Molecular pathogenesis of bone marrow failure elucidated by comprehensive sequencing.
Project/Area Number |
16H05338
|
Research Category |
Grant-in-Aid for Scientific Research (B)
|
Allocation Type | Single-year Grants |
Section | 一般 |
Research Field |
Hematology
|
Research Institution | Kyoto University |
Principal Investigator |
|
Research Collaborator |
YOSHIDA Kenichi
KON Ayana
KATAOKA Keisuke
ONO Kinji
KOSEKI Haruhiko
Miyazaki Yasushi
Chiba Shigeru
Nakao Shinji
|
Project Period (FY) |
2016-04-01 – 2019-03-31
|
Project Status |
Completed (Fiscal Year 2018)
|
Budget Amount *help |
¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Fiscal Year 2018: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2016: ¥9,230,000 (Direct Cost: ¥7,100,000、Indirect Cost: ¥2,130,000)
|
Keywords | 骨髄不全症候群 / 再生不良性貧血 / 発作性夜間血色素尿症 / 骨髄異形成症候群 / 遺伝子変異 / コピー数異常 / 遺伝子発現異常 / 二次性白血病 / ゲノム異常 / 血液内科 / タイプ1変異 / タイプ2変異 / ゲノム / 内科 / 遺伝子 / 臨床 |
Outline of Final Research Achievements |
In this study, we clarified novel pathogenesis of bone marrow hypoplasia and luekemia evolustion in cases with bone marrow failure syndromes by simultaneous genome and transcriptome analysis. Genomic and RNA sequencing in the same case revealed that novel mutations, copy number alterations, and abnormal gene expression were significantly associated with pathophysiology of bone marrow failure syndromes. For example, gene expression and its associated mutations defined new classification of bone marrow failures into different groups such as stem cell and erythroid phenoytpes, which were related to clinical course of leukemia evolution. In addition, novel SAMD9/SAMD9L mutations and chromosome 7 deletions were coincidently identified in secondary myelodysplastic syndromes after congenital bone marrow failure. These findings were validated by analysis using basic animal models and clinical information on prognosis and morphological phenotype.
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Academic Significance and Societal Importance of the Research Achievements |
骨髄不全症候群は、骨髄異形成症候群、再生不良性貧血、発作性夜間血色素尿症を含む、骨髄造血機能の障害を共通の病態とする難治性疾患である。これらの疾患は、共通の遺伝子異常を呈しながらも、疾患特異的な異常をも来たすことが明らかとなっていた。これらの研究成果を踏まえ、本研究では、骨髄不全症候群おいてどのような異常がゲノム上あるいは遺伝子発現パターンに起こり、より悪性度の高い難治性の病型に変化するのか、さらに白血病への変化を引き起こすのかについて、これまでに培ったシーケンス技術と、マウスモデルを用いた機能解析によって明らかにした。
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Report
(4 results)
Research Products
(92 results)
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[Journal Article] Frequent germline mutations of HAVCR2 in sporadic subcutaneous panniculitis-like T-cell lymphoma2019
Author(s)
Polprasert C, Takeuchi Y, Kakiuchi N, Yoshida K, Assanasen T, Sitthi W, Bunworasate U, Pirunsarn A, Wudhikarn K, Lawasut P, Uaprasert N, Kongkiatkamon S, Moonla C, Sanada M, Akita N, Takeda J, Fujii Y, Suzuki H, Nannya Y, Shiraishi Y, Chiba K, Tanaka H, Miyano S, Rojnuckarin P, Ogawa S, Makishima H
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Journal Title
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Issue: 4
Pages: 588-595
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[Journal Article] Frequent structural variations involving programmed death ligands in Epstein-Barr virus-associated lymphomas2019
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Issue: 7
Pages: 1687-1699
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[Journal Article] Molecular pathogenesis of disease progression in MLL-rearranged AML.2018
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Journal Title
Leukemia
Volume: 33
Issue: 3
Pages: 612-624
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[Journal Article] Germline loss of function SAMD9 and SAMD9L alterations in adult myelodysplastic syndromes.2018
Author(s)
Nagata Y, Narumi S, Guan Y, Przychodzen BP, Hirsch CM, Makishima H, Shima H, Aly M, Pastor V, Kuzmanovic T, Radivoyevitch T, Adema V, Awada H, Yoshida K, Li S, Sole F, Hanna R, Jha BK, LaFramboise T, Ogawa S, Sekeres MA, Wlodarski MW, Cammenga J, Maciejewski JP
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Journal Title
Blood
Volume: 132
Issue: 21
Pages: 2309-2313
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[Journal Article] Aberrant splicing and defective mRNA production induced by somatic spliceosome mutations in myelodysplasia.2018
Author(s)
Shiozawa Y, Malcovati L, Gall A, Sato-Otsubo A, Kataoka K, Sato Y, Watatani Y, Suzuki H, Yoshizato T, Yoshida K, Sanada M, Makishima H, Shiraishi Y, Chiba K, Hellstrom-Lindberg E, Miyano S, Ogawa S, Cazzola M
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Nat. Commun.
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Issue: 1
Pages: 3649-3649
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[Journal Article] IDH1/2 Mutations Sensitize Acute Myeloid Leukemia to PARP Inhibition and This Is Reversed by IDH1/2-Mutant Inhibitors.2018
Author(s)
Molenaar RJ, Radivoyevitch T, Nagata Y, Khurshed M, Przychodzen B, Makishima H, Xu M, Bleeker FE, Wilmink JW, Carraway HE, Mukherjee S, Sekeres MA, van Noorden CJF, Maciejewski JP
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Journal Title
Clin Cancer Res
Volume: 24
Issue: 7
Pages: 1705-1715
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[Journal Article] A novel genetic and morphologic phenotype of ARID2-mediated myelodysplasia2018
Author(s)
Sakai H, Hosono N, Nakazawa H, Przychodzen B, Polprasert C, Carraway HE, Sekeres MA, Radivoyevitch T, Yoshida K, Sanada M, Yoshizato T, Kataoka K, Nakagawa MM, Ueno H, Nannya Y, Kon A, Shiozawa Y, Takeda J, Shiraishi Y, Chiba K, Miyano S, Singh J, Padgett RA, Ogawa S, Maciejewski JP, Makishima H
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Journal Title
Leukemia
Volume: 32(3)
Issue: 3
Pages: 839-843
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[Journal Article] Gene expression and risk of leukemic transformation in myelodysplasia2017
Author(s)
Shiozawa Y, Malcovati L, Galli A, Pellagatti A, Karimi M, Sato-Otsubo A, Sato Y, Suzuki H, Yoshizato T, Yoshida K, Shiraishi Y, Chiba K, Makishima H, Boultwood J, Hellstroem-Lindberg E, Miyano S, Cazzola M, Ogawa S
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Volume: 130(24)
Issue: 24
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[Journal Article] Hidden FLT3-D835Y clone in FLT3-ITD-positive acute myeloid leukemia that evolved into very late relapse with T-lymphoblastic leukemia2017
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Katagiri S, Umezu T, Asano M, Akahane D, Azuma K, Makishima H, Yoshida K, Watatani Y, Chiba K, Miyano S, Ogawa S, Ohyashiki JH, Ohyashiki K
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Leukemia and Lymphoma
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Issue: 6
Pages: 1-4
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[Journal Article] Origins of myelodysplastic syndromes after aplastic anemia.2017
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Negoro E., Nagata Y., Clemente MJ., Hosono N., Shen W., Nazha A., Yoshizato T., Hirsch C., Przychodzen B., Mahfouz RZ., Kuzmanovic T., Sekeres MA., Makishima H., Ogawa S., Maciejewski JP.
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Blood
Volume: 130
Issue: 17
Pages: 1953-1957
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[Journal Article] GATA4 loss of function in liver cancer impedes precursor to hepatocyte transition2017
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Enane Francis O.、Shuen Wai Ho、Gu Xiaorong、Quteba Ebrahem、Przychodzen Bartlomiej、Makishima Hideki、Bodo Juraj、Ng Joanna、Chee Chit Lai、Ba Rebecca、Seng Koh Lip、Lim Janice、Cheong Rachael、Teo Marissa、Hu Zhenbo、Ng Kwok Peng、Maciejewski Jaroslaw、Radivoyevitch Tomas、Chung Alexander、et al.
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Journal of Clinical Investigation
Volume: 127
Issue: 9
Pages: 3527-3542
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[Journal Article] Genomic determinants of chronic myelomonocytic leukemia2017
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Patel B. J., Przychodzen B., Thota S., Radivoyevitch T., Visconte V., Kuzmanovic T., Clemente M., Hirsch C., Morawski A., Souaid R., Saygin C., Nazha A., Demarest B., LaFramboise T., Sakaguchi H., Kojima S., Carraway H. E., Ogawa S., Makishima H., Sekeres M. A., Maciejewski J. P.
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Journal Title
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Volume: 31
Issue: 12
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[Journal Article] Tet2 loss leads to hypermutagenicity in haematopoietic stem/progenitor cells.2017
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Pan F, Wingo TS, Zhao Z, Gao R, Makishima H, Qu G, Lin L, Yu M, Ortega JR, Wang J, Nazha A, Chen L, Yao B, Liu C, Chen S, Weeks O, Ni H, Phillips BL, Huang S, Wang J, He C, Li GM, Radivoyevitch T, Aifantis I, Maciejewski JP, Yang FC, Jin P, Xu M.
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Nat Commun.
Volume: 8
Issue: 1
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[Journal Article] Molecular features of early onset adult myelodysplastic syndrome.2017
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Haematologica.
Volume: 印刷中
Issue: 6
Pages: 1028-1034
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[Journal Article] A myeloid tumor suppressor role for NOL3.2017
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Journal Title
J Exp Med.
Volume: 214
Issue: 3
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[Journal Article] Recurrent genetic defects on chromosome 5q in myeloid neoplasms.2017
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[Journal Article] Somatic PHF6 mutations in 1760 cases with various myeloid neoplasms.2016
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Issue: 11
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[Journal Article] Molecular predictors of response in patients with myeloid neoplasms treated with lenalidomide.2016
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Exp Hematol.
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[Journal Article] Impact of allogeneic hematopoietic cell transplant in patients with myeloid neoplasms carrying spliceosomal mutations.2016
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Am J Hematol.
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[Presentation] Modulation of TET2 Activity By Ascorbic Acid and Factors Affecting Lysine Acetylation.2018
Author(s)
Yihong Guan et al., Hideki Makishima, Aziz Nazha, Daniel Gackowski, Ewelina Zarakowska, Mridul Mukherji, Mikkael Sekeres, Mingjiang Xu, Ryszard linski, Jaroslaw Maciejewsk, Babal Jha.
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60th American Society of Hematology Annual Meeting
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[Presentation] A novel genetic and morphologic phenotype of ARID2-mediated myelodysplastic syndromes.2017
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Hitoshi Sakai , Naoko Hosono , Hideyuki Nakazawa , Bartlomiej Przychodzen , Chantana Polprasert , Hetty Carraway , Mikkael Sekeres , Tomas Radivoyevitch , et al., Seishi Ogawa , Jaroslaw Maciejewski , Hideki Makishima
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22nd Congress of European Hematology Association
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[Presentation] Transcriptome Sequencing Reveals Distinct Subtypes of Myelodysplasia with Prognostic Significance.2017
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Yusuke Shiozawa, Luca Malcovati, Anna Galli, Andrea Pellagatti, Mohsen Karimi, Aiko Sato-Otsubo, Yusuke Sato, Hiromichi Suzuki, Tetsuichi Yoshizato, Kenichi Yoshida, Yuichi Shiraishi, Kenichi Chiba, Hideki Makishima, Jacqueline Boultwood, Eva Hellstrom Lindberg, Satoru Miyano, Mario Cazzola, Seishi Ogawa
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22nd Congress of European Hematology Association
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[Presentation] Functional and Biological Implications of CUX1 Mutations and Deletions in Myeloid Neoplasms2017
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Mai Aly, Zubaidah M Ramdzan, Yasunobu Nagata, Suresh K. Balasubramanian, Naoko Hosono, Hideki Makishima, Valeria Visconte, Bartlomiej P. Przychodzen, Cassandra M. Hirsch, Mikkael A. Sekeres, Alain Nepveu, and Jaroslaw Maciejewski
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The 59th American Society of Hematology Annual Meeting
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[Presentation] Molecular Pathogenesis of Progressive Refractoriness in MLL -Rearranged AML.2017
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The 59th American Society of Hematology Annual Meeting
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[Presentation] Non-Random Interactions between Founder and Subclonal Mutations Shape the Clinical and Morphological Features of MDS2017
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Yasunobu Nagata, Hideki Makishima, Cassandra M. Hirsch, Mai Aly, Abhinav Goyal, Hassan Awada, Mohammad Fahad B Asad, Teodora Kuzmanovic, Bartlomiej P. Przychodzen et al., Mikkael A. Sekeres, Torsten Haferlach, Seishi Ogawa, and Jaroslaw P. Maciejewski
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[Presentation] Precision medicine for early detection of clonal evolution in myelodysplastic syndromes2017
Author(s)
Hideki Makishima, Tetsuichi Yoshizato, Kenichi Yoshida, Yasuhito Nannya, Yasunobu Nagata, Yusuke Okuno, Yuichi Shiraishi, Shigeru Chiba, Satoru Miyano, Lee-Yung Shih, Torsten Haferlach, Jaroslaw P. Maciejewski, Seishi Ogawa
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第76回 日本癌学会学術総会
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