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先進ゲノム解析研究推進プラットフォーム

Research Project

Project/Area Number 16H06279
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas ― Platforms for Advanced Technologies and Research Resources

Allocation TypeSingle-year Grants
Research InstitutionNational Institute of Genetics
Principal Investigator(Support) 小原 雄治  国立遺伝学研究所, 先端ゲノミクス推進センター, 特任教授 (70135292)
Co-Investigator(Kenkyū-buntansha)(Support) 加藤 和人  大阪大学, 大学院医学系研究科, 教授 (10202011)
川嶋 実苗  国立研究開発法人科学技術振興機構, バイオサイエンスデータベースセンター, 研究員 (00396706)
豊田 敦  国立遺伝学研究所, 生命情報研究センター, 特任教授 (10267495)
鈴木 穣  東京大学, 大学院新領域創成科学研究科, 教授 (40323646)
三井 純  東京大学, 医学部附属病院, 特任准教授 (70579862)
林 哲也  九州大学, 大学院医学研究院, 教授 (10173014)
時野 隆至  札幌医科大学, 医学部, 教授 (40202197)
黒川 顕  国立遺伝学研究所, 生命情報研究センター, 教授 (20343246)
中村 保一  国立遺伝学研究所, 生命情報研究センター, 教授 (60370920)
野口 英樹  大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任教授 (50333349)
高木 利久  東京大学, 大学院理学系研究科, 教授 (30110836)
岩崎 渉  東京大学, 大学院理学系研究科, 准教授 (50545019)
森下 真一  東京大学, 大学院新領域創成科学研究科, 教授 (90292854)
浅井 潔  東京大学, 大学院新領域創成科学研究科, 教授 (30356357)
笠原 雅弘  東京大学, 大学院新領域創成科学研究科, 講師 (60376605)
伊藤 武彦  東京工業大学, 生命理工学院, 教授 (90501106)
山田 拓司  東京工業大学, 生命理工学院, 准教授 (10437262)
小椋 義俊  九州大学, 大学院医学研究院, 准教授 (40363585)
久原 哲  九州大学, 大学院農学研究院, 名誉教授 (00153320)
高橋 弘喜  千葉大学, 真菌医学研究センター, 准教授 (60548460)
瀬々 潤  国立研究開発法人産業技術総合研究所, 人工知能研究センター, 研究チーム長 (40361539)
榊原 康文  慶應義塾大学, 理工学部, 教授 (10287427)
Project Period (FY) 2016 – 2021
Project Status Granted (Fiscal Year 2018)
Budget Amount *help
¥7,698,340,000 (Direct Cost: ¥5,921,800,000、Indirect Cost: ¥1,776,540,000)
Fiscal Year 2018: ¥1,282,970,000 (Direct Cost: ¥986,900,000、Indirect Cost: ¥296,070,000)
Fiscal Year 2017: ¥1,282,970,000 (Direct Cost: ¥986,900,000、Indirect Cost: ¥296,070,000)
Fiscal Year 2016: ¥1,283,490,000 (Direct Cost: ¥987,300,000、Indirect Cost: ¥296,190,000)
Keywordsゲノムアッセンブル / ゲノム多型 / エピゲノム / メタゲノム / ゲノムアノテーション / 次世代DNAシーケンサー / 新規ゲノム配列決定 / リシーケンシング / RNA-Seq / 1細胞解析 / メタゲノム解析 / スーパーコンピューター
Outline of Annual Research Achievements

①総括支援活動では、支援課題の公募を行い、領域外有識者による審査委員会により選考し、支援を行った。経費上限設定など多くの採択ができるように努めた結果、応募188件、採択93件(採択率49.5%)となった。支援の成果として2017年度に54報の論文発表がなされた。
②大規模配列解析拠点ネットワーク支援活動においては、最先端技術を提供するためにそれらの整備や高度化を進めた。遺伝研拠点では染色体の端から端までの連続した配列完成を目指して、ロングリードシーケンサー(PacBio Sequel)、長鎖DNA試料調製技術、さらに1分子ゲノムマッピングシステム(Irysシステム)の最適化を進め、実際の試料に応用した。東大柏拠点では、1細胞解析技術を整備し支援に供するとともに、Nanopore MinIONを用いた一連の要素技術開発を進めた。九大拠点では微生物ゲノムのNGS解析最適化を進めた。札幌医大拠点ではLiquid Biopsyによる体細胞における低頻度変異検出技術開発を進めた。
③高度情報解析支援ネットワーク活動では、支援から浮かび上がった課題を解決するソフトウェアの開発を進めた。支援で特に活用されたものは、真核2倍体用denovoハプロタイプアセンブラPlatanus2(東工大)、染色体大規模構造変異高精度検出アルゴリズムCOSMOS、変異解析結果の信頼性を評価するソフトウェアEAGLE(以上、産総研)、エクソン・イントロン境界におけるスプライソソーム結合頻度の解析パイプライン(東大)、であった。また、CLIP-seqデータの解析パイプライン、高速オルソログ同定プログラムSonicParanoid、ロングリード向けアラインメントツールminialign(以上、東大)は今後の活用が予想される。
高度化等の成果として48報の論文発表がなされた。

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

・研究支援代表の下、研究支援分担者21名、連携研究支援者26名、総勢48名の班員が全国16の大学・研究機関(部局数は25)から参加して、支援及びそのための技術高度化を進めることができた。また、引き続き国立遺伝学研究所を中核機関とし、参加する班員が所属する主な機関を連携機関とする連携ネットワークを形成して、支援を進めた。
・支援課題公募については、透明性を確保するために審査委員会は領域外有識者のみとし、領域からの技術的・経費的な情報提供を参考に支援課題を決定した。支援希望内容は各課題で拡大する傾向にあるが、経費上限を設定するなどしてできるだけ多く支援するように努め、本年度は採択率を約50%に引き上げることができた。科研費全種目から課題採択できているが、同程度の評価の場合は若手・少額科研費からの課題を優先するなどの措置をとった。支援技術分類は、新規ゲノム決定 : 18件、変異解析 : 25件、修飾解析 : 21件、RNA解析 : 40件、メタゲノム解析等 : 5件、超高感度解析 : 10件、情報解析のみ : 3件、合計122(採択1件あたり複数の技術支援がある)であり、引き続き多様な技術の提供ができた。
・支援技術の高度化のための活動も大規模DNAシーケンシング支援、高度情報解析支援共に進めることができた。
・初年度開催できなかった拡大班会議を開催し、支援依頼者の若手共同研究者の旅費援助をするなどして、支援側と依頼者の交流を深めることができた。

Strategy for Future Research Activity

・最先端の技術をより多く提供するために、支援技術の高度化を進めることが重要である。ゲノム解析は技術進展のスピードが特に速く、2-3年で解析手法が様変わりするために、新たなDNAシーケンシング技術の導入・開発、目的に沿った情報解析技術の開発と整備が中心になる。
・支援課題の採択率は、現状は予算の制限から50%にとどまっており、より多い課題の支援が求められる。現状では、各支援課題の支援経費の上限を設けて、これを超す分は経費負担を求める形にすることで、ようやくこの採択率になっている。解析内容を精査する効果はあるが、一方でゲノム解析においては一定規模以上で支援しないと意味のある結果が出ないことも多く、若手をはじめ、経費面で敷居が高くなるケースもある。そのためにも技術高度化により、より効果的な解析技術の整備やコスト削減を図っていく必要がある。
・大量データ解析の支援要望はますます増加していることから、解析パイプラインの整備とともに、情報解析講習会の開催を継続拡充する必要がある。

Report

(2 results)
  • 2017 Annual Research Report
  • 2016 Annual Research Report

Research Products

(541 results)

All 2018 2017 2016 Other

All Int'l Joint Research Journal Article Presentation Book Remarks Patent(Industrial Property Rights) Funded Workshop

  • [Int'l Joint Research] コールドスプリングハーバー研究所/エネルギー省連合ゲノム研究所/ヴァンダービルト大学(アメリカ)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] マックスプランク研究所/ミュンスター大学/オスナブリュック大学(ドイツ)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ケンブリッジ大学/オックスフォード大学(英国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] モナシュ大学/メルボルン大学(オーストラリア)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] チュラーロンコーン大学/マヒドン大学(タイ)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] USDepartment of Energy Joint Genome Institute/University of California at Berkley/National Cancer Institute(USA)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] University of Calgary/University of Western Ontario(Canada)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] Sam Ratulangi University(Indonesia)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] Mahidol University(Thailand)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] Radboud University(The Netherlands)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2016 Annual Research Report
  • [Journal Article] DFAST : a flexible prokaryotic genome annotation pipeline for faster genome publication2018

    • Author(s)
      Y Tanizawa, T Fujisawa, Y Nakamura
    • Journal Title

      Bioinformatics

      Volume: 34 Issue: 6 Pages: 1037-1039

    • DOI
      10.1093/bioinformatics/btx713
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Capturing alternative secondary structures of RNA by decomposition of base-pairing probabilities2018

    • Author(s)
      Taichi Hagio, Shun Sakuraba, Junichi Iwakiri, Ryota Mori and Kiyoshi Asai
    • Journal Title

      BMC Bioinformatics

      Volume: 19 Issue: Suppl 1 Pages: 38-38

    • DOI
      10.1186/s12859-018-2018-4
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Introducing difference recurrence relations for faster semi-global alignment of long sequences2018

    • Author(s)
      Hajime Suzuki and Masahiro Kasahara.
    • Journal Title

      BMC Bioinformatics

      Volume: 19 Issue: Suppl 1 Pages: 45-45

    • DOI
      10.1186/s12859-018-2014-8
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Identifying statistically significant combinatorial markers for survival analysis.2018

    • Author(s)
      Relator R, Terada A, Sese J.
    • Journal Title

      BMC Bioinformatics

      Volume: 11 Issue: Suppl 2 Pages: 31-31

    • DOI
      10.1186/s12920-018-0346-x
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] EAGLE : Explicit Alternative Genome Likelihood Evaluator.2018

    • Author(s)
      Kuo T, Frith M C, Sese J, and Horton P.
    • Journal Title

      BMC Medical Genomics.

      Volume: 11 Issue: Suppl 2 Pages: 28-28

    • DOI
      10.1186/s12920-018-0342-1
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] VITCOMIC2 : visualization tool for the phylogenetic composition of microbial communities based on 16SrRNA gene amplicons and metagenomic shotgun sequencing2018

    • Author(s)
      Mori H, Maruyama T, Yano M, Yamada T, Kurokawa K.
    • Journal Title

      BMC Systems Biology

      Volume: 12 Pages: 30-30

    • DOI
      10.1186/s12918-018-0545-2
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Combined mutation of Apc, Kras and Tgfbr2 effectively drives metastasis of intestinal cancer.2018

    • Author(s)
      Sakai E, Nakayama M, Oshima H, Kouyama Y, Niida A, Fujii S, Ochiai A, Nakayama KI, Mimori K, Suzuki Y, Hong CP, Ock CY, Kim SJ, and Oshima M.
    • Journal Title

      Cancer Research

      Volume: 78 Pages: 1334-1346

    • DOI
      10.1158/0008-5472.can-17-3303
    • NAID
      120006452378
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Transcription factor IRF8 governs enhancer landscape dynamics in mononuclear phagocyte progenitors2018

    • Author(s)
      Kurotaki D, Nakabayashi J, Nishiyama A, Sasaki H, Kawase W, Kaneko N, Ochiai K, Igarashi K, Ozato K, Suzuki Y, Tamura T
    • Journal Title

      Cell Reports

      Volume: 22 Pages: 2628-2641

    • DOI
      10.1016/j.celrep.2018.02.048
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Anisogamy evolved with a reduced sex-determining region in volvocine green algae.2018

    • Author(s)
      Hamaji, T., Kawai-Toyooka, H., Uchimura, H., Suzuki, M., Noguchi, H., Minakuchi, Y., Toyoda, A., Fujiyama, A., Miyagishima, S., Umen, J. G. And Nozaki, H.
    • Journal Title

      Communications Biology

      Volume: 1 Pages: 17-17

    • DOI
      10.1038/s42003-018-0019-5
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Identification of DNA methylated regions by using methylated DNA immunoprecipitation sequencing in Brassica rapa2018

    • Author(s)
      Takahashi S, Fukushima N, Osabe K, Itabashi E, Shimizu M, Miyaji N, Takasaki-Yasuda T, Suzuki Y, Seki M, Fujimoto R
    • Journal Title

      Crop & Pasture Science

      Volume: 69 Pages: 107-107

    • DOI
      10.1071/cp17394
    • NAID
      120006546778
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular and Cellular Network Systems Underlying Cold Tolerance of Caenorhabditis elegans2018

    • Author(s)
      Kohei OHNISHI, Natsune TAKAGAKI, Misaki OKAHATA, Mayu FUJITA, Akane OHTA, Atsushi KUHARA
    • Journal Title

      Cryobiology and Cryotechnology

    • Description
      in press 未定
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Subtypes of the Type II Pit Pattern Reflect Distinct Molecular Subclasses in the Serrated Neoplastic Pathway.2018

    • Author(s)
      Aoki H, Yamamoto E, Yamano HO, Sugai T, Kimura T, Tanaka Y, Matsushita HO, Yoshikawa K, Takagi R, Harada E, Nakaoka M, Yoshida Y, Harada T, Sudo G, Eizuka M, Yorozu A, Kitajima H, Niinuma T, Kai M, Nojima M, Suzuki H, Nakase H.
    • Journal Title

      Dig Dis Sci.

      Volume: 印刷中

    • DOI
      10.1007/s10620-018-5016-5
    • Description
      not yet
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs2018

    • Author(s)
      Imamura K, Takaya A, Ishida Y, Fukuoka Y, Taya T, Nakaki R, Kakeda M, Imamachi N, Sato A, Yamada T, Onoguchi-Mizutani R, Akizuki G, Tanu T, Tao K, Miyao S, Suzuki Y, Nagahama M, Yamamoto T, Jensen TH, Akimitsu N.
    • Journal Title

      EMBO Journal

    • Description
      accepted
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Mice with endogenous TDP-43 mutations exhibit gain of splicing function and characteristics of amyotrophic lateral sclerosis.2018

    • Author(s)
      Fratta P, Sivakumar P, Humphrey J, Lo K, Ricketts T, Oliveira H, Brito JM, Kalmar B, Ule A, Yu Y, Gondo Y, 他18名, Buratti E, Plagnol V, Fisher EM, Acevedo A
    • Journal Title

      EMBO Journal

    • DOI
      10.15252/embj.201798684
    • Description
      in press
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Targeted sequencing reveals genetic variants associated with sensitivity of 79 human cancer xenografts to anticancer drugs.2018

    • Author(s)
      Udagawa C, Sasaki Y, Suemizu H, Ohnishi Y, Ohnishi H, Tokino T, Zembutsu H.
    • Journal Title

      Exp Ther Med

      Volume: 15 Pages: 1339-1359

    • DOI
      10.3892/etm.2017.5533
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Identification of Minimal p53 Promoter Region Regulated by MALAT1 in Human Lung Adenocarcinoma Cells.2018

    • Author(s)
      Tano K, Onoguchi-Mizutani R, Yeasmin F, Uchiumi F, Suzuki Y, Yada T, Akimitsu N.
    • Journal Title

      Front Genet.

      Volume: なし Pages: 208-208

    • DOI
      10.3389/fgene.2017.00208
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Delayed Degradation and Impaired Dondritic Delivery of Intron-Lacking EGFP-Arc/Arg3.1 mRNA in EGFP-Arc Transgenic Mice.2018

    • Author(s)
      Steward O, Matsudaira Yee K, Farris S, Pirbhoy PS, Worley P, Okamura K, Okuno H, Bito H.
    • Journal Title

      Front Mol Neurosci

      Volume: 10 Pages: 435-435

    • DOI
      10.3389/fnmol.2017.00435
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Identification of transposable elements contributing to tissue-specific expression of long non-coding RNAs2018

    • Author(s)
      Takashi Chishima, Junichi Iwakiri, Michiaki Hamada
    • Journal Title

      Genes

      Volume: 9 Issue: 1 Pages: 23-23

    • DOI
      10.3390/genes9010023
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Increasing canopy photosynthesis in rice can be achieved without a large increase in water use-a model based on free-air CO2 enrichment2018

    • Author(s)
      Ikawa, H., Chen, C.P., Sikma, M., Yoshimoto, M., Sakai, H., Tokida, T., Usui, Y., Nakamura, H., Ono, K., Maruyama, M., Watanabe, T., Kuwagata, T., and Hasegawa, T.
    • Journal Title

      Global Change Biology

      Volume: 24 Pages: 1321-1341

    • DOI
      10.1111/gcb.13981
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A Common variant of MAF/c-MAF, transcriptional factor genc in the kidney, is associated with gout susceptjbility.2018

    • Author(s)
      Toshihide Higashino, Hirotaka Matsuo, Yukinori Okada, Hiroshi Nakashima, Seiko Shimizu, Masayuki Sakiyama, Shin Tadokoro, Akiyoshi Nakayama, Makoto Kawaguchi, Mako Komatsu, Asahi Hishida, Masahiro Nakatochi, Hiroshi Ooyama, Junko Imaki, Nariyoshi Shinomiy
    • Journal Title

      Hum Cell

      Volume: 31 Pages: 10-13

    • DOI
      10.1007/s13577-017-0186-6
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Refining the clinical phenotype of Okur-Chung neurodevelopmental syndrome.2018

    • Author(s)
      Akahira-Azuma M, Tsurusaki Y, Enomoto Y, Mitsui J, Kurosawa K.
    • Journal Title

      Hum Genome Var.

      Volume: 5 Pages: 18011-18011

    • DOI
      10.1038/hgv.2018.11
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Estimating energy parameters for RNA secondary structure predictions using both experimental and computational data2018

    • Author(s)
      Shimpei Nishida, Shun Sakuraba, Kiyoshi Asai, and Michiaki Hamada
    • Journal Title

      IEEE/ACM Transactions on Computational Biology and Bioinformatics

    • DOI
      10.1109/tcbb.2018.2813388
    • Description
      in press
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High-quality overlapping paired-end reads for the detection of A-to-I editing on small RNA.2018

    • Author(s)
      Galipon J, Ishii R, Ishiguro S, Suzuki Y, Kondo S, Okada-Hatakeyama M, Tomita M, Ui-Tei K.
    • Journal Title

      Methods Mol. Biol.

    • Description
      in press 未定
    • Related Report
      2017 Annual Research Report
  • [Journal Article] Tropomyosin isoforms differentially affect muscle contractility in the head and body regions in the nematode Caenorhabditis elegans.2018

    • Author(s)
      Dawn E. Barnes, Eichi Watabe, Kanako Ono, Euiyoung Kwak, Hidehito Kuroyanagi, Shoichiro Ono
    • Journal Title

      Mol Biol Cell

      Volume: 29 Pages: 1075-1088

    • DOI
      10.1091/mbc.e17-03-0152
    • Description
      未定
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Molecular insights into the non-recombining nature of the spinach male-determining region.2018

    • Author(s)
      Kudoh T., M. Takahashi, T. Osabe, A. Toyoda, H. Hirakawa, Y. Suzuki, N. Ohmido, Y. Onodera
    • Journal Title

      Molecular Genetics and Genomics

      Volume: 293 Issue: 2 Pages: 557-568

    • DOI
      10.1007/s00438-017-1405-2
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Layer-specific morphological and molecular differences in neocortical astrocytes and their dependence on neuronal layers2018

    • Author(s)
      Darin Lanjakornsiripan, Baek-Jun Pior, Daichi Kawaguchi, Shohei Furutachi, Tomoaki Tahara, Yu Katsuyama, Yutaka Suzuki, Yugo Fukazawa & Yukiko Gotoh
    • Journal Title

      Nature Communications

      Volume: 9 Pages: 1623-1623

    • DOI
      10.1038/s41467-018-03940-3
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Expansions of intronic TTTCA and TTTTA repeats in benign adult familial myoclonic epilepsy2018

    • Author(s)
      Ishiura Hiroyuki、、、Tamaoka Akira、、、Tsuji Shoji
    • Journal Title

      Nature Genetics

      Volume: 50 Pages: 581-590

    • DOI
      10.1038/s41588-018-0067-2
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Host lignin composition affects haustorium induction in the parasitic plants Phtheirospermum japonicum and Striga hermonthica.2018

    • Author(s)
      Cui S, Wada S, Tobimatsu Y, Takeda Y, Saucet SB, Takano T, Umezawa T, Shirasu K, Yoshida S.
    • Journal Title

      New Phytol.

      Volume: 218 Pages: 710-723

    • DOI
      10.1111/nph.15033
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Dynamically and epigenetically coordinated GATA/ETS/SOX transcription factor expression is indispensable for endothelial cell differentiation.2018

    • Author(s)
      Kanki Y, Nakaki R, Shimamura T, Matsunaga T, Yamamizu K, Katayama S, Suehiro JI, Osawa T, Aburatani H, Kodama T, Wada Y, Yamashita JK, Minami T.
    • Journal Title

      Nucleic Acids Res.

      Volume: 印刷中 Pages: 4344-4358

    • DOI
      10.1093/nar/gkx159
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] DBTSS/DBKERO for integrated analysis of transcriptional regulation2018

    • Author(s)
      Suzuki A, Kawano S, Mitsuyama T, Suyama M, Kanai Y, Shirahige K, Sasaki H, Tokunaga K, Tsuchihara K, Sugano S, Nakai K, Suzuki Y.
    • Journal Title

      Nucleic Acids Research

      Volume: 46 Issue: (D1)

    • DOI
      10.1093/nar/gkx1001
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mining of the Uncharacterized Cytochrome P450 Genes Involved in Alkaloid Biosynthesis in California Poppy Using a Draft Genome Sequence.2018

    • Author(s)
      Hori K, Yamada Y, Purwanto R, Minakuchi Y, Toyoda A, Hirakawa H, Sato F.
    • Journal Title

      Plant Cell Physiol.

      Volume: 59 Issue: 2 Pages: 222-233

    • DOI
      10.1093/pcp/pcx210
    • NAID
      120006384165
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genomic landscape at a late stage of stickleback speciation : high genomic divergence interspersed by small localized regions of introgression.2018

    • Author(s)
      Ravinet, M., Yoshida, K., Shigenobu, S., Toyoda, A., Fujiyama, A., and Kitano, J.
    • Journal Title

      PLoS Genetics

      Pages: 0-0

    • Description
      in press
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Impaired diversity of the lung microbiome predicts progression of idiopathic pulmonary fibrosis.2018

    • Author(s)
      Takahashi Y, Saito A, Chiba H, Kuronuma K. Ikeda K. Kobayashi T, Ariki S, Takahashi M, Sasaki Y, Takahashi H.
    • Journal Title

      Respir Res

      Volume: 19 Pages: 34-34

    • DOI
      10.1186/s12931-018-0736-9
    • Description
      印刷中
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Base-pairing probability in the microRNA stem region affects the binding and editing specificity of human A-to-I editing enzyme ADAR1-p110 and ADAR2.2018

    • Author(s)
      Ishiguro S, Galipon J, Ishii R, Suzuki Y, Kondo S, Okada-Hatakeyama M, Tomita M, Ui-Tei K.
    • Journal Title

      RNA Biology

    • Description
      in press 未定
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The CCR4-NOT deadenylase complex controls Atg7-dependent cell death and heart function.2018

    • Author(s)
      Yamaguchi Tomokazu et al
    • Journal Title

      Science Signaling

      Volume: 11 Issue: 516 Pages: 3638-3638

    • DOI
      10.1126/scisignal.aan3638
    • NAID
      120006543246
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Identification of potential regulatory mutations using multi-omics analysis and haplotyping of lung adenocarcinoma cell lines2018

    • Author(s)
      Sarun Sereewattanawoot, Ayako Suzuki, Masahide Seki, Yoshitaka Sakamoto, Takashi Kohno, Sumio Sugano, Katsuya Tsuchihara & Yutaka Suzuki
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 4926-4926

    • DOI
      10.1038/s41598-018-23342-1
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Combinatory use of distinct single-cell RNA-seq analytical platforms reveals the heterogeneous transcriptome response.2018

    • Author(s)
      Kashima Y, Suzuki A, Liu Y, Hosokawa M, Matsunaga H, Shirai M, Arikawa K, Sugano S, Suzuki Y., et al
    • Journal Title

      Scientific Reports

      Volume: volume 8 Pages: 3482-3482

    • DOI
      10.1038/s41598-018-21161-y
    • NAID
      130007556165
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia.2018

    • Author(s)
      Kumagai Y, Yoshizawa S, Nakajima Y, Watanabe M, Fukunaga T, Ogura Y, Hayashi T, Oshima K, Hattori M, Ikeuchi M, Kogure K, DeLong EF, Iwasaki W
    • Journal Title

      The ISME Journal

      Volume: in press Pages: 1329-1343

    • DOI
      10.1038/s41396-018-0058-4
    • Description
      Early access
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Tissue network underlying cold tolerance2018

    • Author(s)
      Mayu Fujita, Kohei Ohnishi, Akane Ohta, Atsushi Kuhara
    • Journal Title

      細胞

    • Description
      in press
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ナノポアリードのアライメントツール2018

    • Author(s)
      鈴木 創, 笠原雅弘
    • Journal Title

      実験医学

      Volume: 36 Issue: 1

    • Related Report
      2017 Annual Research Report
  • [Journal Article] イチゴ新品種‘恋みのり’が有する炭疽病抵抗性-Colletotrichum gloeosporioides種複合体の菌種による差異の一例-2018

    • Author(s)
      遠藤(飛川)みのり
    • Journal Title

      植物防疫

      Volume: 72 Pages: 236-240

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Long-term expansion of alveolar stem cells derived from human iPS cells by forming organoids.2018

    • Author(s)
      Yamamoto Y, Gotoh S, Korogi Y, Seki M, Konishi S, Ikeo S, Sone N, Nagasaki T, Matsumoto H, Muro S, Hirai T, Ito I, Kohno T, Suzuki Y, Mishima M.
    • Journal Title

      Nat Methods.

      Volume: 14 Issue: 11 Pages: 1097-1106

    • DOI
      10.1038/nmeth.4448
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Epigenetic silencing of SMOCI in traditional serrated adenoma and colorectal cancer.2018

    • Author(s)
      Aoki H, Yamamoto E, Takasawa A, Niinuma T, Yamano HO, Harada T, Matsushita HO, Yoshikawa K, Takagi R, Harada E, Tanaka Y, Yoshida Y, Aoyama T, Eizuka M, Yorozu A, Kitajima H, Kai M, Sawada N, Sugai T, Nakase H, Suzuki H.
    • Journal Title

      Oncotarget

      Volume: 9 Pages: 4707-4721

    • DOI
      10.18632/oncotarget.23523
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] <b>Methods for analyzing next-generation sequencing dataVI. genome assembly </b>2017

    • Author(s)
      谷澤 靖洋、神沼 英里、中村 保一、清水 謙多郎、門田 幸二
    • Journal Title

      Japanese Journal of Lactic Acid Bacteria

      Volume: 27 Issue: 1 Pages: 41-52

    • DOI
      10.4109/jslab.27.41
    • NAID
      130005628247
    • Year and Date
      2017-04-26
    • Related Report
      2016 Annual Research Report
    • Open Access
  • [Journal Article] Significance of measurement of serum trough level and anti-drug antibody of adalimumab as personalised pharmacokinetics in patients with Crohn's disease : a subanalysis of the DIAMOND trial.2017

    • Author(s)
      Nakase H, Motoya S, Matsumoto T, Watanabe K, Hisamatsu T, Yoshimura N, Ishida T, Kato S, Nakagawa T, Esaki M, Nagahori M, Matsui T, Naito Y, Kanai T, Suzuki Y, Nojima M, Watanabe M, Hibi T; DIAMOND study group.
    • Journal Title

      Aliment Pharmacol Ther.

      Volume: 46 Pages: 873-882

    • DOI
      10.1111/apt.14318
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] GWAS of clinically defined gout and subtypes identifies multiple susceptibility loci that include urate transporter genes2017

    • Author(s)
      Nakayama A, Nakaoka H, Yamamoto K, Sakiyama M, Shaukat A, Toyoda Y, Okada Y, Kamatani Y, Nakamura T. Takada T, Inoue K, Yasujima T, Yuasa H, Shirahama Y, Wakai K. Kubo M. Matsuo H.
    • Journal Title

      Ann Rheum Dis

      Volume: 76 Pages: 869-877

    • DOI
      10.1136/annrheumdis-2016-209632
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Training alignment parameters for arbitrary sequencers with last-train,2017

    • Author(s)
      Michiaki Hamada, Yukiteru Ono, Kiyoshi Asai, Martin C, Frith
    • Journal Title

      Bioinformatics

      Volume: 33 Issue: 6 Pages: 926-928

    • DOI
      10.1093/bioinformatics/btw742
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Computational prediction of lncRNA-mRNA interactions by integrating tissue2017

    • Author(s)
      Junichi Iwakiri, Goro Terai, Michiaki Hamada
    • Journal Title

      Biology Direct

      Volume: 12 Pages: 15-15

    • DOI
      10.1186/s13062-017-0183-4
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri2017

    • Author(s)
      Yasuhiro TANIZAWA, Hisami KOBAYASHI, Eli KAMINUMA, Mitsuo SAKAMOTO, Moriya OHKUMA, Yasukazu NAKAMURA, Masanori ARITA, Masanori TOHNO
    • Journal Title

      Bioscience of Microbiota, Food and Health

      Volume: 36 Issue: 3 Pages: 129-134

    • DOI
      10.12938/bmfh.16-026
    • NAID
      130005759236
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Global gene expression reveals stress-responsive genes in Aspergillus fumigatus mycelia.2017

    • Author(s)
      Takahashi H, Kusuya Y, Hagiwara D, Takahashi-Nakaguchi A, Sakai K, Gonoi T.
    • Journal Title

      BMC Genomics

      Volume: 18 Issue: 1 Pages: 942-942

    • DOI
      10.1186/s12864-017-4316-z
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals.2017

    • Author(s)
      Masahiro Uesaka, Kiyokazu Agata, Takao Oishi, Kinichi Nakashima, Takuya Imamura
    • Journal Title

      BMC Genomics

      Volume: 18 Pages: 285-285

    • DOI
      10.1186/s12864-017-3662-1
    • NAID
      120006305760
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Comprehensive evaluation of non-hybrid genome assembly tools for third-generation PacBio long-read sequence data2017

    • Author(s)
      Vasanthan Jayakumar and Yasubumi Sakakibara
    • Journal Title

      Briefings in Bioinformatics

    • DOI
      10.1093/bib/bbx147
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Identification and characterization of a metastatic suppressor BRMSIL as target gene of p53.2017

    • Author(s)
      Koyama R, Tamura M, Nakagaki T, Ohashi T, Idogawa M, Suzuki H, Tokino T, Sasaki Y.
    • Journal Title

      Cancer Science

      Volume: 108 Pages: 2413-2421

    • DOI
      10.1111/cas.13420
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Insights into land plant evolution garnered from the Marchantia polymorpha genome2017

    • Author(s)
      Bowman J, Kouchi T,..(106名)..Yokoyama R, ..(4名)
    • Journal Title

      Cell

      Volume: 171 Pages: 287-304

    • DOI
      10.1016/j.cell.2017.09.030
    • NAID
      120006353839
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Light controls protein localization through phytochrome-mediated alternative promoter selection.2017

    • Author(s)
      Ushijima T, Hanada K, Gotoh E, Yamori W, Kodama Y, Tanaka H, Kusano M, Fukushima A, Tokizawa M, Yamamoto YY, Tada Y, Suzuki Y, and Matsushita T
    • Journal Title

      Cell

      Volume: 171 Pages: 1316-1325

    • DOI
      10.1016/j.cell.2017.10.018
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Regnase-1 Maintains Iron Homeostasis via the Degradation of Transferrin Receptor 1 and Prolyl-Hydroxylase-Domain-Containing Protein 3 mRNAs.2017

    • Author(s)
      Yoshinaga, M., Nakatsuka, Y., Vandenbon, A., Ori, D., Uehata, T., Tsujimura, T., Suzuki, Y., Mino, T., Takeuchi, O.
    • Journal Title

      Cell Reports

      Volume: 19 Issue: 8 Pages: 1614-1630

    • DOI
      10.1016/j.celrep.2017.05.009
    • NAID
      120006305989
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] DNA methylome analysis identifies transcription factor-based epigenomic signatures of multilineage competence in neural stem/progenitor cells.2017

    • Author(s)
      Sanosaka T, Imamura T, Hamazaki N, Chai M, Igarashi K, Ideta-Otsuka M, Miura F, Ito T, Fujii N, Ikeo K, Nakashima K.
    • Journal Title

      Cell Reports

      Volume: 20 Pages: 2992-2992

    • DOI
      10.1016/j.celrep.2017.08.086
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] An efficient method to generate conditional knockout cell lines for essential genes by combination of auxin-inducible degron tag and CRISPR/Cas9.2017

    • Author(s)
      Nishimura, K and Fukagawa T
    • Journal Title

      Chromosome Res.

      Volume: 25 Pages: 253-260

    • DOI
      10.1007/s10577-017-9559-7
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Association of M18BP1/KNL2 with CENP-A Nucleosome Is Essential for Centromere Formation in Non-mammalian Vertebrates.2017

    • Author(s)
      Hori T, Shang WH, Hara M, Ariyoshi M, Arimura Y, Fujita R, Kurumizaka H, Fukagawa T.
    • Journal Title

      Dev Cell

      Volume: 42 Pages: 181-189

    • DOI
      10.1016/j.devcel.2017.06.019
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Sequencing and phasing cancer mutations in lung cancers using a long-read portable sequencer2017

    • Author(s)
      Ayako Suzuki, Mizuto Suzuki, Junko Mizushima-Sugano, Martin C Frith, Wojciech Makatowski, Takashi Kohno, Sumio Sugano, Katsuya Tsuchihara & Yutaka Suzuki
    • Journal Title

      DNA Research

      Volume: 24 Issue: 6 Pages: 585-596

    • DOI
      10.1093/dnares/dsx027
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Locus-specific ChIP combined with NGS analysis reveals genomic regulatory regions that physically interact with the Pax5 promoter in a chicken B cell line.2017

    • Author(s)
      Fujita, T., Kitaura, F., Yuno, M., Suzuki, Y., Sugano, S., and Fujii, H.
    • Journal Title

      DNA Research

      Volume: 24 Pages: 537-548

    • DOI
      10.1093/dnares/dsx023
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Function and evolution of a Lotus japonicus AP2/ERF family transcription factor that is required for development of infection threads.2017

    • Author(s)
      Koji Yano, Seishiro Aoki, Meng Liu, Yosuke Umehara, Norio Suganuma, Wataru Iwasaki, Shusei Sato, Takashi Soyano, Hiroshi Kouchi and Masayoshi Kawaguchi.
    • Journal Title

      DNA Research

      Volume: 印刷中 Pages: 193-203

    • DOI
      10.1093/dnares/dsw052
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] F4/80+ macrophages contribute to clearance of senescent cells in the mouse postpartum uterus.2017

    • Author(s)
      Mahiro Egashira,Yasushi Hirota,Ryoko Shimizu-Hirota,Tomoko Saito-Fujita,Hirofumi Haraguchi,Leona Matsumoto,Mitsunori Matsuo,Takehiro Hiraoka,Tomoki Tanaka,Shun Akaeda,Chiaki Takehisa, Mayuko Saito-Kanatani, Kei-ichiro Maeda, Tomoyuki Fujii,Yutaka Osuga
    • Journal Title

      Endocrinology

      Volume: 158 Pages: 2344-2353

    • DOI
      10.1210/en.2016-1886
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Hypomethylated domain-enriched DNA motifs prepattern the accessible nucleosome organization in teleosts2017

    • Author(s)
      Ryohei Nakamura, Ayako Uno, Masahiko Kumagai, Shinichi Morishita and Hiroyuki Takeda
    • Journal Title

      Epigenetics & Chromatin

      Volume: 10 Pages: 44-44

    • DOI
      10.1186/s13072-017-0152-2
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Different contributions of local- and distant-regulatory changes to transcriptome divergence between stickleback ecotypes.2017

    • Author(s)
      Ishikawa, A., Kusakabe, M., Ravinet, M., Yoshida, K., Makino, T., Toyoda, A. Fujiyama, A., and Kitano, J.
    • Journal Title

      Evolution

      Volume: 71 Pages: 565-581

    • DOI
      10.1111/evo.13175
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] An ENU-induced p. C225S missense mutation in the mouse Tgfb1 gene does not cause Camurati-Engelmann disease-like skeletal phenotypes.2017

    • Author(s)
      Ichimura S, Sasaki S, Murata T, Fukumura R, Gondo Y, Ikegawa S, Furuichi T
    • Journal Title

      Exp. Anim.

      Volume: 66 Issue: 2 Pages: 137-144

    • DOI
      10.1538/expanim.16-0085
    • NAID
      130005635560
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Seasonal analysis of microbial communities in precipitation in the Greater Tokyo Area, Japan.2017

    • Author(s)
      Satoshi Hiraoka, Masaya Miyahara, Kazushi Fujii, Asako Machiyama, and Wataru Iwasaki.
    • Journal Title

      Frontiers in Microbiology

      Volume: 8 Pages: 1506-1506

    • DOI
      10.3389/fmicb.2017.01506
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Differential Binding of Three Major Human ADAR Isoforms to Coding and Long Non-Coding Transcripts.2017

    • Author(s)
      Josephine Galipon, Rintaro Ishii, Yutaka Suzuki, Masaru Tomita, and Kumiko Ui-Tei.
    • Journal Title

      Genes(Basel)

      Volume: 8 Issue: 2 Pages: 68-68

    • DOI
      10.3390/genes8020068
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Identification of physical interactions between genomic regions by enChIP-Seq.2017

    • Author(s)
      Fujita, T., Yuno, M., Suzuki, Y., Sugano, S., and Fujii, H.
    • Journal Title

      Genes to Cells

      Volume: 22 Pages: 506-520

    • DOI
      10.1111/gtc.12492
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Complete Genome Sequence of Super Biofilm-Elaborating Staphylococcus aureus Isolated in Japan.2017

    • Author(s)
      Yu L, Hisatsune J, Hirakawa H, Mizumachi E, Toyoda A, Yahara K, Sugai M.
    • Journal Title

      Genome Announc.

      Volume: 5 Issue: 41

    • DOI
      10.1128/genomea.01043-17
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Multiple Independent Changes in Mitochondrial Genome Conformation in Chlamydomonadalean Algae.2017

    • Author(s)
      Takashi Hamaji, Hiroko Kawai Toyooka, Atsushi Toyoda, Yohei Minakuchi, Masahiro Suzuki, Asao Fujiyama, Hisayoshi Nozaki and David Roy Smith.
    • Journal Title

      Genome Biology and Evolution

      Volume: 9 Issue: 4 Pages: 993-999

    • DOI
      10.1093/gbe/evx060
    • NAID
      120006358595
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A novel UBE2A mutation causes X-linked intellectual disability type Nascimento.2017

    • Author(s)
      Tsurusaki Y, Ohashi I, Enomoto Y, Naruto T, Mitsui J, Aida N, Kurosawa K.
    • Journal Title

      Hum Genome Var.

      Volume: 4 Pages: 17019-17019

    • DOI
      10.1038/hgv.2017.19
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Phagocytic Function of Macrophage-Enforcing Innate Immunity and Tissue Homeostasis.2017

    • Author(s)
      Hirayama D, Iida T, Nakase H.
    • Journal Title

      Int J Mol Sci.

      Volume: 19 Pages: 92-92

    • DOI
      10.3390/ijms19010092
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Evaluation of a novel fluorescent nanobeacon for targeted imaging of Thomsen-Friedenreich associated colorectal cancer.2017

    • Author(s)
      Nakase H, Sakuma S, Fukuchi T, Yoshino T, Mohri K, Miyata K, Kumagai H, Hiwatari KI, Tsubaki K, Ikejima T, Tobita E, Zhu M, Wilson KJ, Washington K, Gore JC, Pham W.
    • Journal Title

      Int J Nanomedicine.

      Volume: 12 Pages: 1747-1755

    • DOI
      10.2147/ijn.s124174
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Constitutive centromere-associated network controls centromere drift in vertebrate cells.2017

    • Author(s)
      Hori T, Kagawa N, Toyoda A, Fujiyama A, Misu S, Monma N, Makino F, Ikeo K, Fukagawa T.
    • Journal Title

      J Cell Biol.

      Volume: 1 Pages: 101-113

    • DOI
      10.1083/jcb.201605001
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Phylogeography of the yellowfin goby Acanthogobius flavimanus in native and non-native distributions.2017

    • Author(s)
      Shotaro Hirase, Sherrie Chambers, Kathryn Hassell, Melissa Carew, Vincent Pettigrove, Kiyoshi Soyano, Masaki Nagae, and Wataru Iwasaki.
    • Journal Title

      Marine Biology

      Volume: 164 Pages: 106-106

    • DOI
      10.1007/s00227-017-3137-6
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Population structure of Escherichia coli 026 : HII with recent and repeated stx2 acquisition in multiple lineages2017

    • Author(s)
      Ogura Yoshitoshi、Gotoh Yasuhiro、Itoh Takehiko、et al.
    • Journal Title

      Microb Genom

      Volume: 3

    • DOI
      10.1099/mgen.0.000141
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The complete mitochondrial genome sequence and phylogenetic analysis of Luciola lateralis, one of the most famous firefly in Japan (Coleoptera : Lampyridae)2017

    • Author(s)
      Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
    • Journal Title

      Mitochondrial DNA Part B

      Volume: 2 Pages: 546-547

    • DOI
      10.1080/23802359.2017.1365640
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The complete mitogenome and phylogenetic analysis of Japanese firefly ‘Genji Botaru’ Luciola cruciata (Coleoptera : Lampyridae)2017

    • Author(s)
      Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
    • Journal Title

      Mitochondrial DNA Part B

      Volume: 2 Pages: 522-523

    • DOI
      10.1080/23802359.2017.1365641
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Centromere evolution and CpG methylation during vertebrate speciation2017

    • Author(s)
      Ichikawa K, Tomioka S, Suzuki Y, Nakamura R, Doi K, Yoshimura J, Kumagai M, Inoue Y, Uchida Y, Irie N, Takeda H, Morishita S.
    • Journal Title

      Nature Communications

      Volume: 1833 Pages: 1722-1730

    • DOI
      10.1038/s41467-017-01982-7
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Generalist species drive microbial dispersion and evolution.2017

    • Author(s)
      Sira Sriswasdi, Ching-chia Yang, and Wataru Iwasaki.
    • Journal Title

      Nature Communications

      Volume: 8 Pages: 1162-1162

    • DOI
      10.1038/s41467-017-01265-1
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Complete fusion of a transposon and herpesvirus created the Teratorn mobile element in medaka fish2017

    • Author(s)
      Inoue Y, Saga T, Aikawa T, Kumagai M, Shimada A, Kawaguchi Y, Naruse K, Morishita S, Koga A, Takeda H.
    • Journal Title

      Nature Communications

      Volume: 8 Pages: 551-551

    • DOI
      10.1038/s41467-017-00527-2
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Novel GBEI mutation in a Japanese family with adult polyglucosan body disease2017

    • Author(s)
      Harigaya Y, Matsukawa T, Fujita Y, Mizushima K, Ishiura H, Mitsui J, Morishita S, Shoji M, Ikeda Y, Tsuji S.
    • Journal Title

      Neurology Genetics

      Volume: 3 Issue: 2

    • DOI
      10.1212/nxg.0000000000000138
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Profiling cancer-related gene mutations in oral squamous cell carcinoma from Japanese patients by targeted amplicon sequencing.2017

    • Author(s)
      Nakagaki T, Tamura M, Kobashi K, Kobashi K, Koyama R, Fukushima H, Ohashi T, Idogawa M, Ogi K, Hiratsuka H, Tokino T, Sasaki Y.
    • Journal Title

      Oncotarget

      Volume: 8 Pages: 59113-59122

    • DOI
      10.18632/oncotarget.19262
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quinone oxidoreductase 2 is involved in haustorium development of the parasitic plant Phtheirospermum japonicum.2017

    • Author(s)
      Ishida JK, Yoshida S, Shirasu K.
    • Journal Title

      Plant Signal Behav

      Volume: 12

    • DOI
      10.1080/15592324.2017.1319029
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Unlinking the methylome pattern from nucleotide sequence, revealed by large-scale in vivo genome engineering and methylome editing in medaka fish2017

    • Author(s)
      Napo K. M. Cheung, Ryohei Nakamura, Ayako Uno, Masahiko Kumagai, Hiroto S, Fukushima, Shinichi Morishita, Hiroyuki Takeda
    • Journal Title

      PLOS Genetics

      Volume: 13 Issue: 12

    • DOI
      10.1371/journal.pgen.1007123
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] RNA-sequencing-based transcriptome and biochemical analyses of steroidal saponin pathway in a completeset of Allium fistulosum-A. cepa monosomic addition lines2017

    • Author(s)
      Abdelrahman M, El-Sayed M, Sato S, Hirakawa H, Ito SI, Tanaka K, Mine Y, Sugiyama N, Suzuki Y, Yamauchi N, Shigyo M.
    • Journal Title

      PLoS One

      Volume: 12 Issue: 8

    • DOI
      10.1371/journal.pone.0181784
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] DEclust : A statistical approach for obtaining differential expression profiles of multiple conditions2017

    • Author(s)
      Aoto Yoshimasa、Hachiya Tsuyoshi、Okumura Kazuhiro、Hase Sumitaka、Sato Kengo、Wakabayashi Yuichi、Sakakibara Yasubumi
    • Journal Title

      PLoS One

      Volume: 12

    • DOI
      10.1371/journal.pone.0188285
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Assessment of the quality of DNA from various formalin-fixed paraffin-embedded (FFPE) tissues and the use of this DNA for next-generation sequencing (NGS) with no artifactual mutation.2017

    • Author(s)
      Einaga N, Yoshida A, Noda H, Suemitsu M, Nakayama Y, Sakurada A, Kawaji Y, Yamaguchi H, Sasaki Y, Tokino T, Esumi M.
    • Journal Title

      PLoS One

      Volume: 12

    • DOI
      10.1371/journal.pone.0176280
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Inter-species hormonal control of host root morphology by parasitic plants2017

    • Author(s)
      Spallek, T., Melnyk, C. W., Wakatake, T., Zhang, J., Sakamoto, Y., Kiba, T., Yoshida, S., Matsunaga, S., Sakakibara, H., Shirasu, K.
    • Journal Title

      PNAS

      Volume: 印刷中 Pages: 5283-5288

    • DOI
      10.1073/pnas.1619078114
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Multiple common and rare variants of ABCG2 cause gout.2017

    • Author(s)
      Higashino Toshihide、Takada Tappei、Nakaoka Hirofumi、Toyoda Yu、Stiburkova Blanka、Miyata Hiroshi、Ikebuchi Yuki、Nakashima Hiroshi、Shimizu Seiko、Kawaguchi Makoto、Sakiyama Masayuki、Nakayama Akiyoshi、Akashi Airi、Tanahashi Yuki、Kawamura Yusuke、Nakamura Takahiro、Wakai Kenji、Hosomichi Kazuyoshi 他
    • Journal Title

      RMD Open

      Volume: 3

    • DOI
      10.1136/rmdopen-2017-000464
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Genomic structure and evolution of the mating type locus in the green seaweed Ulva partita.2017

    • Author(s)
      Yamazaki T, Ichihara K, Suzuki R, Oshima K, Miyamura S, Kuwano K, Toyoda A, Suzuki Y, Sugano S, Hattori M, Kawano S.
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 11679-11679

    • DOI
      10.1038/s41598-017-11677-0
    • NAID
      120006380559
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A Comprehensive Mouse Transcriptomic BodyMap across 17 Tissues by RNA-seq.2017

    • Author(s)
      Li B, Qing T, Zhu J, Wen Z, Yu Y, Fukumura R, Zheng Y, Gondo Y, Shi L.
    • Journal Title

      Scientific Reports

      Volume: 7 Pages: 4200-4200

    • DOI
      10.1038/s41598-017-04520-z
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] CRISPR/Cas9-based knockouts reveal that CpRLP1 is a negative regulator of the sex pheromone PR-IP in the Closterium peracerosum-strigosum-littorale complex2017

    • Author(s)
      Kanda, N., Ichikawa, M., Ono, A., Toyoda, A., Fujiyama, A., Abe, J., Tsuchikane, Y., Nishiyama, T., Sekimoto, H.
    • Journal Title

      Scientific Reports

      Volume: 7 Pages: 17873-17873

    • DOI
      10.1038/s41598-017-18251-8
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Serotyping dengue virus with isothermal amplification and a portable sequencer.2017

    • Author(s)
      Yamagishi Junya、Runtuwene Lucky R.、Hayashida Kyoko、Mongan Arthur E.、Thi Lan Anh Nguyen、Thuy Linh Nguyen、Nhat Cam Nguyen、Limkittikul Kriengsak、Sirivichayakul Chukiat、Sathirapongsasuti Nuankanya、Frith Martin、Makalowski Wojciech、Eshita Yuki、Sugano Sumio、Suzuki Yutaka
    • Journal Title

      Scientific Reports

      Volume: 7 Pages: 3510-3510

    • DOI
      10.1038/s41598-017-03734-5
    • NAID
      120006337766
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Direct estimation of de novo mutation rates in a chimpanzee parent-offspring trio by ultra-deep whole genome sequencing2017

    • Author(s)
      Tatsumoto S, Go Y, Fukuta K, Noguchi H, Hayakawa T, Tomonaga M, Hirai H, Matsuzawa T, Agata K, Fujiyama A
    • Journal Title

      Scientific Reports

      Volume: 7 Pages: 13561-13561

    • DOI
      10.1038/s41598-017-13919-7
    • NAID
      120006358802
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Independent effects of ADH1B and ALDH2 common dysfunctional variants on gout risk.2017

    • Author(s)
      Sakiyama M, Matsuo H, Akashi A, Shimizu S, Higashino T, Kawaguchi M, Nakayama A, Naito M, Kawai S, Nakashima H, Sakurai Y, Ichida K, Shimizu T, Ooyama H, Shinomiya N.
    • Journal Title

      Scientific Reports

      Volume: 7 Pages: 2500-2500

    • DOI
      10.1038/s41598-017-02528-z
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Regnase-1 and Roquin Nonredundantly Regulate Thl Differentiation Cansing Cardiac Inflammation and Fibrosis.2017

    • Author(s)
      Cui, X., Mino, T., Yoshinaga, M., Nakatsuka, Y., Hia, F., Yamasoba, D., Tsujimura, T., Tomonaga, K., Suzuki, Y., Uehata, T., Takeuchi, O.
    • Journal Title

      The Journal of Immunology

      Volume: 199 Issue: 12 Pages: 4066-4077

    • DOI
      10.4049/jimmunol.1701211
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An emerging model organism Caenorhabditis elegans for alternative pre-mRNA processing in vivo.2017

    • Author(s)
      Shotaro Wani, Hidehito Kuroyanagi
    • Journal Title

      Wiley Interdiscip Rev RNA

      Volume: 印刷中

    • DOI
      10.1002/wrna.1428
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A Trichosporonales genome tree based on 27 haploid and three evolutionarily.2017

    • Author(s)
      Masako Takashima, Sira Sriswasdi, Ri-ichiroh Manabe, Moriya Ohkuma, Takashi Sugita, and Wataru Iwasaki.
    • Journal Title

      Yeast

      Volume: 35 Pages: 99-111

    • DOI
      10.1002/yea.3284
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A sodium binding system alleviates acute salt stress during seawater acclimation in eels.2017

    • Author(s)
      Marty Kwok Shing Wong, Takehiro Tsukada, Nobuhiro Ogawa, Supriya Pipil, Haruka Ozaki, Yutaka Suzuki, Wataru Iwasaki, and Yoshio Takei.
    • Journal Title

      Zoological Letters

      Volume: 3 Pages: 22-22

    • DOI
      10.1186/s40851-017-0081-8
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 神経幹細胞の運命制御におけるIncRNAの役割2017

    • Author(s)
      木下隆太、岸雄介、後藤由季子
    • Journal Title

      医薬ジャーナル, Clinical Calcium

      Volume: 27 Issue: 6

    • Related Report
      2017 Annual Research Report
  • [Journal Article] 変異蓄積モデルを利用した生殖系列変異の後世代影響の解析2017

    • Author(s)
      内村有邦、樋口真弓、八木健
    • Journal Title

      放射線生物研究

      Volume: 52 Issue: 4 Pages: 402-415

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comprehensive genetic exploration of selective tooth agenesis of mandibular incisors by exome sequencing.2017

    • Author(s)
      Yamaguchi T, Hosomichi K, Yano K, Kim YI, Nakaoka H, Kimura R, Otsuka H, Nonaka N, Haga S, Takahashi M, Shirota T, Kikkawa Y, Yamada A, Kamijo R, Park SB, Nakamura M, Maki K, Inoue I.
    • Journal Title

      Human Genom Variation

      Volume: 印刷中 Pages: 1005-1005

    • DOI
      10.1038/hgv.2017.5
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Clinical implications of SCN1A missense and truncation variants in a large Japanese cohort with Dravet syndrome.2017

    • Author(s)
      Ishii A, Watkins JC, Chen D, Hirose S, Hammer MF.
    • Journal Title

      Epilepsia.

      Volume: 58 Issue: 2 Pages: 282-290

    • DOI
      10.1111/epi.13639
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A de novo missense mutation of GABRB2 causes early myoclonic encephalopathy.2017

    • Author(s)
      Ishii A, Kang JQ, Schornak CC, Hernandez CC, Shen W, Watkins JC, Macdonald RL, Hirose S.
    • Journal Title

      J Med Genet.

      Volume: 54 Issue: 3 Pages: 202-11

    • DOI
      10.1136/jmedgenet-2016-104083
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Comprehensive microbiome analysis of tonsillar crypts in IgA nephropathy.2017

    • Author(s)
      Watanabe H, Goto S, Mori H, Higashi K, Hosomichi K, Takanashi N, Aizawa N, Yamada T, Inoue I, Kurokawa K, Narita I.
    • Journal Title

      Nephrol Dial Transplant.

      Volume: in press Pages: 2072-2079

    • DOI
      10.1093/ndt/gfw343
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Phylogenomics and Morphology of Extinct Paleognaths Reveal the Origin and Evolution of the Ratites.2017

    • Author(s)
      Yonezawa T, Segawa T, Mori H, Campos PF, Hongoh Y, Endo H, Akiyoshi A, Manabe M, Kohno N, Nishida S, Wu J, Jin H, Kishino H, Kurokawa K, Yoshifumi N, Tanabe H, Mukoyama H, Yoshida K, Rasoamiaramanana A, Yamagishi S, Hayashi Y, Yoshida A, Koike H, Akishinonomiya F, Willerslev E, Hasegawa M.
    • Journal Title

      Current Biology

      Volume: 27 Issue: 1 Pages: 1-10

    • DOI
      10.1016/j.cub.2016.10.029
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] ADARB1 catalyzes circadian A-to-I editing and regulates RNA rhythm.2017

    • Author(s)
      Hideki Terajima, Hikari Yoshitane, Haruka Ozaki, Yutaka Suzuki, Shigeki Shimba, Shinya Kuroda, Wataru Iwasaki, and Yoshitaka Fukada.
    • Journal Title

      Nature Genetics

      Volume: 7 Pages: 12926-12926

    • DOI
      10.1038/ng.3731
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Rapid and cost effective high-throughput sequencing for identification of germline mutation of BRCA1 and BRCA22017

    • Author(s)
      Ahmadloo S, Nakaoka H, Hayano T, Hosomichi K, You H, Utsuno E, Sangai T, Nishimura M, Matsushita K, Hata A, Nomura F, Inoue I.
    • Journal Title

      J Hum Genet

      Volume: 印刷中 Pages: 561-567

    • DOI
      10.1038/jhg.2017.5
    • NAID
      40021210379
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Genetic polymorphisms in Plasmodium falciparum chloroquine resistance genes, pfcrt and pfmdr1, in North Sulawesi, Indonesia2017

    • Author(s)
      Patrick Reteng, Visia Vrisca, Inka Sukarno, Ilham Habib Djarkoni, Jane Angela Kalangi, George Eduardo Jacobs, Lucky Ronald Runtuwene, Yuki Eshita, Ryuichiro Maeda, Yutaka Suzuki, Arthur Elia Mongan, Sarah Maria Warouw, Junya Yamagishi and Josef Tuda.
    • Journal Title

      BMC Res Notes

      Volume: 10 Pages: 147-147

    • DOI
      10.1186/s13104-017-2468-1
    • NAID
      120006473604
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Germline variants of prostate cancer in Japanese families.2017

    • Author(s)
      Hayano T, Matsui H, Ohtake N, Hosomichi K, Suzuki K, Inoue I.
    • Journal Title

      PLOS ONE

      Volume: 印刷中

    • DOI
      10.1371/journal.pone.0164233
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 改正個人情報保護法でゲノム研究はどう変わるか?2017

    • Author(s)
      清水佳奈, 山本奈津子, 川嶋実苗, 片山俊明, 荻島創一
    • Journal Title

      実験医学

      Volume: 35 Issue: 4 Pages: 600-605

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Genome evolution in the allotetraploid frog Xenopus laevis.2016

    • Author(s)
      Session AM, Toyoda A, Suzuki Y, Fujiyama A, Taira M, et al.
    • Journal Title

      Nature

      Volume: 538 Pages: 336-343

    • DOI
      10.1038/nature19840
    • NAID
      120006240046
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] A case of succinic semialdehyde dehydrogenase deficiency with status epilepticus and rapid regression.2016

    • Author(s)
      Horino A, Kawawaki H, Fukuoka M, Tsuji H, Hattori Y, Inoue T, Nukui M, Kuki I, Okazaki S, Tomiwa K, Hirose S.
    • Journal Title

      Brain Dev.

      Volume: 38 Issue: 9 Pages: 866-70

    • DOI
      10.1016/j.braindev.2016.03.010
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mitochondrial Genome Sequences of Four Strains of the Bloom-Forming Raphidophyte Heterosigma akashiw2016

    • Author(s)
      Ogura Y, Nakayama N, Hayashi T, Ueki S.
    • Journal Title

      Genome Announc.

      Volume: 4 Issue: 6

    • DOI
      10.1128/genomea.01288-16
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Complete Genome Sequence of a Phycodnavirus, Heterosigma akashiwo Virus Strain 53.2016

    • Author(s)
      Ogura Y, Hayashi T, Ueki S.
    • Journal Title

      Genome Announc.

      Volume: 4 Issue: 6

    • DOI
      10.1128/genomea.01279-16
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Complete Genome Sequence of Klebsiella oxytoca Strain JKo3.2016

    • Author(s)
      Iwase T, Ogura Y, Hayashi T, Mizunoe Y.
    • Journal Title

      Genome Announc.

      Volume: 4 Issue: 6

    • DOI
      10.1128/genomea.01221-16
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Phylogenetic Analysis of Enteroaggregative Escherichia coli Sequence Type 131.2016

    • Author(s)
      Imuta N, Ooka T, Seto K, Kawahara R, Koriyama T, Kojyo T, Iguchi A, Tokuda K, Kawamura H, Yoshiie K, Ogura Y, Hayashi T, Nishi J.
    • Journal Title

      J Chin Microbiol.

      Volume: 54(8) Issue: 8 Pages: 2128-2134

    • DOI
      10.1128/jcm.00711-16
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Complete Genome Sequence of Klebsiella pneumoniae YH43.2016

    • Author(s)
      Iwase T, Ogura Y, Hayashi T, Mizunce Y.
    • Journal Title

      Genome Announc.

      Volume: 4 Issue: 2

    • DOI
      10.1128/genomea.00242-16
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Genome sequence and analysis of the Japanese morning glory, Ipomoea nil.2016

    • Author(s)
      Hoshino A, Jayakumar V, Toyoda A, Noguchi H, Itoh T, Seki M, Kohara Y, Suzuki Y, Sugano S, Fujiyama A, Sakakibara Y, et al.
    • Journal Title

      Nat Commun,

      Volume: 7 Pages: 132395-132395

    • DOI
      10.1038/ncomms13295
    • NAID
      120005997914
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Control of transcriptional pausing by biased thermal fluctuations on repetitive genomic sequences.2016

    • Author(s)
      Imashimizu M, Afek A, Takahashi H, Lubkowska L, Lukatsky DB.
    • Journal Title

      Proc Natl Acad Sci USA

      Volume: 113(47) Issue: 47

    • DOI
      10.1073/pnas.1607760113
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] AgIn : measuring the landscape of CpG methylation ofindividual repetitive elements.2016

    • Author(s)
      Suzuki Y, Korlach J, Turner SW, Tsukahara T, Taniguchi J, Qu W, Ichikawa K, Yoshimura J, Yurino H, Takahashi Y, Mitsui J, Ishiura H, Tsuji S, Takeda H, Morishita S.
    • Journal Title

      Bioinformatics

      Volume: 32(19) Issue: 19 Pages: 2911-2919

    • DOI
      10.1093/bioinformatics/btw360
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Assessing Cell-to-Cell DNA Methylation Variability on Individual Long Reads.2016

    • Author(s)
      Qu W, Tsukahara T, Nakamura R, Yurino H, Hashimoto S, Tsuji S, Takeda H, Morishita S.
    • Journal Title

      Sci Rep.

      Volume: 6 Pages: 21317-21317

    • DOI
      10.1038/srep21317
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Parallel mitogenome sequencing alleviates random rooting effect in phylogeography.2016

    • Author(s)
      Shotaro Hirase, Hirohiko Takeshima, Mutsumi Nishida, and Wataru Iwasaki.
    • Journal Title

      Genome Biology and Evolution

      Volume: - Pages: 1267-1278

    • DOI
      10.1093/gbe/evw063
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Structural mechanism for light-driven transport by a new type of chloride ion pump, Nonlabens marinus rhodopsin-3.2016

    • Author(s)
      Toshiaki Hosaka, Susumu Yoshizawa, Yu Nakajima, Noboru Ohsawa, Masakatsu Hato, Edward F, DeLong, Kazuhiro Kogure, Shigeyuki Yokoyama, Tomomi Kimura-Someya, Wataru Iwasaki, and Mikako Shirouzu.
    • Journal Title

      Journal of Biological Chemistry

      Volume: 291 Pages: 17488-17495

    • DOI
      10.1074/jbc.m116.728220
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Metagenomics and bioinformatics in microbial ecology : Current status and beyond.2016

    • Author(s)
      Satoshi Hiraoka, Ching-chia Yang, and Wataru Iwasaki.
    • Journal Title

      Microbes and Environments

      Volume: 31 Pages: 204-212

    • NAID
      130005265061
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Flexible selection of diversified Na+/K+ATPase α-subunit isoforms for osmoregulation in teleosts.2016

    • Author(s)
      Marty Kwok-Shing Wong, Supriya Pipil, Haruka Ozaki, Yutaka Suzuki, Wataru Iwasaki, and Yoshio Takei.
    • Journal Title

      Zoological Letters

      Volume: 2 Pages: 15-15

    • DOI
      10.1186/s40851-016-0050-7
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Global deceleration of gene evolution following recent genome hybridizations in fungi.2016

    • Author(s)
      Sira Sriswasdi, Masako Takashima, Ri-ichiroh Manabe, Moriya Ohkuma, Takashi Sugita, and Wataru Iwasaki.
    • Journal Title

      Genome Research

      Volume: 26 Pages: 1081-1090

    • DOI
      10.1101/gr.205948.116
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Allelic imbalance in regulation of ANRIL through chromatin interaction at 9p21 endometriosis risk locus.2016

    • Author(s)
      Nakaoka H, Gurumurthy A, Hayano T, Ahmadloo S, Omer WH, Yoshihara K, Yamamoto A, Kurose K, Enomoto T, Akira S, Hosomichi K, Inoue I.
    • Journal Title

      PLOS Genet

      Volume: 1 Issue: 4 Pages: 1-23

    • DOI
      10.1371/journal.pgen.1005893
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Rtools : a web server for various secondary structural analyses on single RNA sequences.2016

    • Author(s)
      Michiaki Hamada, Yukiteru Ono, Hisanori Kiryu, Kengo Sato, Yuki Kato, Tsukasa Fukunaga, Ryota Mori, Kiyoshi Asai.
    • Journal Title

      Nucleic Acids Res

      Volume: 44

    • DOI
      10.1093/nar/gkw337
    • NAID
      120006346257
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Improved Aocuracy in RNA-Protein Rigid Body Docking by Incorporating Force Field for Molecular Dynamics Simulation into the Scoring Function.2016

    • Author(s)
      Junichi Iwakiri, Michiaki Hamada, Kiyoshi Asai, Tomoshi Kameda.
    • Journal Title

      J. Chem Theory Comput.

      Volume: 12(9) Issue: 9 Pages: 4688-4697

    • DOI
      10.1021/acs.jctc.6b00254
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] DFAST and DAGA : web-based integrated genome annotation tools and resources2016

    • Author(s)
      Tanizawa Y, Fujisawa T, Kamimuma E, Nakamura Y, Arita M.
    • Journal Title

      Bioscience of Microbiota, Food and Health

      Volume: 35 Issue: 4 Pages: 173-184

    • DOI
      10.12938/bmfh.16-003
    • NAID
      130005250038
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] An algorithm for aligning and clustering read mapping profiles of deep sequencing in non-coding RNA processing.2016

    • Author(s)
      Tsuchiya M, Amano K, Abe M, Seki M, Hase S, Sato K, Sakakibara Y.
    • Journal Title

      Bioinformatics

      Volume: 32 Issue: 12

    • DOI
      10.1093/bioinformatics/btw273
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Challenges raised by gene editing.2016

    • Author(s)
      Kazuto Kato.
    • Journal Title

      Issues in Science and Technoogy,

      Volume: XXXⅡ Issue: 4

    • Related Report
      2016 Annual Research Report
  • [Journal Article] ヒトゲノムデータの保護と利用に向けた仕組みづくり2016

    • Author(s)
      加藤和人, 山本奈津子
    • Journal Title

      実験医学

      Volume: 34 Issue: 16 Pages: 2670-2671

    • Related Report
      2016 Annual Research Report
  • [Presentation] Endophyte-mediated control of fungal pathogenesis in Arabidopsis thaliana2018

    • Author(s)
      Kuldanai Pathompitaknukul
    • Organizer
      5th Plant Genomics & Gene Editing Congress Asia
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Volvocine green algae inviting you to 200 MYA time travel for evolution of female-male and muticellularity2018

    • Author(s)
      Nozaki, H.
    • Organizer
      Biology Colloquium hosted by Graduate Students' Society, Department of Biological Sciences, Faulty of Science, National University of Singapore
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNA polymerase usage and mutagenesis2018

    • Author(s)
      大学保一
    • Organizer
      Indo-Japan conference on Epigenetics and human Disease
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Epigenetic regulation on centromere soecification and kinetochore assembly2018

    • Author(s)
      Tatsuo Fukagawa
    • Organizer
      Indo-Japan conference on Epigenetics and Human disease
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Comprehensive phenotype characterization of colon cancer with various combination of driver mutations2018

    • Author(s)
      Oshima M
    • Organizer
      International Conference of Asian Pacific Organization for Cancer Prevention (APOCP9)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Comprehensive phenotype characterization of intestinal tumors with various driver mutations2018

    • Author(s)
      Oshima M
    • Organizer
      International Society of Precision Cancer Medicine (ISPCM) Annual Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] What determines differences in regenerative abilities between mice and newts?2018

    • Author(s)
      T. Takeuchi
    • Organizer
      International Symposium on Regenerative Medicine at Nagasaki University
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Dissection of elements and machinery of architectural noncoding RNAs2018

    • Author(s)
      Tetsuro Hirose
    • Organizer
      Keystone Symposia (Noncoding RNAs : Form, Function, Physiology)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Phenotypic diversity and constraints in microbial adaptive evolution2018

    • Author(s)
      Chiara Furusawa
    • Organizer
      Les Houches School “Evolution of Diversity”
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Silkworm infection model to investigate the staphylococcal virulence system2018

    • Author(s)
      Chikara Kaito
    • Organizer
      Workshop to Understand Staphylococcus aureus Pathogenesis
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Establishment of Newt model using Iberian Ribbed Newt (Pleurodeles waltl) for Regeneration Research and more.2018

    • Author(s)
      T. Hayashi, Mie Nakajima, M. Kyakuno, I. Manabe, K. Doi, and T. Takeuchi
    • Organizer
      広島大学両生類研究センター国際シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] An algorithm for assembling human centromeres from long reads2018

    • Author(s)
      Yuta Suzuki
    • Organizer
      ADVANCES IN GENOME BIOLOGY AND TECHNOLOGY (AGBT)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Finding tandem repeat expansions in raw long reads2018

    • Author(s)
      Shinichi Morishita
    • Organizer
      ADVANCES IN GENOME BIOLOGY AND TECHNOLOGY (AGBT)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Personal diploid methylomes and transcriptomes via phased heterozygous variants and single-molecule real-time sequencing2018

    • Author(s)
      Yuta Suzuki
    • Organizer
      ADVANCES IN GENOME BIOLOGY AND TECHNOLOGY (AGBT)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Characterization of aberrant transcriptional regulations in lung cancers2018

    • Author(s)
      Ayako Suzuki, Sarun Sereewattanawoot, Yutaka Suzuki & Katsuya Tsuchihara
    • Organizer
      Advances in Genome Biology and Technology (AGBT) 2018 General Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Functional Genomics on Medicinal Plants2018

    • Author(s)
      Amit Rai, Kazuki Saito and Mami Yamazaki
    • Organizer
      International Plant and Animal Genome XXVI, San Diego
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identifying heterogeneity of ground state pluripotency in mouse embryonic stem cells2018

    • Author(s)
      Kyoji Horie(堀江恭二)
    • Organizer
      International Society for Stem Cell Research 2018 Annual Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Differences of canopy environment and stomatal conductance in sugar beet (Beta vulgaris)2018

    • Author(s)
      Usui Y., Hirota T., Kuwagata T., Taniguchi K., and Hirafuji M.
    • Organizer
      International Symposium on Agricultural Meteorology 2018
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Rice production, water use, and atmospheric feedbacks2018

    • Author(s)
      Ikawa, H.
    • Organizer
      International Symposium on Agricultural Meteorology 2018
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Chromatin regulation of neural stem cell fate during neocortical development2018

    • Author(s)
      Yusuke Kishi, Yukiko Gotoh
    • Organizer
      International Young Scientists Workshop on Neural Development and Stem Cells
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] High-Throughput SNP Discovery and Genotyping in Unique Genetic Stocks for Constructing a High Resolution Genetic Linkage Map of Allium cepa2018

    • Author(s)
      Masayoshi Shigyo, Shusei Sato, Hideki Hirakawa
    • Organizer
      Plant & Animal Genome Conference XXVI
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] MarpolBase : Construction of the Marchantia polymorpha Genome Database2018

    • Author(s)
      Takako Mochizuki, Yasuhiro Tanizawa, Hideki Nagasaki, Shohei Yamaoka, Ryuichi Nishihama, Takehiko Kanazawa, Takashi Ueda, Katsuyuki T. Yamato, Takayuki Kohchi, and Yasukazu Nakamura
    • Organizer
      Plant and Animal Genome XXVI
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Studies on skeletal muscle atrophy in space - what zebrafish experienced in a space tour.2018

    • Author(s)
      Fuminori Sato, Choi Minyong, Zi Wang, Quan Wu, Ikumi Fujita, Misato Iwase, Satoko Uchida, Toru Sakimura, Yasushi Kono, Masaki Shirakawa, Fumiaki Tanigaki, Masahiro Chatani, Akira Kudo, Akihisa Takahashi, Junya Kobayashi, Kiyomi Imamura, Terumi Horiuchi, Satoshi Furukawa, Tadashi Muratani, Sumio Sugano, Yutaka Suzuki, Fumio Matsuzaki, Koichi Kawakami, and Atsuko Sehara-Fujisawa.
    • Organizer
      CDB Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of a New Pipeline for Haplotype-Specific Expression : case-study in F1 reciprocal cross in pepper2018

    • Author(s)
      Andrea Ghelfi, Kenta Shirasawa, Sachiko Isobe, Munetaka Hosokawa
    • Organizer
      Intelligent Systems for Molecular Biology (ISMB) Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Developmental stage-dependent change of SMAD target genes defines the neural stem cell fate2018

    • Author(s)
      SAYAKO KATADA
    • Organizer
      NCU Global Young Investigator forum 2018
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Developing tools and database for microbial community analysis2018

    • Author(s)
      Mori H.
    • Organizer
      マイクロバイオーム研究開発の最前線
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 頭部神経系と栄養貯藏組織における栄養応答システムの協調機構の解明2018

    • Author(s)
      福山征光
    • Organizer
      金沢大学新学術創成研究機構 革新的統合バイオ研究コア 栄養・代謝研究ワークショップ
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 大腸菌進化実験を用いた進化的拘束の解析2018

    • Author(s)
      古澤力
    • Organizer
      生命の起源および進化学会第43回学術講演会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Integrated analysis of genomic and transcriptomic data in ovarian clear cell carcinoma2018

    • Author(s)
      Kosuke Yoshihara
    • Organizer
      第70回日本産科婦人科学会学術講演会 日韓台ジョイントシンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] エミュー(Dromaius novaehollandiae)を用いた性決定遺伝子の探索2018

    • Author(s)
      櫻井珠真呂、水島秀成、黒岩麻里
    • Organizer
      鳥ゼミ北海道セミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Regulation of surface expression dynamics of AMPA receptors and cognitive refinement processes by Arc.2018

    • Author(s)
      Okuno H, Ishii Y, Endo T, Minatohara K, Bito H.
    • Organizer
      日本生理学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] アゲハチョウの擬態に関わる色と紋様の進化2018

    • Author(s)
      藤原晴彦
    • Organizer
      日本農芸化学会2018
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] キンギョを用いた眼の形成機構の解明2018

    • Author(s)
      大森義裕
    • Organizer
      平成29年度蛋白研セミナー一網膜感覚研究のフロンティア
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 10X-Linked-reads、Mate-pairを活用したメタゲノムアセンブリ手法の開発2018

    • Author(s)
      梶谷 嶺, 小椋 義俊, 後藤 恭宏, 林 哲也, 伊藤 武彦
    • Organizer
      第12回ゲノム微生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Allium cepaにおける全ゲノム解読に向けた取り組みについて2018

    • Author(s)
      執行正義・Mostafa Abdelrahman・佐藤修正・平川英樹・辻村真衣・寺地徹・豊田敦
    • Organizer
      園芸学会平成30年度春季大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 食道癌患者におけるCirculating tumor DNAモニタリングシステムの検討2018

    • Author(s)
      岩谷 岳、遠藤 史隆、秋山 有史、千葉 丈広、馬場 誠朗、梅邑 晃、二階 春香、佐藤 慧、八重樫 瑞典、川岸 涼子、松尾 鉄平、木村 聡元、高原 武志、大塚 幸喜、新田 浩幸、水野 大、肥田 圭介、西塚 哲、佐々木 章
    • Organizer
      第118回日本外科学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Integrative Omics approach to elucidate camptothecin biosynthesis2018

    • Author(s)
      Amit Rai, Ryo Nakabayashi, Taiki Nakaya, Tetsuya Mori, Hideyuki Suzuki, Kazuki Saito and Mami Yamazaki
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 糸状菌Colletotrichum tofieldiaeの種内比較から明らかになったColletotrichum属菌の多様な宿主感染様式2018

    • Author(s)
      晝間敬、杉田亮平、田野井慶太朗、佐藤豊三、西條雄介
    • Organizer
      日本植物病理学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Colletotrichum endophyte-mediated control of fungal pathogenesis in Arabidopsis thaliana2018

    • Author(s)
      西條 雄介
    • Organizer
      平成30年日本植物病理学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ホウレンソウの雄決定遺伝子座周辺から見出された組換抑制領域の分子構造2018

    • Author(s)
      小野寺康之, 工藤友裕, 髙橋光彦, 長部高之, 豊田敦, 平川英樹, 鈴木穣, 近江戸伸子
    • Organizer
      園芸学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 線虫の温度馴化多様性と低温馴化を制御するK+チャネルの解析2018

    • Author(s)
      岡畑美咲、Aguan D. Wei、水口洋平、豊田敦、太田茜、久原篤
    • Organizer
      温度生物学若手の会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 正常な神経発生を破綻させて、発癌を引き起こす遺伝子の網羅的な探索2018

    • Author(s)
      高祖 秀登
    • Organizer
      次世代脳プロジェクト 冬のシンポジウム2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] Role and priming activity of Kmt2b for the spermatogonial stem cell epigenome.2018

    • Author(s)
      Tomizawa S, Kobayashi Y, Shirakawa T, Hoshi I, Nakajima K, Royo H, Peters AHFM, Anastassiadis K, Stewart AF, Ohbo K.
    • Organizer
      第123回日本解剖学会総会全国学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ライブラリ調製キット間におけるシーケンスバイアスの比較2018

    • Author(s)
      佐藤光彦, 小椋義俊, 中村佳司, 西田留梨子, 後藤恭宏, 林将大, 久恒順三, 菅井基行, 伊藤武彦, 林哲也
    • Organizer
      第12回日本ゲノム微生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Assessing the diversity of the Megaviridae giant viruses based on DNA polymerase gene.2018

    • Author(s)
      李岩沢, Hingamp H., 綿井博康, Blanc-Mathieu R., 吉田天士, 緒方博之
    • Organizer
      第12回日本ゲノム微生物学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Optimization of a DNA barcode method for a giant virus family.2018

    • Author(s)
      Prodinger F., 李岩沢, 森本大地, 大前公保, 富永賢人, Hingamp P., 吉田天士, 後藤康宏, 緒方博之
    • Organizer
      第12回日本ゲノム微生物学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 全自動培養システムを用いた多種ストレス環境下における大腸菌の大規模実験室進化2018

    • Author(s)
      前田智也, 堀之内貴明, 阪田奈津江, 小谷葉月, 酒井亜季, 田邊久美, 古澤力
    • Organizer
      第12回日本ゲノム微生物学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 微生物ゲノムアノテーションツールDFASTの開発2018

    • Author(s)
      谷沢靖洋、藤澤貴智、中村保一
    • Organizer
      第12回日本ゲノム微生物学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] クロマチン高次ドメイン構造分断機構の解明とiPS細胞におけるその応用2018

    • Author(s)
      辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、林松彦、豊田敦、岡野栄之、菱川慶一
    • Organizer
      第17回日本再生医療学会総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] MarpolBase : ゼニゴケゲノムデータベースの構築2018

    • Author(s)
      望月孝子、谷澤靖洋、長崎英樹、山岡尚平、西浜竜一、金澤建彦、上田貴志、大和勝幸、河内孝之、中村保一
    • Organizer
      第59回日本植物生理学会年会(札幌)
    • Related Report
      2017 Annual Research Report
  • [Presentation] カメムシと仲良くなった大腸菌は何が変わったのか?2018

    • Author(s)
      古賀隆一
    • Organizer
      第62回日本応用動物昆虫学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 翅形成遺伝子群は昆虫の背板縁形成に機能する2018

    • Author(s)
      大出高弘・三戸太郎・新美輝幸
    • Organizer
      第62回日本応用動物昆虫学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ライブラリ調製キット間におけるシーケンスバイアスの比較2018

    • Author(s)
      佐藤光彦, 小椋義俊, 中村佳司, 西田留梨子, 後藤恭宏, 林将大, 久恒順三, 菅井基行, 伊藤武彦, 林哲也
    • Organizer
      第91回日本細菌学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 野外群落環境における水稲根の水と窒素の吸収に関連する遺伝子の発現動態2018

    • Author(s)
      松波麻耶, 羽田野麻理, 林秀洋, 桑形恒男, 石川淳子
    • Organizer
      日本作物学会第245回講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 「クテドノバクテリア(綱)」のゲノム解析が明かにした新規二次代謝産物生合成の潜在能力2018

    • Author(s)
      鄭 宇、豊田 敦、水口 洋平、王 瓊渼、酒井 康輝、阿部 敬悦、横田 明、矢部 修平
    • Organizer
      日本農芸化学会2018年度 年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] トウガラシにおける種間交雑障壁に関与する遺伝子の探索2018

    • Author(s)
      梅林綾香・白澤健太・安井康夫・小枝壮太・山崎 彬・細川宗孝
    • Organizer
      園芸学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Towards Better Genome Annotation.2017

    • Author(s)
      Yasuhiro Tanizawa and Yasukazu Nakamura
    • Organizer
      Symposium on "Genome Evolution at Mishima"(GEM)
    • Place of Presentation
      三島
    • Year and Date
      2017-03-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Nanopore sequencing for convenient RNA Seq analysis2017

    • Author(s)
      Masahide Seki, Eri Katsumata, Yutaka Suzuki
    • Organizer
      Advances in Genome Biology and Technology 2017 General Meeting
    • Place of Presentation
      Florida, USA
    • Year and Date
      2017-02-13
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 個人情報保護法の改正について(パネリストとして話題提供)2017

    • Author(s)
      山本奈津子
    • Organizer
      文部科学省新学術領域 市民公開シンポジウム「生命科学研究の最前線~いのちのしくみに迫り、健康を守る~
    • Place of Presentation
      東京
    • Year and Date
      2017-01-15
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Recent Iegislative efforts to balance the use of large-scale personal genomic data and the protection of privacy in Japan.2017

    • Author(s)
      Natsuko Yamamoto
    • Organizer
      Advanced Genome Science International Symposium “The start of new genomics”
    • Place of Presentation
      東京
    • Year and Date
      2017-01-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Bacterial genome annotation web-platform DFAST-Toward faster genome publication.2017

    • Author(s)
      Yasuhiro Tanizawa and Yasukazu Nakamura
    • Organizer
      Advanced Genome Science International Symposium “The Start of New Genomics”
    • Place of Presentation
      東京
    • Year and Date
      2017-01-10
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Mouse genetics toward functional analysis.2017

    • Author(s)
      Shigeru Makino, Yoichi Gondo
    • Organizer
      2017 RIKEN MARC KMPC Workshop
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Enhancer trapping and calcium imaging reveal functional neuronal circuitries essential for fish behaviors.2017

    • Author(s)
      Kawakami, K.
    • Organizer
      2nd Malaysia Zebrafish Disease Model Workshop.
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Sweetpotato genome sequencing under TRAS collaboration2017

    • Author(s)
      TRAS Sweetpotato genome sequencing consortium(発表者・磯部祥子)
    • Organizer
      4th Plant Genomics Congress Asia
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Genetic analysis of gout : GWAS and candidate gene analysis.2017

    • Author(s)
      Hirotaka Matsuo
    • Organizer
      7th Oriental Gout Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Detection and analysis of spontaneous mutations in the standard mouse strain by complete outbreeding.2017

    • Author(s)
      Fukumura R, Kotaki H, Ishitsuka Y, Makino S, Nakai Y, Mori K, Toyoda A, Kuhara S, Fujiyama A, Gondo Y
    • Organizer
      Advanced Geome Science International Symposium ; The Start of New Genomics.
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Illegitimate translation from out-of-frame alleles created by CRISPR-Cas9 rescues KO lethality.2017

    • Author(s)
      Shigeru Makino, Kimiko Inoue, Masaru Tamura, Michiko Hirose, Yuichi Ishitsuka, Ryutaro Fukumura, Shigeru Wakana, Atsuo Ogura, Yoichi Gondo
    • Organizer
      AMMRA and AMPC Meeting 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular subtypes and evolution of colon cancer2017

    • Author(s)
      Oshima M
    • Organizer
      Annual Meeting of Singapore Gastric Cancer Consortium(SGCC)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Study of cardiac regeneration using new model newt Pleurodeles waltl.2017

    • Author(s)
      Toshinori Hayashi, Ayumi Myouga, Eri Tsuchiya, Shohei Azuma Yukio Sato and Takashi Takeuchi
    • Organizer
      Annual meeting of the Japanese Society of Developmental Biologists
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Metabolic regulation of RNA modification associated with human disease2017

    • Author(s)
      Tsutomu Suzuki
    • Organizer
      Cold Spring Harbor Asia "RNA modification and epitranscriptome"
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Emergence of embryonic origin of adult neural stem cells2017

    • Author(s)
      Yukiko Gotoh
    • Organizer
      EMBO Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Gene regulatory mechanisms in neural fate decisions2017

    • Author(s)
      Yukiko Gotoh
    • Organizer
      EMBO Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular pathogenesis of mitochondrial disease caused by tRNA modification deficiency2017

    • Author(s)
      Tsutomu Suzuki
    • Organizer
      FASEB science research conferences-Mitochondrial Biogenesis and Dynamics in Health, Disease and Aging
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Role of Nanos Proteins in Male Germ Cell Development2017

    • Author(s)
      Yumiko Saga
    • Organizer
      Gordon Research Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Genetics and genomics with mouse mutagenesis.2017

    • Author(s)
      Yoichi Gondo
    • Organizer
      IMB Seminar/Molecular & Celllular Biology Program
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Metabolic regulation of tRNA modification associated with human disease2017

    • Author(s)
      Tsutomu Suzuki
    • Organizer
      IMB symposium on Nucleic Acid Modification
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Malignant progression of colon cancer through genetic alterations associated with microenvironment generation2017

    • Author(s)
      Oshima M
    • Organizer
      International Conference of International Society of Gastrointestinal Carcinogenesis(ISGC)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular biological and genomics approach to reveal the genetic mechanism and evolution of Batesian mimicry supergene in Papilio butteflies.2017

    • Author(s)
      Fujiwara, H.
    • Organizer
      International Workwho “Butterfly as Genomic Models in Ecology and Evoution”
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Regulation of neural stem cell fate during development and in the adult2017

    • Author(s)
      Yukiko Gotoh
    • Organizer
      Italian Society for Neuroscience (SINS) Annual Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Epigenetic control of neural precursor cell fate2017

    • Author(s)
      Yukiko Gotoh
    • Organizer
      Keystone Symposia, Regenerative Biology and Applications
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The amygdalar and hippocampal functions in zebrafish The 2017 workshop on Zebrafish2017

    • Author(s)
      Kawakami, K.
    • Organizer
      Neural Circuits and Behavior
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] IRF Transcription factors in the development and function of mononuclear phagocytes2017

    • Author(s)
      Tamura T
    • Organizer
      NIH symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] SMRT sequencing for understanding centromeres, meta-methylome, and meta-mobilome2017

    • Author(s)
      Shinichi Morishita
    • Organizer
      SMRT SCIENTIFIC SYMPOSIUM
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The neuronal circuitry for prey capture in zebrafish : from visual stimuli to the hypothalamic feeding center.2017

    • Author(s)
      Kawakami, K.
    • Organizer
      The 10th Zebrafish Disease Models Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Post-transcriptional regulation of inflammation-related mRNAs by Regnase-1.2017

    • Author(s)
      Mino, T.
    • Organizer
      The 12th International Symposium of the Institute Network -Driving Next-Generation Medicine : the Spirit of Pioneering Discovery in Medical Science-.
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Understanding centromeres, metamethylome, and metamobilome using long read sequencing2017

    • Author(s)
      Shinichi Morishita
    • Organizer
      The 12th International Workshop on Advanced Genomics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] GENOMES AND GENEYICS OF PARASITIC PLANTS IN OROBANCHACEAE2017

    • Author(s)
      Satoko Yoshida
    • Organizer
      The 14th World Congress on Parasitic Plants
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular mechanisms underlying color vision and color formation in dragonflies.2017

    • Author(s)
      Futahashi Ryo
    • Organizer
      The 29th CDB Meeting "Mavericks, new models in developmental biology".
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Diversity and biogeography of marine giruses and their association with the biological carbon pump.2017

    • Author(s)
      Blanc-Mathieu R., Li Y., Kaneko H., Endo H., Ogata H.
    • Organizer
      The 3rd Ringberg Symposium on Giant Virus Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Enhancer trapping and calcium imaging reveal a functional neuronal circuit essential for the prey capture behavior : from visual stimuli to the hypothalamic feeding center.2017

    • Author(s)
      Kawakami, K.
    • Organizer
      The 5th Zebrafish Research Conference of China
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] New insights into the sexual reproduction in unicellular zygnematophycean alga, Closterium peracerosum-strigosum-littorale complex2017

    • Author(s)
      Sekimoto, H.
    • Organizer
      The 65th NIBB Conference Marchantia Workshop 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Towards unveiling pivotal roles of viruses in marine ecosystems.2017

    • Author(s)
      Ogata H., Blanc-Mathieu R., Hingamp P., Nishimura Y., Li Y., Yoshida T.
    • Organizer
      The 73rd Fujibara Seminar, International Conference “Molecular Life of Diatoms”
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] How do microbes spread across environmental barriers?2017

    • Author(s)
      Wataru Iwasaki
    • Organizer
      The 9th Asian Symposium on Microbial Ecology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Egg or sperm : how germ cell sex is determined.2017

    • Author(s)
      Yumiko Saga
    • Organizer
      The International Research Symposium on Regulation of Germ cell Development in vivo and in vitro
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Primordial follicles : insights from a study of RNA-binding proteins for its development and activation2017

    • Author(s)
      Yuzuru Kato
    • Organizer
      The International Research Symposium on Regulation of Germ cell Development in vivo and in vitro
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] New approach toward elucidation of the mechanisms for PGC determination in amphibian newts.2017

    • Author(s)
      Toshinori Hayashi, Mitsuki Kyakuno, and Takashi Takeuchi
    • Organizer
      The International Research Symposium on Regulation of Germ cell development in vivo and in vitro
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Growth factor signaling controls breast cancer stem-like cells and their niche2017

    • Author(s)
      Gotoh N
    • Organizer
      The Korean Sciety for Biochemistry and Molecular Biology (KSBMB) International Conference 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] egulation of astrocyte production in the mouse neocortex2017

    • Author(s)
      Yukiko Gotoh
    • Organizer
      XIII European Meeting on Glial Cells in Hearlth and Disease
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Sweetpotato genome sequencing under TRAS collaboration2017

    • Author(s)
      TRAS Sweetpotato genome sequencing consortium(発表者・磯部祥子)
    • Organizer
      XIX international botanial cogress
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Comprehensive phenotypic characterization of intestinal cancer with multiple driver mutations2017

    • Author(s)
      Oshima M
    • Organizer
      第48回高松宮妃癌研究基金国際シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] CpMinusl, mt-genome specific gene of heterothallic Closterium peracerosum-strigosum-littorale complex, is involved in the sex determination2017

    • Author(s)
      Tsuyuki, N., Komiya, A., Kanda, N., Tsuchikane, Y., Nishiyama, T., Sekimoto, H.
    • Organizer
      11th International Phycological Congress
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] CRISPR/CAS9-induced knockout in unicellular zygnematophycean alg, Closterium peracerosum-strigosum-littorale complex2017

    • Author(s)
      Kanda, N., Tsuyuki, N., Kon, S., Nishiyama, T., Tsuchikane, Y., Sekimoto, H.
    • Organizer
      11th International Phycological Congress
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Functional analyses of sex specific receptor-like proteins in Closterium peracerosum-strigosum-littorale complex, using CRISPR/CAS9 system2017

    • Author(s)
      Sekimoto, H., Kanda, N., Kon, S., Nishiyama, T., Tsuchikane, Y.
    • Organizer
      11th International Phycological Congress
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Activated IL6-STAT3 pathway in adenomyosis.2017

    • Author(s)
      Hirota Y, Hiraoka T, Saito-Fujita T, Harada M, Fujii T, Osuga Y.
    • Organizer
      13th World Congress of Endometriosis
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of a novel HIV-1 restriction factor which selectively degrades viral transcripts.2017

    • Author(s)
      Yamasoba, D., Sato, K., Uehata, T., Mino, T., Koyanagi, Y., Takeuchi, O.
    • Organizer
      18th Kumamoto AIDS seminar.
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Semaphorin signal via MICAL3 induces symmetrical cell division of cancer stem-like cells2017

    • Author(s)
      Gotoh N
    • Organizer
      2017 AACR Annual Meeting, Symposium “Tumor Stem Cell Biology”
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Rs671, a common variant of ALDH2, could play a protective role in the onset of gout.2017

    • Author(s)
      Mako Komatsu, Hirotaka Matsuo, Masayuki Sakiyama, Hirofumi Nakaoka, Sayo Kawai, Rieko Okada, Yuki Tanahashi, Hiroshi Ooyama, Seiko Shimizu, Nariyoshi Shinomiya
    • Organizer
      21st International Epidemiological Association (IEA) World Congress of Epidemiology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Natural variations of cold acclimation and analysis of KQT potassium channel in cold acclimation2017

    • Author(s)
      Misaki Okahata, Akane Ohta, Yohei Minakuchi, Atsushi Toyoda, Atsushi Kuhara
    • Organizer
      21th C. elegans International conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Isolation of genes required for cold acclimation2017

    • Author(s)
      Mayu Fujita, Shiori Sakai, Misaki Okahata, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara.
    • Organizer
      21th C. elegans International meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] What is the key developmental change for insect wing evolution?2017

    • Author(s)
      Ohde, T., Mito, T. and Niimi, T.
    • Organizer
      2nd Biennial Meeting of Pan-American Society for Evolutionary Developmental Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] SonicParanoid : extremely fast, easy and accurate orthology inference.2017

    • Author(s)
      Salvatore Cosentino and Wataru Iwasaki
    • Organizer
      5th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 16th European Conference on Computational Biology (ECCB)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genome-informed isolation of nitrite oxidizer Nitrotoga sp.2017

    • Author(s)
      Kento Ishii, Hirotsugu Fujitani, Tatsunori Nakagawa, Reiji Takahashi, Satoshi Tsuneda
    • Organizer
      5th International Conference on Nitrification
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genome-wide association study of clinically defined gout and subtypes identifies multiple susceptibility loci including transporter genes.2017

    • Author(s)
      Hirotaka Matsuo, Nakayama Akiyoshi, Hirofumi Nakaoka, Ken Yamamoto, Masayuki Sakiyama, Amara Shaukat, Yu Toyoda, Yukinori Okada, Yoichiro Kamatani, Masahiro Nakatochi, Takahiro Nakamura, Tappei Takada, Katsuhisa Inoue, Hiroshi Nakashima, Seiko Shimizu, Kawaguchi Makoto, Asahi Hishida, Kenji Wakai, Blanka Stiburkova, Lisa K. Stamp, Nicola Dalbeth, Tatsuo Hosoya, Ituro Inoue, Atsushi Takahashi, Michiaki Kubo, Hiroshi Ooyama, Toru Shimizu, Kimiyoshi Ichida, Tony R. Merriman, Nariyoshi Shinomiya
    • Organizer
      67th Annual Meeting of the American Society of Human Genetics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Exome sequencing of cancer -related genes to identify genetic markers for sensitivity to cytotoxic anticancer drugs.2017

    • Author(s)
      Udagawa C, Sasaki Y, Suemizu H, Ohnishi Y, Ohnishi H, Tokino T, Zembutsu H.
    • Organizer
      American Association of Cancer Research(AACR, 米国癌学会)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Targeted exome sequences of cancer-related genes in human cancers using amplicon sequencing.2017

    • Author(s)
      Sasaki Y, Nakagaki T, Tamura M, Fukushima H, Ikeda H, Koyama R, Idogawa M, Tokino T
    • Organizer
      American Association of Cancer Research(AACR, 米国癌学会)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Dynamically switching proteein interaction network during M-phase in vet¥rtebrate kinetochores2017

    • Author(s)
      Masatoshi Hara, Tatsuo Fukagawa
    • Organizer
      ASCB Annual Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] enChIP using CRISPR : a method for identification of molecules interacting with a locus of interest.2017

    • Author(s)
      Fujita, T. and Fujii, H.
    • Organizer
      Cell Symposia, CRISPR : From Biology to Technology and Novel Therapeutics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] De novo metagenome assembly and methylome of the human gut microbiome using SMRT sequencing2017

    • Author(s)
      Yoshihiko Suzuki
    • Organizer
      Cold Spring Harbor Laboraotry, Biology of Genomes
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Investigating non-canonical DNA modification in an animal model using single-molecule real-time sequencing2017

    • Author(s)
      Yusuke Takahashi
    • Organizer
      Cold Spring Harbor Laboraotry, Biology of Genomes
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genome-wide kinetic analysis of pre-mRNA processing in living animals2017

    • Author(s)
      Eichi Watabe, Hidehito Kuroyanagi
    • Organizer
      CSHL Meetings/40 Years of mRNA Splicing : From Discovery to Therapeutics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Kmt2b is required for spermatogenesis through both bivalent and monovalent priming of the spermatogonial stem cell epigenome.2017

    • Author(s)
      Tomizawa S, Kobayashi Y, Shirakawa T, Hoshi I, Nakajima K, Royo H, Peters AHFM, Anastassiadis K, Stewart AF, Ohbo K
    • Organizer
      EMBO conference : Nuclear structure and dynamics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] enomic Consequences of the Indo-Pacific Vicariance in Coral Reef benthic organisms2017

    • Author(s)
      Nina Yasuda, Yukihiro Higashimura, Coralie Taquet, Satoshi Nagai, Handoko Adi Susanto, Miguel Fortes, Suharsono, Niphon Phongsuwan, Kazuo Nadaoka, Yoshihisa Suyama, Chika Mitsuyuki, Hideaki Yuasa, Catherine Vogler, GertWorhide,
    • Organizer
      European Coral Reef Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Profiling cancer-related gene alterations in Japanese multiple myeloma patients by targeted amplicon sequencing.2017

    • Author(s)
      Fukushima H, Sasaki Y, Tamura M, Ikeda H, Ishiguro K, Tokino T.
    • Organizer
      European Human Genetics Conference 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Regulation of non-coding RNA contributes to the complete cessation of cell proliferation of neuron-like cells.2017

    • Author(s)
      Takuya IMAMURA
    • Organizer
      France Japan Epigenetics Workshop 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] VITCOMIC2 : Visualization tool for the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing2017

    • Author(s)
      Mori H, Maruyama T, Yano M, Yamada T, Kurokawa K.
    • Organizer
      GIW 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Post-transcriptional suppression of Dazl via its 3' UTR plays an important role in pre-implantation embryonic development.2017

    • Author(s)
      Kurumi Fufuda
    • Organizer
      Gordon Research Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Primordial follicle formation : insights from a study of an RNA-binding protein.2017

    • Author(s)
      Yuzuru Kato
    • Organizer
      Gordon Research Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Role of DDX6-mediated P-body formation in male germ cell development.2017

    • Author(s)
      Ryuki Shimada
    • Organizer
      Gordon Research Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Local structure changes of the influenza A virus ribonucleoprotein complex by a mutation in the specific residue involved in the efficient genome packaging2017

    • Author(s)
      Naoki Takizawa
    • Organizer
      IUMS2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Onset symptoms and germline mutation variation in neurofibromatosis type22017

    • Author(s)
      寺西裕, 宮脇哲, 岡野淳, 高柳俊作, 武笠晃丈, 中冨浩文, 斉藤延人
    • Organizer
      NF Conference 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Bacterial genome annotation web-platform DFAST : Toward faster genome publication2017

    • Author(s)
      Y Tanizawa, T Fujisawa, M Arita, Y Nakamura
    • Organizer
      NIG International Symposium 2017 Commemorationg the 30th Anniversary of DDBJ. Life, Environment, and Evolution Revealed by Genomes
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] VITCOMIC2 : visualization of the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing2017

    • Author(s)
      Mori H, Maruyama T, Yano M, Yamada T, Kurokawa K.
    • Organizer
      ProkaGenomics 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Roles of Arc/arg3.1 on surface expression dynamics of AMPA receptors during structural plasticity and on cognitive refinement processes.2017

    • Author(s)
      Okuno H, Ishii Y, Endo T, Uehara M, Suzuki Y, Minatohara K, Araki A, Abe M, Imayoshi I, Kakeyama M, Sakimura K, Bito H.
    • Organizer
      Society for Neuroscience
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Correlation between the critical day-length and the period of circadian clock in Japanese short-day duckweeds.2017

    • Author(s)
      Tomoaki Muranaka, Hiroshi Kudoh, Tokitaka Oyama
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Detection and analysis of spontaneous mutations in the C57BL/6JJcl strain by complete outbreeding.2017

    • Author(s)
      Fukumura R, Ishitsuka Y, Makino S, Nakai Y, Mori K, Toyoda A, Kuhara S, Fujiyama A, Gondo Y
    • Organizer
      The 12th International Workshop on Advanced Genomics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Illegitimate translation revealed by CRISPR-Cas9 genome editing : The genome-edited proteins rescue the knockout phenotype.2017

    • Author(s)
      Yoichi Gondo, Shigeru Makino, Kimiko Inoue, Michiko Hirose, Yuichi Ishitsuka, Ryutaro Fukumura, Atsuo Ogura
    • Organizer
      The 12th International Workshop on Advanced Genomics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Profiling cancer-related gene mutations in oral squamous cell carcinoma from Japanese patients by targeted amplicon sequencing2017

    • Author(s)
      Sasaki Y, Nakagaki T, Tamura M, Kobashi K, Koyama R, Fukushima F, Idogawa M, Ogi K, Hiratsuka H, Tokino T
    • Organizer
      The 12th International Workshop on Advanced Genomics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Capturing Alternative Secondary Structures of RNA by Decomposition of Base Pairing Probabilities2017

    • Author(s)
      Taichi Hagio, Shun Sakuraba, Junichi Iwakiri, Ryota Mori, Kiyoshi Asai
    • Organizer
      The 28th International conference on Genome Informatics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] DFAST : a flexible prokaryotic genome annotation pipeline for faster genome publication2017

    • Author(s)
      Y Tanizawa, T Fujisawa, Y Nakamura
    • Organizer
      The 28th International Conference on Genome Informatics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] U6 snRNA m6A stabilizes 5' splice site recognition2017

    • Author(s)
      Yuma Ishigami, Takayuki Ohira, Shin-ichiro Akichika, Takeo Suzuki, Yutaka Suzuki, Tsutomu Suzuki
    • Organizer
      The 43rd Naito Conference- Noncoding RNA : Biology, Chemistry, & Diseases
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Pulmonary Regnase-1 functions as a posttranscriptional switch in anti-bacterial immunity.2017

    • Author(s)
      Nakatsuka, Y., Mino, T., Yoshinaga, M., Uehata, T., Sato, A., Handa, T., Chin, K., Hirai, T., Takeuchi, O.
    • Organizer
      The 5th Annual Meeting of the International Cytokine and Interferon Society
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The amygdalar and hippocampal functions in zebrafish2017

    • Author(s)
      Koichi Kawakami
    • Organizer
      The 5th European Zebrafish Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] CpMinusl, mating-type minus genome specific gene of Closterium peracerosum-strigosum-littorale complex, promotes mt- phenotype2017

    • Author(s)
      Tsuyuki, N., Komiya, A., Kanda, N., Tsuchikane, Y., Nishiyama, T., Sekimoto, H.
    • Organizer
      The 65th NIBB Conference Marchantia Workshop 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] MarpolBase : Genome Database for Marchantia polymorpha2017

    • Author(s)
      Y Tanizawa, T Mochizuki, Y Nakamura
    • Organizer
      The 65th NIBB Conference : Renaissance of Marchantia polymorpha
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Novel AHDC1 mutations cause intellectual disability and developmental delay2017

    • Author(s)
      Tsurusaki Y, Enomoto Y, Ida K, Kurosawa K
    • Organizer
      The American Society of Human Genetics Annual Meeting 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Transcription factor IRF8 governs enhancer landscape dynamics during mononuclear phagocyte development2017

    • Author(s)
      Kurotaki D, Nakabayashi J, Nishiyama A, Sasaki H, Kaneko N, Kawase W, Ozato K, Suzuki Y, Tamura T
    • Organizer
      The Annual Meeting of the American Association of Immunologists 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Role of DDX6-mediated P-body formation in NANOS2 function2017

    • Author(s)
      Ryuki Shimada
    • Organizer
      The International Research Symposium on Regulation of Germ cell Development in vivo and in vitro
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Biology of a picoeukaryotic phytoplankton, Parmales(Bolidophyceae), a sister group of diatoms2017

    • Author(s)
      桑田 晃, 一宮睦雄, 吉川伸哉, 山田和正, 河地正伸, Mary-Hélène Noël, 斉藤 憲治, 中村 洋路, 沢田健, Adriana Lopes dos Santos, Daniel Vaulot
    • Organizer
      The IVth International Conference "Molecular Life of Diatoms"
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Morphological and transcriptome analysis in cell wall formation of Triparma laevis2017

    • Author(s)
      吉川伸哉, 佐藤晋也, 山崎誠司, 山田和正, 一宮睦雄, 斉藤 憲治, 中村 洋路, 佐藤直樹, 桑田 晃
    • Organizer
      The IVth International Conference "Molecular Life of Diatoms"
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Examining genetic divergence of closely related Crown-of-Thorns starfish species between Indian and Pacific Ocean using whole genome data.2017

    • Author(s)
      Hideaki Yuasa, Rei Kajitani, Kazuki Takahashi, Dai Yoshimura, Takehiko Itoh, Yoshitoshi Ogura, Tetuya Hayashi, Zac Forsman, Nalinee Thongtham, Niphon Phongsuwan, Coralie Taquet, Marc Taquet, Nina Yasuda
    • Organizer
      The Third Asia Marine Biology Symposium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Evaluation of the utilization of blood collection tubes for cell-free DNA research2017

    • Author(s)
      Fumitaka Endo, Takeshi Iwaya, Takehiro Chiba, Mizunori Yaegashi, Kei Sato, Kohei Kume, Atsuhiro Arisue, Yutaka Nishinari, Ryoko Kawagishi, Takenori Segawa, Satoshi Nishizuka, Akira Sasaki.
    • Organizer
      アメリカ癌学会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Mutation detection by target sequence analyses using tissue-specific panels in esophageal squamous cell carcinoma2017

    • Author(s)
      Takeshi Iwaya, Fumitaka Endo, Kohei Kume, Yasushi Sasaki, Takashi Tokino, Satoshi Nishizuka
    • Organizer
      アメリカ癌学会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Loss of RNA degradation factors upon Salmonella infection stabilizes nuclear long non-coding RNAs2017

    • Author(s)
      秋光信佳
    • Organizer
      内藤カンファレンス
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Discovery of a silicified scaly bolidophyte, the novel lineage matching with the hypothetical ancestor of diatoms2017

    • Author(s)
      山田和正, 山崎誠司, 佐藤晋也, 吉川伸哉, 桑田 晃, 一宮睦雄
    • Organizer
      第11回国際藻類学会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Human gut microbiome associated with colorectal cancer2017

    • Author(s)
      山田 拓司
    • Organizer
      第76回日本癌学会学術総会(日本、横浜)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Studies on skeletal muscle regeneration and atrophy? What zebrafish experienced in a space tour.2017

    • Author(s)
      Fuminori Sato, Choi Minyong, Zi Wang, Quan Wu, Ikumi Fujita, Misato Iwase, Satoko Uchida, Toru Sakimura, Yasushi Kono, Masaki Shirakawa, Fumiaki Tanigaki, Masahiro Chatani, Akira Kudo, Akihisa Takahashi, Junya Kobayashi, Kiyomi Imamura, Terumi Horiuchi, Satoshi Furukawa, Tadashi Muratani, Sumio Sugano, Yutaka Suzuki, Fumio Matsuzaki, Koichi Kawakami, and Atsuko Sehara-Fujisawa
    • Organizer
      第12回研究所ネットワーク国際シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Molecular mechanism and evolution of female-limited and polymorphic Batesain mimicry in Papilio polytes.2017

    • Author(s)
      Fujiwara, H., Nishikawa, H., Iijima, T., Kajitani, R. and Ito, T.
    • Organizer
      19th Annual Meeting of the Society of Evolutionary Studiies
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] がん関連線維芽細胞による乳がん幹細胞維持機構の解析2017

    • Author(s)
      後藤典子
    • Organizer
      2017生命科学系学会合同年次総会(ConBio2017)
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 個体レベルで行う mRNA前駆体プロセシングの動態の解析2017

    • Author(s)
      渡部 栄地、黒柳 秀人
    • Organizer
      2017年度生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] トンボの紫外線反射の分子機構2017

    • Author(s)
      二橋亮
    • Organizer
      2017年度生命科学系学会合同年次大会ConBio2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] コンポストから分離された次世代放線菌「クテドノバクテリア」の魅力2017

    • Author(s)
      矢部修平
    • Organizer
      2017年度日本生物工学会北日本支部 札幌シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] クロマチン制御による神経幹細胞の運命制御機構2017

    • Author(s)
      岸雄介、後藤由季子
    • Organizer
      Active Motif Tokyo Chromatin Club 2nd Meeting
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Adult neural stem cells and their embryonic origin2017

    • Author(s)
      後藤由季子
    • Organizer
      Cell Press Lablinks, Stem Cells in Disease Modeling and Therapeutics
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 長鎖ncRNAによるほ乳類エピゲノム制御2017

    • Author(s)
      今村拓也
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Polycomb複合体による神経幹細胞の運命制御機構2017

    • Author(s)
      岸雄介、壼井將史、平林祐介、衛藤光、桑山尚大、古関明彦、後藤由季子
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Regulation of neural stem/progenitor cell fate2017

    • Author(s)
      後藤由季子
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] セントロメア形成に関与する遺伝学・エピ遺伝学2017

    • Author(s)
      深川竜郎
    • Organizer
      ConBIO2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 神経発生をin vivoで理解するための技術開発-非造血系組織の生体内における発生理解に向けて-2017

    • Author(s)
      岸雄介
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ショウジョウバエにおけるNeo性染色体の進化 : 性染色体は有害か?2017

    • Author(s)
      野澤昌文
    • Organizer
      ConBio2017ワークショップ・多細胞動物における性決定システムの多様性と進化
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 長鎖ノンコーディングRNAから学ぶ人工RNAデザイン2017

    • Author(s)
      秋光信佳
    • Organizer
      ConBio2018
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] IPAを活用した血球細胞分化を制御する転写因子の研究2017

    • Author(s)
      黒滝 大翼
    • Organizer
      Ingenuityユーザーミーティング
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] NGSによるHLA/KIRタイピングの現状と展望2017

    • Author(s)
      細道一善
    • Organizer
      第1回関東HLA研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 内生糸状菌とシロイヌナズナのリン栄養依存的な共棲関係の理解及びその効果の強化に向けて2017

    • Author(s)
      畫間敬、西條雄介
    • Organizer
      環境微生物系学会合同大会2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 制約と方向性をどのように理解するかー理論的背景2017

    • Author(s)
      古澤力
    • Organizer
      シンポジウム「進化の制約と方向性」
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 多様な選択圧下での大腸菌進化実験による揺らぎー応答関係の定量解析2017

    • Author(s)
      古澤力
    • Organizer
      シンポジウム「進化の制約と方向性」
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ヒト腸内細菌と大腸がん発病モデル2017

    • Author(s)
      山田 拓司
    • Organizer
      日本マイクロバイオームコンソーシアム(JMBC)設立記念シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ストレス抵抗における長鎖ノンコーディングRNAの機能に関する研究2017

    • Author(s)
      秋光信佳
    • Organizer
      放射線若手の会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ショウジョウバエゲノムと遺伝学で性染色体の進化をどこまで理解できるか?2017

    • Author(s)
      野澤昌文
    • Organizer
      遺伝研研究集会・進化遺伝学における実験的研究と理論的研究の融合
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 筋維持・萎縮機構の研究 : 宇宙から学ぶこと2017

    • Author(s)
      瀬原淳子
    • Organizer
      宇宙科学談話会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] アゲハの多様な擬態 : 色と紋様の形成メカニズム2017

    • Author(s)
      藤原晴彦
    • Organizer
      宇都宮大学オプトバイオシンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] データベース・カルチャーコレクションでひもとく微生物の進化2017

    • Author(s)
      岩崎渉
    • Organizer
      環境微生物系学会合同大会2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 人為的進化系を利用した細菌の病原性システムの理解2017

    • Author(s)
      垣内 力
    • Organizer
      生命科学系学会合同年次大会ConBio2017 シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] RNA修飾によるエピトランスクリプトーム制御と疾患2017

    • Author(s)
      鈴木 勉
    • Organizer
      千里ライフサイエンスセミナー : 生命を司り、操る~ノンコーディングRNAの底知れぬ力
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 神経幹細胞の運命制御2017

    • Author(s)
      後藤由季子
    • Organizer
      大阪大学微生物研究所・部員会共催ブリッジセミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 実験室内進化モデルを利用して、哺乳類の進化の過程を理解する2017

    • Author(s)
      内村有邦
    • Organizer
      第10回Evo-Devo青年の会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 大腸菌の人工進化実験における表現型・遺伝子型の網羅的解析2017

    • Author(s)
      古澤力
    • Organizer
      第16回 微生物研究会-微生物の多様な生き様にせまる
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 卵巣明細胞癌における新規治療標的融合遺伝子の網羅的探索2017

    • Author(s)
      吉原弘祐、田村亮、森裕太郎、山脇芳、須田一暁、石黒竜也、榎本隆之
    • Organizer
      第16回日本婦人科がん分子標的研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] IRF転写因子による単核貪食細胞の分化・応答制御と疾患2017

    • Author(s)
      田村 智彦
    • Organizer
      第1回 東京理科大-横浜市大合同シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] サンゴ礁無無脊椎動物の初期生態と集団進化に関する研究2017

    • Author(s)
      安田仁奈
    • Organizer
      第20回日本サンゴ礁学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 北方針葉樹の標髙に沿った適応 : 遺伝的基盤の解明に向けて2017

    • Author(s)
      後藤 晋
    • Organizer
      第28回Qecoセミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 超髙速ゲノムリシーケンシングによる変異検出の現状と問題点2017

    • Author(s)
      権藤洋一
    • Organizer
      第31回東海大学医学部基礎医学系懇談会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Cancer stem-like cells derived from breast cancer or lung cancer2017

    • Author(s)
      後藤典子
    • Organizer
      第33回日本毒性病理学会総会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] マウスとイモリを用いた再生の研究~再生能の違いは何が決めるのか?2017

    • Author(s)
      竹内隆
    • Organizer
      第3回幹細胞研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Regulation of neural stem cell fate during development and in the adult,2017

    • Author(s)
      後藤由季子
    • Organizer
      第40回日本神経科学大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Nuclear mutant p53 induces colon cancer progression through induction of aberrant and invasive tumor glands2017

    • Author(s)
      Oshima M
    • Organizer
      第40回日本分子生物学会・第90回日本生化学会(ConBio2017)
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ニューロンにおけるエピゲノム制御とその破綻2017

    • Author(s)
      今村拓也
    • Organizer
      第44回日本毒性学会学術大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 共生微生物の代謝系がもたらす昆虫の環境適応2017

    • Author(s)
      深津武馬
    • Organizer
      第44回日本毒性学会学術年会シンポジウム「ケミカルエコロジーと毒性学」
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] IRF transcription factors in the development and function of mononuclear phagocytes2017

    • Author(s)
      Tamura T
    • Organizer
      第46回 日本免疫学会学術集会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] C. elegansにおいて静止期前駆細胞の活性化を制御する食餌中の栄養分子と遺伝子の解明2017

    • Author(s)
      福山征光
    • Organizer
      第50回日本発生生物学会 シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 脳を作る神経幹細胞の運命制御2017

    • Author(s)
      後藤由季子
    • Organizer
      第54回日本臨床分子医学会学術集会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 大規模実験室進化とオミックス解析による大腸菌のストレス耐性機構の解析2017

    • Author(s)
      堀之内貴明, 前田智也, 古澤力
    • Organizer
      第69回生物工学会大会シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 核内長鎖ノンコーディングRNAの分解制御を通じた病原体抵抗機構2017

    • Author(s)
      秋光信佳
    • Organizer
      第69回日本細胞生物学会大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] クロマチン制御による神経幹細胞の運命制御機構2017

    • Author(s)
      岸雄介、平林祐介、衛藤光、桑山尚大、鈴木穣、古関明彦、後藤由季子
    • Organizer
      第69回日本細胞生物学会大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 筋維持・萎縮機構の研究 : 宇宙から学ぶこと2017

    • Author(s)
      瀬原淳子
    • Organizer
      第6回実験動物科学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Combination of driver mutations for malignant invasion and metastasis2017

    • Author(s)
      Oshima M
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ゲノム解析技術の革新と医学・医療へのインパクト~次世代シーケンサーによるHLA遺伝子解析と可能性~2017

    • Author(s)
      細道一善
    • Organizer
      第8回あきた免疫・移植・感染症研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] IL6-STAT3経路の活性化が子宮腺筋症の進展に寄与する2017

    • Author(s)
      廣田泰, 平岡毅大, 大須賀穣
    • Organizer
      第90回日本内分泌学会学術総会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 増殖因子によるがん幹細胞とそのニッチ制御の分子機構2017

    • Author(s)
      後藤典子
    • Organizer
      第9回シグナルネットワーク研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 宇宙科学から探る筋萎縮機構2017

    • Author(s)
      瀬原淳子
    • Organizer
      第9回分子骨格筋代謝研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 大腸菌実験室進化とオミックス解析を用いて大腸菌の適応進化過程を解析する2017

    • Author(s)
      堀之内貴明, 前田智也, 古澤力
    • Organizer
      第五回NGS現場の会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 転写因子IRF8による単核貪食細胞の分化制御そしてCMLとの関わり2017

    • Author(s)
      田村 智彦
    • Organizer
      東京血液懇話会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 脳をつくる神経幹細胞の運命制御2017

    • Author(s)
      後藤由季子
    • Organizer
      東京大学生命科学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 共生・進化・多様性2017

    • Author(s)
      深津武馬
    • Organizer
      日本学術会議シンポジウム「進化学と自然史博物館」
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 非モデル昆虫のエボデボ研究2017

    • Author(s)
      新美輝幸
    • Organizer
      日本進化学会第19回大会シンポジウム“エボデボから見る非モデル生物研究の魅力”
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ハマウツボ科寄生植物の寄生器官の発生と形づくり2017

    • Author(s)
      吉田聡子
    • Organizer
      日本農芸化学会第177回中部支部会シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 植物に寄生する植物 : 寄生植物の宿主の見つけ方2017

    • Author(s)
      吉田聡子
    • Organizer
      日本分子生物学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 分子遺伝学的視点から見た蝶の斑紋パターンの形成メカニズム-絵画を描くように-2017

    • Author(s)
      藤原晴彦
    • Organizer
      明治大学MIMS共同研究集会 : 自然に現れる紋様、形態の統合的理解
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Regulation of embryonic and adult neural stem cell fate2017

    • Author(s)
      後藤由季子
    • Organizer
      理研エピジェネティクスセミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 神経幹細胞の運命制御2017

    • Author(s)
      後藤由季子
    • Organizer
      立命館大学システム視覚科学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Identification of a novel HIV-1 restriction factor which selectively degrades viral transcripts.2017

    • Author(s)
      Yamasoba, D., Sato, K., Uehata, T., Mino, T., Koyanagi, Y., Takeuchi, O
    • Organizer
      2017 Annual Meeting of Japanese Society for Immunology.
    • Related Report
      2017 Annual Research Report
  • [Presentation] Interactions between Regnase-1 and Roquin Regulate Helper T Cell Polarization.2017

    • Author(s)
      Cui, X., Mino, T., Yoshinaga, M., Uehata, T., Nakatsuka, Y., Takeuchi, O.
    • Organizer
      2017 Annual Meeting of Japanese Society for Immunology.
    • Related Report
      2017 Annual Research Report
  • [Presentation] Regnase-1 regulates inflammation-related mRNAs during pioneer rounds of translation.2017

    • Author(s)
      Mino, T., Takeuchi, O.
    • Organizer
      2017 Annual Meeting of Japanese Society for Immunology.
    • Related Report
      2017 Annual Research Report
  • [Presentation] 新規培養株の確立により示されたパルマ藻の系統的多様性2017

    • Author(s)
      山田和正, 山﨑誠司, 佐藤晋也, 吉川伸哉, 桑田 晃, 一宮睦雄
    • Organizer
      2017年 日本プランクトン学会・日本ベントス学会合同大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 血球系前駆細胞における早期系譜決定のエピジェネティック制御2017

    • Author(s)
      黒滝 大翼
    • Organizer
      2017年度 生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] CRISPRを利用したin vitro enChIP法の開発およびゲノム領域間相互作用の検出への応用2017

    • Author(s)
      藤田敏次、藤井穂高
    • Organizer
      2017年度 生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Identification of potential regulatory mutations using multi-omics analysis and haplotyping of lung adenocarcinoma cell lines2017

    • Author(s)
      Sarun Sereewattanawoot, Ayako Suzuki, Masahide Seki, Takashi Kohno, Sumio Sugano, Katsuya Tsuchihara & Yutaka Suzuki
    • Organizer
      2017年度 生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 神経活動依存的に発現する遺伝子Hr38はCREBの下流で長期記憶の形成を促進する2017

    • Author(s)
      坂本 沙紀, 箕口 昌杜, 大村 知世, 岩見 雅史, 木矢 剛智
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] Regnase-1 maintains iron homeostasis via the destabilization of iron-regulatory transcripts.2017

    • Author(s)
      Yoshinaga, M., Mino, T., Takeuchi, O.
    • Organizer
      Consortium of Biological Sciences (ConBio) 2017.
    • Related Report
      2017 Annual Research Report
  • [Presentation] 微生物群集の系統組成推定・描画ツールVITCOMIC2の開発と応用2017

    • Author(s)
      森宙史
    • Organizer
      NGS現場の会第五回研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] NGS情報解析のための公開プラットフォーム提案2017

    • Author(s)
      権藤洋一、福村龍太郎、中井祐治
    • Organizer
      NGS現場の会第5回研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] WGSを用いた近交系マウスC57BL/JJclに生じる自然発生突然変異/SNV検出と公開2017

    • Author(s)
      福村龍太郎、小瀧逸人、石塚祐一、牧野茂、中井祐治、森一樹、久原哲、豊田敦、藤山秋佐夫、権藤洋一
    • Organizer
      NGS現場の会第5回研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] WGSを用いた日本産野生マウス由来近交系MSM/Msにおける自然突然変異の検出2017

    • Author(s)
      中井祐治、福村龍太郎、金相完、森一樹、門田雅代、目加田和之、田代康介、久原哲、吉木淳、豊田敦、藤山秋佐夫、権藤洋一
    • Organizer
      NGS現場の会第5回研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] NGSを使用した古人骨ゲノム解析-浜中2遺跡出土オホーツク文化人骨の研究事例-2017

    • Author(s)
      佐藤丈寛、安達登、木村亮介、米田穣、太田博樹、田嶋敦、豊田敦、松前ひろみ、小金渕佳江、清水健太郎、埴原恒彦、ウェーバー・アンジェイ、加藤博文、石田肇
    • Organizer
      NGS現場の会第5回研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ライブラリ調製キットNextera XTによるシーケンスバイアスと細菌のGC含量の関係2017

    • Author(s)
      佐藤光彦, 小椋義俊, 中村佳司, 西田留梨子, 後藤恭宏, 久恒順三, 菅井基行, 伊藤武彦, 林哲也
    • Organizer
      NGS現場の会第5回研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] SonicParanoid : 超高速・簡単・正確なオルソログ同定2017

    • Author(s)
      Salvatore Cosentino and Wataru Iwasaki
    • Organizer
      NGS現場の会第五回研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 内因性抗原提示におけるRegnase-1の役割2017

    • Author(s)
      岩井紀貴, 三野享史, 竹内理
    • Organizer
      RNAフロンティアミーティング2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] Exploring the RNA regulational landscape via codon optimality.2017

    • Author(s)
      Hia, F., Takeuchi, O.
    • Organizer
      The 19th RNA meeting of the RNA Society of Japan.
    • Related Report
      2017 Annual Research Report
  • [Presentation] SMG1 regulates inflammatory mRNAs through Regnase-1-mediated mRNA decay.2017

    • Author(s)
      Mino, T., Iwai, N., Akaki, K., Yamashita, A., Takeuchi, O.
    • Organizer
      The 19th RNA meeting of the RNA Society of Japan.
    • Related Report
      2017 Annual Research Report
  • [Presentation] Identification of an interferon inducible RNA binding protein as a restriction factor of HIV-1.2017

    • Author(s)
      Yamasoba, D., Sato, K., Uehata, T., Mino, T., Koyanagi, Y., Takeuchi, O.
    • Organizer
      The 65th Annual Meeting of the Japanese Society for Virology
    • Related Report
      2017 Annual Research Report
  • [Presentation] 日本産短日性ウキクサにみられる概日リズム周期と花成限界日長の負の相関2017

    • Author(s)
      Tomoaki Muranaka, Tokitaka Oyama
    • Organizer
      時間生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 日本産短日性アオウキクサにおける花成限界日長と概日リズム周期の相関2017

    • Author(s)
      村中智明、工藤洋、小山時隆
    • Organizer
      種生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] フレームシフト変異マウスを利用した翻訳開始点の解析2017

    • Author(s)
      牧野茂、井上貴美子、廣瀬美智子、石塚祐一、福村龍太郎、小倉淳郎、権藤洋一
    • Organizer
      第30回モロシヌス研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 食道扁平上皮癌パネルを用いた変異解析の有用性の検討2017

    • Author(s)
      岩谷 岳、遠藤 史隆、西塚 哲、秋山 有史、高原 武志、大塚 幸喜、新田 浩幸、肥田 圭介、水野 大、佐々木 章
    • Organizer
      第72回消化器外科学会総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Exploitation of a liquid biopsy system using circulating tumor DNA in esophageal cancer patients2017

    • Author(s)
      Takeshi Iwaya, Fumitaka Endo, Yasushi Sasaki, Mizunori Yaegashi, Takehiro Chiba, Yuji Akiyama, Mari Masuda, Tesshi Yamada, Takashi Tokino, Satoshi Nishizuka
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 家族性大腸腺腫症オルガノイドを用いた発がん機構解明2017

    • Author(s)
      八尾 良司、小柳 潤、長山 聡、野田 哲生
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 同一症例からの原発巣および転移巣由来のオルガノイドを利用した機能解析2017

    • Author(s)
      長山 聡、八尾 良司
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 神経線維腫症2型の遺伝的背景解明に向けた変異遺伝子解析および臨床解析2017

    • Author(s)
      寺西裕, 宮脇哲, 岡野淳, 高柳俊作, 武笠晃丈, 中冨浩文, 斉藤延人
    • Organizer
      日本人類遺伝学会 第62回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 神経線維腫症2型の遺伝的背景解明に向けた取り組み(変異遺伝子解析および臨床関連解析)2017

    • Author(s)
      寺西裕, 宮脇哲, 岡野淳, 高柳俊作, 武笠晃丈, 中冨浩文, 斉藤延人
    • Organizer
      日本脳神経外科学会 第76回学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ニガウリ雌性花着花率に関するQTL解析の試み2017

    • Author(s)
      三宅真佑子、鈴木翔太、福島舞、谷合直樹、宮城徳道、太郎良和彦、浦崎直也、松村英生
    • Organizer
      日本育種学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ほとんどの自然発生突然変異は弱有害である2017

    • Author(s)
      権藤洋一
    • Organizer
      日本遺伝学会第89回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] マウスGli3ゲノム編集変異は定型外翻訳によって致死表現型をレスキューする2017

    • Author(s)
      牧野茂、井上貴美子、田村勝、廣瀬美智子、石塚祐一、福村龍太郎、若菜茂晴、小倉淳郎、権藤洋一
    • Organizer
      日本遺伝学会第89回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 日本産野生マウス由来近交系MSM/Msにおける自然発生突然変異の検出2017

    • Author(s)
      福村龍太郎、中井祐治、金相完、森一樹、門田雅世、目加田和之、田代康介、久原哲、吉木淳、豊田敦、藤山秋佐夫、内村有邦、権藤洋一
    • Organizer
      日本遺伝学会第89回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Dissecting the network of viral RNAs in influenza A virus virion2017

    • Author(s)
      滝沢 直己
    • Organizer
      第65回日本ウイルス学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] イトマキヒトデの卵成熟前後におけるmRNA3'末端の網羅的解析2017

    • Author(s)
      野川 駿, 岩永 紗弥, 梶谷 嶺, 越智 洋絵, 鈴木 穣, 千葉 和義, 伊藤 武彦
    • Organizer
      日本動物学会第88回富山大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ショートリードを用いたりピート配列のde novo検出法の開発2017

    • Author(s)
      田中 良樹, 梶谷 嶺, 豊田 敦, 後藤 友二, 久保田 宗一郎, 伊藤 武彦
    • Organizer
      日本動物学会第88回富山大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] トンボの色覚・体色の多様性と環境適応2017

    • Author(s)
      二橋亮
    • Organizer
      日本動物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Post-transcriptional suppression of Dazl via its 3' UTR plays an important role in pre-implantation embryonic development.2017

    • Author(s)
      Kurumi Fufuda
    • Organizer
      日本発生生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Requirement of DDX6-mediated P-body formation in male germ cell development2017

    • Author(s)
      Ryuki Shimada
    • Organizer
      日本発生生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] マウス生殖細胞分化に必須なRNA結合タンパク質の機能を司る構造基盤の解析2017

    • Author(s)
      Danelle Wright
    • Organizer
      日本分子生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 生殖細胞特異的NANOS2-DND1経路の体細胞における再構成2017

    • Author(s)
      Takamasa Hirano
    • Organizer
      日本分子生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 日本産野生マウス由来近交系MSM/Msにおける自然突然変異の検出2017

    • Author(s)
      福村龍太郎, 中井祐治, 金相完, 森一樹, 門田雅世, 目加田和之, 田代康介, 久原哲, 吉木淳, 豊田敦, 藤山秋佐夫, 権藤洋
    • Organizer
      遺伝学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] MeDIP-seqによるハクサイ系統間のDNAメチル化比較解析2017

    • Author(s)
      藤本 龍 ; 高橋 聡史 ; 鈴木 穣 ; 関 原明 ; 安田 剛志
    • Organizer
      園芸学会平成29年度秋期大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Developmental stage-dependent change of SMAD target genes defines the neural stem cell lineage2017

    • Author(s)
      SAYAKO KATADA
    • Organizer
      釜山-九大合同シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] ゲノムから推定する遅増殖性Nitrotogaの活性促進因子2017

    • Author(s)
      石井 挙人, 藤谷 拓嗣, 常田 聡
    • Organizer
      環境微生物系学会合同大会2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] Phenotypic Constraints Shaped by Evolution : Numerical and Experimental Approaches2017

    • Author(s)
      Chikara Furusawa, Kunihiko Kaneko, Takaaki Horinouchi, Tomoya Maeda
    • Organizer
      生物物理学会 第55回年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Regnase-1 は鉄代謝関連のmRNAを分解することで鉄恒常性を維持する2017

    • Author(s)
      吉永正憲, 三野享史, 竹内理
    • Organizer
      第19回 日本 RNA 学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] On the evolutionary origin of insect wings : comparison of development between basal pterygote and apterygote insects.2017

    • Author(s)
      Ohde, T. and Niimi T.
    • Organizer
      第10回Evo-Devo青年の会
    • Related Report
      2017 Annual Research Report
  • [Presentation] クロマチン制御による神経幹細胞の運命制御機構2017

    • Author(s)
      岸雄介、平林祐介、衛藤光、桑山尚大、鈴木穣、古関明彦、後藤由季子
    • Organizer
      第11回日本エピジェネティクス研究会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 大量データに対応した微生物群集の系統組成推定・描画ツールVITCOMIC22017

    • Author(s)
      森宙史, 丸山貴之, 矢野雅大, 黒川顕
    • Organizer
      第11回日本ゲノム微生物学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 全自動培養システムを用いた多種ストレス環境化における大腸菌進化ダイナミクスの解析2017

    • Author(s)
      前田智也, 堀之内貴明, 阪田奈津江, 小谷葉月, 酒井亜季, 田邊久美, 古澤力
    • Organizer
      第16回微生物研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 大腸がん発病に伴うヒト腸内細菌のマルチオミクス解析2017

    • Author(s)
      山田 拓司
    • Organizer
      第17回日本抗加齢医学会総会(日本、東京)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 個体レベルで行うmRNA前駆体プロセシングの動態の解析2017

    • Author(s)
      渡部 栄地、黒柳 秀人
    • Organizer
      第19回日本RNA学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] IncRNA-mRNAの網羅的相互作用予測へ向けた高速なRNA-RNA相互作用予測ソフトウェアRIblastの開発2017

    • Author(s)
      福永 津嵩、岩切 淳一、小野 幸輝、浜田 道昭
    • Organizer
      第19回日本RNA学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] IncRNAの組織特異的な発現に関与するTransposable Elementの同定2017

    • Author(s)
      千島 崇史, 岩切 淳一, 浜田 道昭
    • Organizer
      第19回日本RNA学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ヒトIncRNA-RNAの網羅的相互作用予測及びデータベースの構築2017

    • Author(s)
      福永 津嵩, 岩切 淳一, 小野 幸輝, 浜田 道昭
    • Organizer
      第19回日本RNA学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 単核貪食細胞系におけるIRF8の発現に重要な新規遠位エンハンサーの同定2017

    • Author(s)
      Sasaki H, Nishiyama A, Kurotaki D, Tamura T
    • Organizer
      第1回 東京理科大-横浜市大合同シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 転写因子IRF8は造血早期において樹状細胞系譜への分化をエピジェネティックに制御する2017

    • Author(s)
      川瀬 航, 黒滝 大翼, 中林 潤, 西山 晃, Herbert C. Morse III, Keiko Ozato, 鈴木 穣, 田村 智彦
    • Organizer
      第1回 東京理科大-横浜市大合同シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 最も早期の樹状細胞前駆細胞の同定2017

    • Author(s)
      川瀬 航, 黒滝 大翼, 中林 潤, Herbert C. Morse III, Keiko Ozato, 鈴木 穣, 田村 智彦
    • Organizer
      第28回 日本生体防御学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Apoptotic signaling regulates temperature tolerance in nervous system2017

    • Author(s)
      Tomoyo Ujisawa, Akane Ohta, Tatsuya Li, Yohei Minakuchi, Katsushi Arisaka, Atsushi Toyoda, Miki Ii, Atsushi Kuhara
    • Organizer
      第40回 日本神経科学大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Tfap2c-Bmp7遺伝子座で互いに反目方向に並ぶ2つのCTCF結合クラスターは、クロマチンの隣接コンタクトドメインを分断し、かつ内部コンタクトパターンに関与する2017

    • Author(s)
      辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、豊田敦、岡野栄之、菱川慶一
    • Organizer
      第40回日本分子生物学会年会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 自己免疫応答におけるRNAサイレンシング活性の調節機構とそれに伴う遺伝子発現変動2017

    • Author(s)
      中野悠子、高橋朋子、尾野本浩司、米山光俊、程久美子
    • Organizer
      第40回日本分子生物学会年会/ConBio2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] 大腸がん発病に伴うヒト腸内細菌のマルチオミクス解析2017

    • Author(s)
      山田 拓司
    • Organizer
      第42回 日本医用マススペクトル学会(日本、東京)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 変異蓄積マウス系統を用いた生殖系列変異の解析2017

    • Author(s)
      内村有邦、樋口真弓、水口洋平、豊田敦、西野穣、八木健
    • Organizer
      第42回中国地区放射線影響研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] A novel distal enhancer responsible for Irf8 expression in the mononuclear phagocyte lineage2017

    • Author(s)
      Sasaki H, Nishiyama A, Kurotaki D, Tamura T
    • Organizer
      第46回 日本免疫学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] LGP2 upregulates apoptosis-related genes functions by acting as an RNA silencing modulator during viral infection.2017

    • Author(s)
      Tomoko Takahashi, Yuko Nakano, Koji Onomoto, Chiaki Komori, Mitsutoshi Yoneyama, Kumiko Ui-Tei
    • Organizer
      第46回日本免疫学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] マダラシミの胚発生期における幼若ホルモン関連遺伝子群の発現解析2017

    • Author(s)
      峯村俊儀・大出高弘・新美輝幸・塩月孝博・大門髙明
    • Organizer
      第62回日本応用動物昆虫学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ヒト腸内細菌データベースとその利用2017

    • Author(s)
      山田 拓司
    • Organizer
      第69回 日本生物工学会大会(日本、東京)
    • Related Report
      2017 Annual Research Report
  • [Presentation] STAT3 is crucial for the entire process of uterine regeneration in a mouse model of decellularized matrix transplantation.2017

    • Author(s)
      Hiraoka T, Hirota Y, Fujita T, Akaeda S, Tanaka T, Matsuo M, Matsumoto L, Haraguchi H, Osuga Y, Fujii T.
    • Organizer
      第69回日本産科婦人科学会学術講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Uterine extracellular matrix is a useful material for normai uterine regeneration in a mouse model od decellularized matrix2017

    • Author(s)
      Takehisa C, Hirota Y, Hiraoka T, Fujita T, Haraguchi H, Matsumoto L, Matsuo M, Akaeda S, Tanaka T, Osuga Y, Fujii T.
    • Organizer
      第69回日本産科婦人科学会学術講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Estimation of mapping parameters for PAR-CLIP data using LAST-TRAIN2017

    • Author(s)
      Mei Takeda, Junichi Iwakiri, Michiaki Hamada
    • Organizer
      第6回生命医薬情報学連合大会(IIBMP)
    • Related Report
      2017 Annual Research Report
  • [Presentation] Identification of Transposable Elements which contribute to tissue specific expression of lncRNAs2017

    • Author(s)
      Takafumi Chishima, Junichi Iwakiri, Michiaki Hamada
    • Organizer
      第6回生命医薬情報学連合大会(IIBMP)
    • Related Report
      2017 Annual Research Report
  • [Presentation] Cancer genome phasing for regulatory mutations and allelic transcriptional imbalances using long read sequencing2017

    • Author(s)
      Ayako Suzuki, Sarun Sereewattanawoot, Yutaka Suzuki & Katsuya Tsuchihara
    • Organizer
      第76回 日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Identification of novel therapeutically targetable fusion transcripts in ovarian clear cell carcinoma2017

    • Author(s)
      Kosuke Yoshihara, Yutaro Mori, Kaoru Yamawaki, Tatsuya Ishiguro, Takayuki Enomoto
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 口腔扁平上皮癌の全エクソン解析2017

    • Author(s)
      佐々木泰史, 田村みゆき, 中垣貴文, 小山良太, 井戸川雅史, 荻和弘, 平塚博義, 仲瀬裕志, 時野隆至
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 神経活動依存的に発現する遺伝子Hr38 はCREBの下流で長期記憶の形成を促進する2017

    • Author(s)
      坂本 沙紀, 箕口 昌杜, 大村 知世, 岩見 雅史, 木矢 剛智
    • Organizer
      第88回日本動物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱細胞化組織移植技術を用いたマウス子宮再生における転写因子STAT3の役割2017

    • Author(s)
      平岡毅大, 廣田泰, 藤田知子, 田中智基, 赤枝俊, 松尾光徳, 松本玲央奈, 原口広史, 大須賀穣, 藤井知行
    • Organizer
      第90回日本内分泌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] フレームシフト変異アレルからの定型外翻訳によるタンパク質発現2017

    • Author(s)
      牧野茂、井上貴美子、廣瀬美智子、石塚祐一、福村龍太郎、小倉淳郎、権藤洋一
    • Organizer
      日本ゲノム編集学会第2回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] トランスポゾン関連ドメインをもつ新規遺伝子サイレンシング因子の同定2017

    • Author(s)
      Ikeda, Y., Pélissier, T., Bourguet, P., Becker, C., Pouch-Pélissier, M. N., Pogorelcnik, R., Weingartner, M., Weigel, D., Deragon, J. M. and Mathieu, O.
    • Organizer
      日本遺伝学会第89回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] オオムギの形質転換効率に関わる遺伝子単離に向けたDNAマーカー開発2017

    • Author(s)
      久野 裕1、宗森 広美1、元井 由加1、新海 典夫2、瀬々 潤2、豊田 敦3、佐藤 和広
    • Organizer
      日本育種学会第131回講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] RNA配列設計のための情報解析技術2017

    • Author(s)
      浅井潔
    • Organizer
      日本核酸医薬学会第3回年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 異なる水稲品種による群落が大気の熱環境に及ぼす影響2017

    • Author(s)
      伊川浩樹, 桑形恒男
    • Organizer
      日本気象学会2017年度秋季大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] モデル寄生植物コシオガマの変異体原因遺伝子同定2017

    • Author(s)
      Songkui Cui、重信秀治、西山智明、柴田朋子、長谷部光泰、白須賢、吉田聡子
    • Organizer
      日本植物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] CRISPR/Cas9による、ヒメミカヅキモの性特異的受容体型タンパク質の機能解析2017

    • Author(s)
      神田奈保、今詩織、藤原安理、西山智明、土金勇樹、関本弘之
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] パルマ藻Triparma Iaevisの細胞壁形成機構の解析2017

    • Author(s)
      吉川伸哉, 佐藤晋也, 山崎誠司, 一柳紀凛, 山田和正, 一宮睦雄, 斉藤 憲治, 中村 洋路, 佐藤直樹, 桑田 晃
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ヒメミカヅキモの性決定におけるCpMinusl遺伝子の逆遺伝学的解析2017

    • Author(s)
      露木奈津美、神田奈保、小宮あゆみ、川井絢子、土金勇樹、西山智明、関本弘之
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 珪藻の進化・繁栄の謎を握る未知の藻類 : パルマ藻の多様性と全球分布2017

    • Author(s)
      桑田 晃, 一宮睦雄, 吉川伸哉, Daniel Vaulot, Adriana Lopes dos Santos
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 性特異的遺伝子から明らかにするミカヅキモの進化2017

    • Author(s)
      土金 勇樹, 土松 隆志, Shakya Mangal Man, 関本 弘之
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 同質六倍体サツマイモ栽培種のゲノム解読に向けた取り組み2017

    • Author(s)
      白澤健太, 長崎英樹, 田中 勝, 岡田吉弘, 髙畑康浩, 平川英樹, 磯部祥子
    • Organizer
      日本植物学会第81回大会シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] Ethylene signaling controls haustorium development in parasitic plant Phtheirospermum japonicum2017

    • Author(s)
      Songkui Cui, Ken Shirasu, Satoko Yoshida
    • Organizer
      日本植物生理学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Host lignin composition affects haustorium induction in parasitic plants2017

    • Author(s)
      Songkui Cui, Syogo Wada, Yuki Tobimatsu, Yuri Takeda, Toshiyuki Takano, Toshiaki Umezawa, Ken Shirasu and Satoko Yoshida
    • Organizer
      日本植物生理学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 大腸菌進化実験による進化的制約の解析2017

    • Author(s)
      古澤力, 前田智也, 堀之内貴明
    • Organizer
      日本進化学会第19回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] HLAおよびKIR 遺伝子のシークエンシング2017

    • Author(s)
      細道一善
    • Organizer
      日本人類遺伝学会 第62回大会 シンポジウム18
    • Related Report
      2017 Annual Research Report
  • [Presentation] 古代ゲノム解析から推定される北アジアの人類集団史2017

    • Author(s)
      佐藤丈寛、安達登、木村亮介、米田穣、太田博樹、田嶋敦、豊田敦、松前ひろみ、小金渕佳江、清水健太郎、埴原恒彦、ウェーバー・アンジェイ、加藤博文、石田肇
    • Organizer
      日本人類遺伝学会第62回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 線虫の温度馴化に関わる自然多型遺伝子のマッピングとカリウムチャネルKQTの解析2017

    • Author(s)
      岡畑美咲、太田茜、水口洋平、豊田敦、久原篤
    • Organizer
      日本動物学会第88回年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Beta-oxidation of fatty acid metabolism through HADH is required for cold acclimation of C. elegans2017

    • Author(s)
      Shiori Sakai, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
    • Organizer
      日本比較生理生化学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 変異蓄積マウス系統は、放射線の遺伝影響を理解するための新たな方法論を提供する2017

    • Author(s)
      内村有邦、樋口真弓、水口洋平、福村龍太郎、西野穣、豊田敦、権藤洋一、八木健
    • Organizer
      日本放射線影響学会第60回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Genetic analysis of natural variants and identification of novel genes for cold acclimation2017

    • Author(s)
      Misaki Okahata, Iseki Toshihiro, Aguan D. Wei, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
    • Organizer
      分子生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Transcriptome analysis identify genes involved in cold acclimation of C. elegans2017

    • Author(s)
      Shiori Sakai, Mayu Fujita, Misaki Okanata, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
    • Organizer
      分子生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 無変態昆虫マダラシミの胚発生期では、幼若ホルモン関連遺伝子群がどのように発現しているのか.2017

    • Author(s)
      峯村俊儀・大出高弘・新美輝幸・塩月孝博・大門高明
    • Organizer
      平成30年度 蚕糸・昆虫機能利用学術講演会-日本蚕糸学会第88回大会-
    • Related Report
      2017 Annual Research Report
  • [Presentation] 魚が宇宙で過ごすとどうなるの?~宇宙滞在実験の結果より~2017

    • Author(s)
      佐藤文規、Choi Minyong、王梓、岩瀬海里、今村聖実、堀内映美、内田智子、谷垣文章、村谷匡史、小林純也、髙橋昭久、菅野純夫、鈴木穣、川上浩一、瀬原淳子
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] Allelic imbalance analysis based on haplotype-specific transcripts in F1 reciprocal cross in pepper.2017

    • Author(s)
      Andrea Ghelfi, Kenta Shirasawa, Hideki Hirakawa, Sachiko Isobe, Munetaka Hosokawa
    • Organizer
      第7回植物RNA研究ネットワークシンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 宇宙滞在が骨格筋に及ぼす影響-重力負荷減少だけではなさそう?2017

    • Author(s)
      佐藤文規、Choi Minyong、王梓, 岩瀬海里、今村聖実、堀内映美、内田智子、小林純也、髙橋昭久、菅野純夫、鈴木穣、川上浩一、瀬原淳子
    • Organizer
      日本宇宙生物科学会第31回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Nanopore sequencing for genotyping pathogens of tropical diseases2016

    • Author(s)
      Yutaka Suzuki
    • Organizer
      Joint International Tropical Medicine Meeting 2016
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2016-12-07
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] ゲノム情報の改正個人情報保護法上の位置づけに関する考察2016

    • Author(s)
      山本奈津子, 川嶋実苗, 藤田卓仙
    • Organizer
      第36回医療情報学連合大会(第17回日本医療情報学会学術大会)
    • Place of Presentation
      横浜
    • Year and Date
      2016-11-21
    • Related Report
      2016 Annual Research Report
  • [Presentation] 個人情報保護法改正の影響を考える(ワークショップのオーガナイザーとして。学会論文集は以下の著者で執筆)2016

    • Author(s)
      藤田卓仙, 荻島創一, 三井純, 鈴木穣, 上原哲太郎, 山本奈津子, 川嶋実苗, 鈴木正朝
    • Organizer
      第36回医療情報学連合大会(第17回日本医療情報学会学術大会)
    • Place of Presentation
      横浜
    • Year and Date
      2016-11-21
    • Related Report
      2016 Annual Research Report
  • [Presentation] EUデータ保護の動向(パネリストとして話題提供)2016

    • Author(s)
      山本奈津子
    • Organizer
      第5回生命医薬情報学連合大会
    • Place of Presentation
      東京
    • Year and Date
      2016-09-29
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Genomic data sharing in East Asia-Current status in Japan-2016

    • Author(s)
      Kazuto Kato
    • Organizer
      12th ICGC meeting
    • Place of Presentation
      Boston, USA
    • Year and Date
      2016-09-20
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Algorithms on Marginal Distributions of RNA Secondary Structures,2016

    • Author(s)
      Kiyoshi Asai
    • Organizer
      ALGO2016
    • Place of Presentation
      Aarhus University, Denmark
    • Year and Date
      2016-08-23
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Rtools : a web server for various secondary structural analyses on single RNA sequences,2016

    • Author(s)
      Michiaki Hamada, Yukiteru Ono, Hisanori Kiryu, Kengo Sato, Yuki Kato, Tsukasa Fukunaga, Ryota Mori, Kiyoshi Asai,
    • Organizer
      RNA2016
    • Place of Presentation
      京都
    • Year and Date
      2016-06-29
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] シングルセル解析~トランスクリプトームから多層オミクス解析へ2016

    • Author(s)
      鈴木穣
    • Organizer
      アジレントゲノミクスフォーラム
    • Place of Presentation
      東京
    • Year and Date
      2016-06-10
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Genomic Medicine in Japan : Recent Changes in the Government Policy, and New Ethical and Legal Challenges2016

    • Author(s)
      Kazuto Kato.
    • Organizer
      Precision Medicine : Legal and Ethical Challenges
    • Place of Presentation
      香港
    • Year and Date
      2016-04-08
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Revisions of Japanese Personal Data Protection Laws and Challenges in Promoting Biomedical Research Using Human Genetic/Genomic Data2016

    • Author(s)
      Natsuko Yamamoto
    • Organizer
      The 13th International Congress of Human Genetics (ICGC2016)
    • Place of Presentation
      京都
    • Year and Date
      2016-04-06
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ELSI practices and regulations for collaboration and public participation in personal genome research.2016

    • Author(s)
      Kazuto Kato.
    • Organizer
      The 13th International Congress of Human Genetics (ICGC2016)
    • Place of Presentation
      京都
    • Year and Date
      2016-04-05
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Book] 実験医学2018

    • Author(s)
      山岸潤也, Lucky Runtuwene, 林田京子, 鈴木 穣
    • Publisher
      羊土社
    • Related Report
      2017 Annual Research Report
  • [Book] 実験医学2018

    • Author(s)
      坂本祥駿, 勝俣恵理, 関真秀, 鈴木穣
    • Publisher
      羊土社
    • Related Report
      2017 Annual Research Report
  • [Book] Animal Models for the Study of Human Disease, Second Edition2017

    • Author(s)
      Yoichi Gondo, Shigeru Makino, Ryutaro Fukumura
    • Pages
      727-752
    • Total Pages
      1177
    • Publisher
      Academic Press
    • Related Report
      2017 Annual Research Report
  • [Book] Avian Reproduction2017

    • Author(s)
      Asato Kuroiwa
    • Pages
      13-13
    • Total Pages
      214
    • Publisher
      Springer
    • Related Report
      2017 Annual Research Report
  • [Book] Deversity and Evolution of Butterfly Wing Patterns2017

    • Author(s)
      Fujiwara, H.
    • Pages
      189-201
    • Total Pages
      320
    • Publisher
      Springer Open
    • Related Report
      2017 Annual Research Report
  • [Book] Promoter Associated RNA2017

    • Author(s)
      Nobuhiko Hamazaki, Kinichi Nakashima, Takuya Imamura
    • Pages
      12-12
    • Total Pages
      283
    • Publisher
      Springer Protocols
    • Related Report
      2017 Annual Research Report
  • [Book] Zygotic Genome Activation2017

    • Author(s)
      Nobuhiko Hamazaki, Kinichi Nakashima, Katsuhiko Hayashi, Takuya Imamura
    • Pages
      22-22
    • Total Pages
      271
    • Publisher
      Springer Protocols
    • Related Report
      2017 Annual Research Report
  • [Book] 化学療法の領域 次世代シーケンサが可能にした感染学の新しい展開2017

    • Author(s)
      林哲也
    • Total Pages
      216
    • Publisher
      医薬ジャーナル社
    • Related Report
      2017 Annual Research Report
  • [Book] 化学療法の領域 次世代シーケンサが可能にした感染学の新しい展開2017

    • Author(s)
      後藤恭宏
    • Pages
      10-10
    • Total Pages
      216
    • Publisher
      医薬ジャーナル社
    • Related Report
      2017 Annual Research Report
  • [Book] 化学療法の領域 次世代シーケンサが可能にした感染学の新しい展開2017

    • Author(s)
      小椋義俊
    • Pages
      11-11
    • Total Pages
      216
    • Publisher
      医薬ジャーナル社
    • Related Report
      2017 Annual Research Report
  • [Book] チョウの斑紋多様性と進化一統合的アプローチ2017

    • Author(s)
      藤原晴彦
    • Pages
      306-323
    • Total Pages
      375
    • Publisher
      海游舎
    • Related Report
      2017 Annual Research Report
  • [Book] 遺伝子発現制御機構 クロマチン, 転写制御, エピジェネティクス2017

    • Author(s)
      黒柳秀人
    • Pages
      5-5
    • Total Pages
      264
    • Publisher
      東京化学同人
    • Related Report
      2017 Annual Research Report
  • [Book] 化学療法の領域 組成解析(真菌)2017

    • Author(s)
      高橋弘喜
    • Pages
      105-9
    • Publisher
      医薬ジャーナル社
    • Related Report
      2017 Annual Research Report
  • [Book] 最新遺伝医学研究と遺伝カウンセリング、遺伝子医学MOOK別冊2017

    • Author(s)
      森下真一
    • Publisher
      メディカルドゥ
    • Related Report
      2017 Annual Research Report
  • [Book] 細胞 臨時増刊号 日常化するシングルセル遺伝子発現解析2017

    • Author(s)
      鹿島幸恵, 鈴木絢子, 関真秀, 鈴木穣
    • Publisher
      北隆館/ニュー・サイエンス社
    • Related Report
      2017 Annual Research Report
  • [Book] 実験医学別冊 エピジェネティクス実験スタンダード2017

    • Author(s)
      鹿島幸恵, 鈴木絢子, 関 真秀, 鈴木 穣
    • Pages
      10-10
    • Total Pages
      395
    • Publisher
      羊土社
    • Related Report
      2017 Annual Research Report
  • [Book] 実験医学別冊シングルセル解析プロトコール2017

    • Author(s)
      菅野純夫/編
    • Total Pages
      345
    • Publisher
      羊土社
    • Related Report
      2017 Annual Research Report
  • [Book] 東京大学ゲノム医科学研究機構 監修 「ゲノム医科学 -医療ビッグデータの活用とゲノム医療の実践-」2017

    • Author(s)
      森下真一
    • Publisher
      南山堂
    • Related Report
      2017 Annual Research Report
  • [Book] 実験医学別冊NGSアプリケーションRNA-Seq実験ハンドブック2016

    • Author(s)
      鈴木穣 編
    • Total Pages
      282
    • Publisher
      羊土社
    • Related Report
      2016 Annual Research Report
  • [Book] 実験医学増刊 「RNA-Seq実験ハンドブック」2016

    • Author(s)
      森下真一
    • Pages
      236-241
    • Total Pages
      282
    • Publisher
      羊土社
    • Related Report
      2016 Annual Research Report
  • [Book] 遺伝子医学MOOK別冊「最新精神・神経遺伝医学研究と遺伝カウンセリング」2016

    • Author(s)
      森下真一
    • Pages
      51-60
    • Total Pages
      308
    • Publisher
      株式会メディカル ドゥ
    • Related Report
      2016 Annual Research Report
  • [Book] 実験医学別冊「メタゲノム解析実験ハンドブック」2016

    • Author(s)
      鈴木慶彦、森下真一
    • Pages
      149-155
    • Total Pages
      231
    • Publisher
      羊土社
    • Related Report
      2016 Annual Research Report
  • [Remarks] 領域ホームページ

    • URL
      https://www.genome-sci.jp/
    • Related Report
      2017 Annual Research Report
  • [Remarks] minialign

    • URL
      https://github.com/ocxtal/minialign
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
  • [Remarks] libgaba

    • URL
      https://github.com/ocxtal/libgaba
    • Related Report
      2017 Annual Research Report
  • [Remarks] SonicParanoid

    • URL
      http://iwasakilab.bs.s.u-tokyo.ac.jp/sonicparanoid/
    • Related Report
      2017 Annual Research Report
  • [Remarks] DEclust

    • URL
      http://www.dna.bio.keio.ac.jp/software/DEclust/
    • Related Report
      2017 Annual Research Report
  • [Remarks] COSMOS

    • URL
      http://seselab.org/cosmos/
    • Related Report
      2017 Annual Research Report
  • [Remarks] DFAST

    • URL
      https://dfast.nig.ac.jp/
    • Related Report
      2017 Annual Research Report
  • [Remarks]

    • URL
      https://github.com/nigyta/dfast_core
    • Related Report
      2017 Annual Research Report
  • [Remarks] Sprai

    • URL
      http://zombie.cb.k.u-tokyo.ac.jp/sprai/
    • Related Report
      2017 Annual Research Report
  • [Remarks] L-MiGAP

    • URL
      https://www.migap.org/
    • Related Report
      2017 Annual Research Report
  • [Remarks] VITCOMIC2

    • URL
      http://vitcomic.org/
    • Related Report
      2017 Annual Research Report
  • [Remarks] Functree2.0

    • URL
      https://bioviz.tokyo/functree/
    • Related Report
      2017 Annual Research Report
  • [Remarks] MarpolBase

    • URL
      http://marchantia.info/
    • Related Report
      2017 Annual Research Report
  • [Remarks] LncRRIdb

    • URL
      http://rtools.cbrc.jp/LncRRIdb/
    • Related Report
      2017 Annual Research Report
  • [Remarks] DBTSS

    • URL
      https://dbtss.hgc.jp/
    • Related Report
      2017 Annual Research Report
  • [Remarks] DBKERO

    • URL
      http://kero.hgc.jp/
    • Related Report
      2017 Annual Research Report
  • [Remarks] AgIn

    • URL
      https://github.com/hacone/AgIn
    • Related Report
      2017 Annual Research Report
  • [Remarks] EAGLE

    • URL
      https://github.com/tony-kuo/eagle
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
  • [Remarks] Survival LAMP

    • URL
      https://rtrelator.github.io/SurvivalLAMP/
    • Related Report
      2017 Annual Research Report
  • [Remarks]

    • URL
      http://bioviz.tokyo/functree2
    • Related Report
      2017 Annual Research Report
  • [Remarks] LAST-TRAIN

    • URL
      http://last.cbrc.jp/
    • Related Report
      2016 Annual Research Report
  • [Remarks] Rtools

    • URL
      http://rtools.cbrc.jp
    • Related Report
      2016 Annual Research Report
  • [Remarks] SHARAKU

    • URL
      http://www.dna.bio.keio.ac.jp/sharaku/
    • Related Report
      2016 Annual Research Report
  • [Remarks] DFAST

    • URL
      https://dfast.nig.ac.jp
    • Related Report
      2016 Annual Research Report
  • [Remarks] DNApod

    • URL
      http://tga.nig.ac.jp/dnapod/
    • Related Report
      2016 Annual Research Report
  • [Remarks] libgaga

    • URL
      https://github.com/ocxtal/libgaba
    • Related Report
      2016 Annual Research Report
  • [Remarks] taw(Tiny Amazon Wrapper)

    • URL
      https://github.com/mkasa/taw/
    • Related Report
      2016 Annual Research Report
  • [Remarks] Mudi

    • URL
      http://naoii.nig.ac.jp/mudi_top.html
    • Related Report
      2016 Annual Research Report
  • [Remarks] DDBJ pipeline

    • URL
      https://p.ddbj.nig.ac.jp/
    • Related Report
      2016 Annual Research Report
  • [Remarks] Local Package Manager

    • URL
      https://lpm.bio/
    • Related Report
      2016 Annual Research Report
  • [Remarks] DBTSS

    • URL
      http://dbtss.hgc.jp/
    • Related Report
      2016 Annual Research Report
  • [Remarks] 高度情報解析支援活動のために開発運用中のツールやデータベース等。

    • Related Report
      2016 Annual Research Report
  • [Remarks] 配列群から、自動的に最適なアラインメントパラメータを学習する機能をLASTに追加。 RNA配列から2次構造予測、塩基対確率を含む周辺確率などを視覚的に理解しやすい形で提供。 トランスクリプトームデータからmiRNAなどの機能性非コードRNAをゲノムワイドに解析。 アセンブル済配列投入でINSDCへの登録が容易なアノテーションリストを自動生成する微生物ゲノムアノテーション・公開プラットフォーム DNA多形データベース。以下のDDBJパイプラインのワークフローとして公開・提供。 変異の確度を見積もり、確度の高さをスコア付けするプログラム。 Oxford Nanopore等のロングリード向け高速アラインメントツール。 ロングリード向け)高速なアラインメント計算ライブラリ。 Amazonのクラウト計算機利用を簡単にするツール。 WGSによる変異点同定支援ツール 遺伝研スパコンのグラフィックフロントエンドとしてのNGSの解析支援パイプライン 各種ゲノム解析ソフトウェアのインストール手順データベース 完全長cDNA配列と真核生物の正確な転写開始点およびプロモーター領域のデータベース

    • Related Report
      2016 Annual Research Report
  • [Remarks] プラットフォームHPのURL

    • URL
      http://www.genome-sci.jp/
  • [Patent(Industrial Property Rights)] 早期大腸癌の検出方法2017

    • Inventor(s)
      山田拓司, 福田真嗣, 谷内田真一
    • Filing Date
      2017
    • Application Year
      2017
    • Related Report
      2017 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 次世代シーケンサーを用いた迅速な遺伝子検索方法2017

    • Inventor(s)
      中岡博史、井ノ上逸朗
    • Industrial Property Rights Holder
      大学共同利用機関法人 情報・システム研究機構
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2017-006314
    • Filing Date
      2017-01-17
    • Application Year
      2017
    • Related Report
      2016 Annual Research Report
  • [Patent(Industrial Property Rights)] 情報処理システム、情報処理方法、及びプログラム2017

    • Inventor(s)
      黒川顕、東光一、森宙史
    • Industrial Property Rights Holder
      大学共同利用機関法人情報・システム研究機構
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2017-012340
    • Filing Date
      2017-01-26
    • Application Year
      2017
    • Related Report
      2016 Annual Research Report
  • [Funded Workshop] 国際シンポジウム"The Start of New Genomics"2017

    • Place of Presentation
      東京大学伊藤謝恩ホール(東京)
    • Year and Date
      2017-01-10
    • Related Report
      2016 Annual Research Report

URL: 

Published: 2016-12-27   Modified: 2019-03-20  

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