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ATP turnover proteomics for cancer drug target discovery

Research Project

Project/Area Number 16H06150
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Tumor therapeutics
Research InstitutionNational Institutes of Biomedical Innovation, Health and Nutrition

Principal Investigator

ADACHI JUN  国立研究開発法人医薬基盤・健康・栄養研究所, 医薬基盤研究所 創薬デザイン研究センター, プロジェクトリーダー (20437255)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥27,170,000 (Direct Cost: ¥20,900,000、Indirect Cost: ¥6,270,000)
Fiscal Year 2018: ¥10,400,000 (Direct Cost: ¥8,000,000、Indirect Cost: ¥2,400,000)
Fiscal Year 2017: ¥10,400,000 (Direct Cost: ¥8,000,000、Indirect Cost: ¥2,400,000)
Fiscal Year 2016: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Keywordsリン酸化 / キナーゼ / 食道がん / 分子標的 / プロテオミクス / リン酸化プロテオミクス / キナーゼ阻害剤 / プロテオーム / 酵素活性 / 酵素反応 / 薬剤反応性 / シグナル伝達
Outline of Final Research Achievements

Quantitative data of 4846 proteins and 16267 phosphorylation sites were obtained from 35 esophageal squamous cell carcinoma cell lines. Phosphoproteome had high specificity among cells, and even in part of cells in which EGFR and ERBB2 gene amplification were not observed, kinase activation was observed. Pharmacoproteomics data integrating kinase activity of individual cells and sensitivity information of 439 inhibitors were prepared, and optimal combination information of molecular target candidates and drugs was obtained. It is suggested that stratification of patients is important for development of new treatment methods, and it is expected that our data will serve as basic data for drug candidate selection from clinical specimen data in the future.

Academic Significance and Societal Importance of the Research Achievements

日本でもがんゲノム医療が本格的に始まり、患者個別化による精密医療の時代が始まった。しかし、治療に結びつく患者の割合が限定されることが課題である。食道扁平上皮癌は未だに分子標的薬が実用化されていないが、本研究により、細胞毎にキナーゼ活性化プロファイルが極めて特異的であることが示唆された。今後、新既治療法開発を進める際に、薬剤に適した患者を層別化することが重要であると考えられ、本研究で得られた、個々の細胞のキナーゼ活性と439阻害剤の感受性情報を統合したPharmacoproteomicsデータは、臨床検体データから薬剤候補選択を行うための基礎データとして役立つことが期待される。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (8 results)

All 2019 2018 2017 2016

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (7 results) (of which Int'l Joint Research: 3 results,  Invited: 1 results)

  • [Journal Article] Improved phosphoproteomic analysis for phosphosignaling and active-kinome profiling in Matrigel-embedded spheroids and patient-derived organoids2018

    • Author(s)
      Abe Yuichi、Tada Asa、Isoyama Junko、Nagayama Satoshi、Yao Ryoji、Adachi Jun、Tomonaga Takeshi
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 11401-11401

    • DOI

      10.1038/s41598-018-29837-1

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] プロテオミクスを駆使したがん最適医療への挑戦2019

    • Author(s)
      足立淳
    • Organizer
      第25回日本質量分析学会北海道談話会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Phosphoproteomics of non-small-cell lung cancer cells treated with erlotinib reveals drug-resistant signatures and potential targets.2018

    • Author(s)
      J. Adachi, Y. Abe, M. Nagano, J. Isoyama, M. Kishida, T. Tomonaga
    • Organizer
      THE 22nd INTERNATIONAL MASS SPECTROMETRY CONFERENCE (IMSC) 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] リン酸化プロテオーム解析を用いた肺がん細胞株の薬剤応答解析2017

    • Author(s)
      足立 淳
    • Organizer
      第65回質量分析総合討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Phosphoproteomics of non-small-cell lung cancer cells reveals drug-resistant signatures and potential targets.2017

    • Author(s)
      足立 淳、朝長 毅
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] エルロチニブ処理時の非小細胞肺癌培養細胞株におけるリン酸化経時変化大規模情報の取得と活用2016

    • Author(s)
      足立 淳、阿部雄一、朝長 毅
    • Organizer
      第75回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Year and Date
      2016-10-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] Acid-based SCX fractionation for in-depth proteome and phosphoproteome analysis2016

    • Author(s)
      Jun Adachi, Kazunari Hashiguchi, Misako Sato, Kazuna Fukamizu, Yasushi Ishihama, Takeshi Tomonaga
    • Organizer
      HUPO 15th Annual World Congress
    • Place of Presentation
      台北、台湾
    • Year and Date
      2016-09-18
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Acid-based SCX fractionation for in-depth proteome and phosphoproteome analysis2016

    • Author(s)
      Jun Adachi, Kazunari Hashiguchi, Misako Sato, Kazuna Fukamizu, Yasushi Ishihama, Takeshi Tomonaga
    • Organizer
      the 64th ASMS Conference
    • Place of Presentation
      サンアントニオ、米国
    • Year and Date
      2016-06-05
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research

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Published: 2016-04-21   Modified: 2020-03-30  

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