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Investigating the resilience of Japan's cool climate forests to past and ongoing climate change

Research Project

Project/Area Number 16H06197
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Forest science
Research InstitutionForest Research and Management Organization

Principal Investigator

Worth James  国立研究開発法人森林研究・整備機構, 森林総合研究所, 主任研究員 等 (30770771)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥21,710,000 (Direct Cost: ¥16,700,000、Indirect Cost: ¥5,010,000)
Fiscal Year 2018: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Fiscal Year 2017: ¥8,840,000 (Direct Cost: ¥6,800,000、Indirect Cost: ¥2,040,000)
Fiscal Year 2016: ¥7,150,000 (Direct Cost: ¥5,500,000、Indirect Cost: ¥1,650,000)
Keywordsforest / climate change / genetic diversity / hybridisation / Tsuga diversifolia / Tsuga sieboldii / Fagus crenata / NGS / SSR markers / population genetics / Japanese Tsuga / Range-edge populations / Adaptive genes / adaptation / resilience / cool temperate forests / Climate change / Resilience / Adaptation / Cool temperate forests / Genetic diversity
Outline of Final Research Achievements

Overall the study designed the first nuclear and chloroplast genetic markers for Japanese Tsuga species, the temperate T. sieboldii and subalpine T. diversifolia. Range-wide population genetic studies of both species found significant genetic structure with the most diverged populations being the southern and northern most occurrences in both species. Genetic markers also were used to discover the southernmost population of T. diversiolia at Mt Ishizuchi, Ehime Prefecture, which consists of a mixed stand of both species. Although not identified using SSRs, RAD-seq data found evidence for low levels of past hybridisation between the two Tsuga species in southern edge populations.
For Fagus crenata, whole chloroplast genome sequencing revealed two strongly diverged clades, one in western Japan that is closest to Chinese Fagus species and the other in eastern Japan with uncertain affinity. RAD-seq data for 354 samples from four elevational clines has been obtained and analysis is ongoing.

Academic Significance and Societal Importance of the Research Achievements

Genetic isolation, hybridisation and competition with the temperate T. sieboldii threaten the long term viability of southern range-edge populations of the major Japanese subalpine tree Tsuga diversifolia.

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (7 results)

All 2018 2017

All Journal Article (3 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 3 results) Presentation (4 results) (of which Invited: 4 results)

  • [Journal Article] 四国・石鎚山系においてコメツガ南限集団を確認する2018

    • Author(s)
      James R. P. Worth(ワース ジェームズ)、TSUYAMA Ikutaro(津山幾太郎)、KIKUCHI Satoshi(菊地賢)、AIZAWA Mineaki(逢沢峰明・宇都宮大学)
    • Journal Title

      The Journal of Phytogeography and Taxonomy

      Volume: 66 Issue: 2 Pages: 185

    • DOI

      10.18942/chiribunrui.0662-14

    • NAID

      130007529141

    • ISSN
      0388-6212, 2433-0469
    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Whole chloroplast genome sequences of the Japanese hemlocks,Tsuga diversifolia and T. sieboldii,and development of chloroplast microsatellite markers applicable to East Asian Tsuga(日本のツガ、コメツガの全葉緑体ゲノムシーケンスと東アジアのツガに応用可能な葉緑体マイクロサテライトマーカーの開発)2018

    • Author(s)
      Luxian Liu(Zhejiang University)、Pan Li(Zhejiang University)、H.W Zhang(Zhejiang Qingliangfeng National Natural Reserve)、James R. P. Worth(ワース ジェームズ)
    • Journal Title

      Journal of Forest Research

      Volume: 23 Issue: 5 Pages: 318-323

    • DOI

      10.1080/13416979.2018.1512395

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Development of nuclear microsatellite markers for the Japanese conifers Tsuga diversifolia and T. sieboldii (Pinaceae)2017

    • Author(s)
      James R. P. Worth(ワース ジェームズ)、Jong-Cheol Yang(Korea National Arboretum)、KANETANI Seiichi(金谷整一)、KIKUCHI Satoshi(菊地賢)、SAKAGUCHI Shota(阪口翔太・京都大学)、IHARA-UDINO Tokuko(伊原徳子)
    • Journal Title

      Plant Species Biology

      Volume: 33 Issue: 1 Pages: 67-71

    • DOI

      10.1111/1442-1984.12182

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] When species collide: consequences of range-overlap of distantly related island endemic conifers2018

    • Author(s)
      James Worth
    • Organizer
      第129回日本森林学会大会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Speciation of Tsuga in Ulleung Island based on nuclear and chloroplast SSRs2018

    • Author(s)
      James Worth
    • Organizer
      The potential of genomics in plant systematics
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] When species collide: Consequences of range-overlap of distantly related con-generic conifers. Two case studies in separate island systems2018

    • Author(s)
      James Worth
    • Organizer
      第129回日本森林学会大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Genetic studies in Japanese Tsuga2017

    • Author(s)
      James Worth
    • Organizer
      Formation and Mechanism of Plant Diversity in East Asia
    • Related Report
      2017 Annual Research Report
    • Invited

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Published: 2016-04-21   Modified: 2020-03-30  

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