中部地方集会
    • Place of Presentation
      福井大学医学部(福井県永平寺町)
    • Year and Date
      2016-10-15
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] p型およびn型半導体ZnOナノ粒子の毒性評価2016

    • Author(s)
      藤原純子、藤田恭久、安田年博、長谷川正紀、竹下治男
    • Organizer
      日本法中毒学会第35年会
    • Place of Presentation
      大阪産業創造館(大阪市)
    • Year and Date
      2016-07-02
    • Related Report
      2016 Annual Research Report
  • [Presentation] ヒト年齢依存性生体分子M-LPの機能解析2016

    • Author(s)
      安田年博、飯田礼子、植木美鈴、竹下治男、小湊義彦
    • Organizer
      第100次日本法医学会学術全国集会
    • Place of Presentation
      品川区立総合区民会館(東京都品川区)
    • Year and Date
      2016-06-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] ポータブルラマン分光器を用いた血痕の人獣鑑別法の予備的検討2016

    • Author(s)
      藤原純子、木村かおり、竹下治男、瀧波慶和、安田年博
    • Organizer
      第100次日本法医学会学術全国集会
    • Place of Presentation
      品川区立総合区民会館(東京都品川区)
    • Year and Date
      2016-06-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] ABO式血液型遺伝子エンハンサーのハプロタイプはABO遺伝子型とリンクしている2016

    • Author(s)
      中島たみ子、佐野理恵、高橋陽一郎、竹下治男、安田年博、小湊義彦
    • Organizer
      第100次日本法医学会学術全国集会
    • Place of Presentation
      品川区立総合区民会館(東京都品川区)
    • Year and Date
      2016-06-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] 特発性食道破裂(Boerhaave症候群)の一剖検例2016

    • Author(s)
      木村かおり、藤原純子、竹下治男、倉田さつき、安田年博
    • Organizer
      第100次日本法医学会学術全国集会
    • Place of Presentation
      品川区立総合区民会館(東京都品川区)
    • Year and Date
      2016-06-17
    • Related Report
      2016 Annual Research Report

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Published: 2016-04-21   Modified: 2020-03-30  

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