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Advancing Quantum Chemistry for Accurate and Rapid Computation of Broad Range of Chemical Systems

Research Project

Project/Area Number 16H07074
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Physical chemistry
Research InstitutionNagasaki University

Principal Investigator

CHAN Bun  長崎大学, 工学研究科, 助教 (90786162)

Project Period (FY) 2016-08-26 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
KeywordsComputational chemistry / DFT / Physical chemistry / Thermodynamics / Protein degradation / Metal organic framework / Composite procedure / Chemical mechanism / Biophysical chemistry / Nanomaterials / Catalysis / Quantum chemistry / Wavefunction method / Carbon nanochemistry / 化学物理 / ナノチューブ.フラーレン
Outline of Final Research Achievements

In this project, we have devised a range of computational quantum chemistry methodologies for the calculation of properties of generic molecular species as well as materials systems. These include highly accurate wavefunction procedures as well as computationally efficient density functional theory (DFT) methods. Specifically, two composite protocols, "WG" and "WGh", and two DFTs, "HSEB" and "reHISS", have been formulated. They represent a complete set of methods suitable for all quantum chemistry investigations.
We have used these methods to tackle chemical problems in biology (e.g., oxidation of DNAs and proteins) and materials systems (e.g., electrical and photochemical properties of metal-organic frameworks).
In total, this project has directly and indirectly lead to about 20 internationally peer-reviewed publications. The results have also been presented in multiple international conferences.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • Research Products

    (20 results)

All 2018 2017 2016

All Journal Article (15 results) (of which Int'l Joint Research: 15 results,  Peer Reviewed: 15 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (5 results) (of which Int'l Joint Research: 4 results,  Invited: 3 results)

  • [Journal Article] Spectroscopic, Electronic and Computational Properties of a Mixed Tetrachalcogenafulvalene and its Charge Transfer Complex2018

    • Author(s)
      Walwyn, R. J.; Chan, B.; Usov, P. M.; Solomon, M. B.; Duyker, S. G.; Koo, J. Y.; Kawano, M.; Turner, P.; Kepert, C. J.; D'Alessandro, D. M.
    • Journal Title

      J. Mater. Chem. C

      Volume: 6 Issue: 5 Pages: 1092-1104

    • DOI

      10.1039/c7tc03853d

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Effect of Hydrogen Bonding and Partial Deprotonation on the Oxidation of Peptides2018

    • Author(s)
      Chan, B.; Easton, C. J.; Radom, L.
    • Journal Title

      J. Phys. Chem. A

      Volume: 122 Issue: 6 Pages: 1741-1746

    • DOI

      10.1021/acs.jpca.7b11797

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Hydrogen-Adduction to Open-Shell Graphene Fragments: Spectroscopy, Thermochemistry and Astrochemistry.2017

    • Author(s)
      O'Connor, G. D.; Chan, B.; Sanelli, J. A.; Cergol, K. M.; Dryza, V.; Payne, R. J.; Bieske, E. J.; Radom, L.; Schmidt, T. W.
    • Journal Title

      Chem. Sci.

      Volume: 8 Issue: 2 Pages: 1186-1194

    • DOI

      10.1039/c6sc03787a

    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Accelerated Protein Synthesis via One-Pot Ligation-Deselenization Chemistry2017

    • Author(s)
      Mitchell, N. J.; Sayers, J.; Kulkarni, S. S.; Clayton, D.; Goldys, A. M.; Ripoll-Rozada, J.; Pereira, P. J. B.; Chan, B.; Radom, L.; Payne, R. J.
    • Journal Title

      CHEM

      Volume: 2 Issue: 5 Pages: 703-715

    • DOI

      10.1016/j.chempr.2017.04.003

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Unravelling Some of the Key Transformations in the Hydrothermal Liquefaction of Lignin2017

    • Author(s)
      Lui, M. Y.; Chan, B.; Yuen, A. K. L.; Masters, A. F.; Montoya, A.; Maschmeyer, T.
    • Journal Title

      ChemSusChem

      Volume: 10 Pages: 2140-2144

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] How to Computationally Calculate Thermochemical Properties Objectively, Accurately, and as Economically as Possible2017

    • Author(s)
      Chan, B.
    • Journal Title

      Pure Appl. Chem.

      Volume: 89 Issue: 6 Pages: 699-713

    • DOI

      10.1515/pac-2016-1116

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Unification of the W1X and G4(MP2)-6X Composite Protocols2017

    • Author(s)
      Chan, B.
    • Journal Title

      J. Chem. Theory Comput.

      Volume: 13 Issue: 6 Pages: 2642-2649

    • DOI

      10.1021/acs.jctc.7b00219

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Watson-Crick Base Pair Radical Cation as a Model for Oxidative Damage in DNA2017

    • Author(s)
      Feketeova, L.; Chan, B.; Khairallah, G. N.; Steinmetz, V.; Maitre, P.; Radom, L.; O’Hair, R. A.
    • Journal Title

      J. Phys. Chem. Lett.

      Volume: 8 Issue: 13 Pages: 3159-3165

    • DOI

      10.1021/acs.jpclett.7b01251

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Impact of Hydrogen Bonding on the Susceptibility of Peptides to Oxidation2017

    • Author(s)
      Chan, B.; Moran, D.; Easton, C. J.; Radom, L.
    • Journal Title

      Chem. Asian J.

      Volume: 12 Issue: 13 Pages: 1485-1489

    • DOI

      10.1002/asia.201700492

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Correlation functional in screened-exchange density functional theory procedures2017

    • Author(s)
      Chan Bun、Kawashima Yukio、Hirao Kimihiko
    • Journal Title

      Journal of Computational Chemistry

      Volume: 38 Issue: 27 Pages: 2307-2315

    • DOI

      10.1002/jcc.24882

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Use of Low-Cost Quantum Chemistry Procedures for Geometry Optimization and Vibrational Frequency Calculations: Determination of Frequency Scale Factors and Application to Reactions of Large Systems2017

    • Author(s)
      Chan, B.
    • Journal Title

      J. Chem. Theory Comput.

      Volume: 13 Issue: 12 Pages: 6052-6060

    • DOI

      10.1021/acs.jctc.7b00721

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Reactivity of Disulfide Bonds is Markedly Affected by Structure and Environment: Implications for Protein Modification and Stability.2016

    • Author(s)
      Karimi, M.; Ignasiak, M. T.; Chan, B.; Croft, A. K.; Radom, L.; Schiesser, C. H.; Pattison, D. I.; Davies, M. J.
    • Journal Title

      Sci. Rep.

      Volume: 6 Issue: 1

    • DOI

      10.1038/srep38572

    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Preparation of an Ion with the Highest Calculated Proton Affinity: Ortho-Diethynylbenzene Dianion.2016

    • Author(s)
      Poad, B. L. J.; Reed, N. D.; Hansen, C. S.; Trevitt, A. J.; Blanksby, S. J.; Mackay, E. G.; Sherburn, M. S.; Chan, B. Radom, L.
    • Journal Title

      Chem. Sci.

      Volume: 7 Issue: 9 Pages: 6245-6250

    • DOI

      10.1039/c6sc01726f

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Role of Hydrogen Bonding on the Reactivity of Thiyl Radicals: A Mass Spectrometric and Computational Study Using the Distonic Radical Ion Approach.2016

    • Author(s)
      Osburn, S.; Chan, B.; Ryzhov, V.; Radom, L.; O’Hair, R. A. J.
    • Journal Title

      J. Phys. Chem. A

      Volume: 120 Issue: 41 Pages: 8184-8189

    • DOI

      10.1021/acs.jpca.6b08544

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Restricted-Open-Shell G4(MP2)-Type Procedures.2016

    • Author(s)
      Chan, B.; Karton, A.; Raghavachari, K.; Radom, L.
    • Journal Title

      J. Phys. Chem. A

      Volume: 120 Issue: 46 Pages: 9299-9304

    • DOI

      10.1021/acs.jpca.6b09361

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] Double hybrid DFTs and their applications to fullerene chemistry2017

    • Author(s)
      Chan, B.
    • Organizer
      Gamess 7557 Theory Symposium
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Efficient Computational Methods for the Accurate Calculation of Thermochemical Properties2017

    • Author(s)
      Chan, B.
    • Organizer
      20th Annual Meeting of Theoretical Chemistry Society
    • Related Report
      2017 Annual Research Report
  • [Presentation] From G4(MP2)-6X to W3X-L: A Range of Efficient and Accurate Thermochemical Composite Protocols2017

    • Author(s)
      Chan, B.; Radom, L.
    • Organizer
      Eleventh Triennial Congress of the World Association of Theoretical and Computational Chemists
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] From G4(MP2)-6X to W3X-L: A Range of Efficient and Accurate Thermochemical Composite Protocols2017

    • Author(s)
      Chan, B.
    • Organizer
      The 8th Asian Pacific Conference of Theoretical and Computational Chemistry
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Double-hybrid density functional theory: Development and application to fullerene chemistry2016

    • Author(s)
      Chan, B.
    • Organizer
      Australian Symposium on Computational Chemistry
    • Place of Presentation
      University of Western Australia, Perth, Australia
    • Year and Date
      2016-12-01
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited

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Published: 2016-09-02   Modified: 2019-03-29  

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