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Acetylation-dependent chromatin dynamics in DNA damage response

Research Project

Project/Area Number 16K00544
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Risk sciences of radiation and chemicals
Research InstitutionKyoto University

Principal Investigator

IKURA MASAE  京都大学, 生命科学研究科, 研究員 (40535275)

Research Collaborator MATSUDA tomonari  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2018: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
KeywordsDNA損傷応答 / アセチル化 / TRRAP / ATM / TIP60
Outline of Final Research Achievements

We have already shown that TIP60 histone acetyltransferase complex regulates H2AX exchange via its acetylation at DNA damage sites. However, it remains unclear how this acetylation is maintained and facilitated at DNA damage sites. In this study, focusing on the component of TIP60 complex, TRRAP, we found that TRRAP recruits TIP60 to DNA damage sites and regulates acetylation-dependent H2AX exchange. Since it is known that TRRAP is a member of PI3 kinase family but has no kinase activity, it is predicted that TRRAP competes against ATM in a DNA damage response.However, our study demonstrated that TRRAP and ATM do not compete each other, but have distinct roles in DNA damage response under the circumstances of different radiation dose rate.

Academic Significance and Societal Importance of the Research Achievements

今回の研究で、ヒストンH2AXのアセチル化の放射線ストレス応答における役割の一端が、明らかになった。アセチル化の責任酵素であるTIP60複合体の構成因子であるTRRAPに着目したことによって、H2AXのアセチル化とリン酸化の関係は、異なる線量率によってそれぞれその役割が異なることが見えてきた。これらの知見は、、福島原発事故の生体に対する放射線影響の分子レベルでの理解に貢献できると考えられる。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (22 results)

All 2018 2017 2016

All Journal Article (4 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 4 results,  Open Access: 4 results) Presentation (18 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] Cancer-associated mutations of histones H2B, H3.1 and H2A.Z.1 affect the structure and stability of the nucleosome2018

    • Author(s)
      Arimura Yasuhiro、Ikura Masae、Fujita Risa、Noda Mamiko、Kobayashi Wataru、Horikoshi Naoki、Sun Jiying、Shi Lin、Kusakabe Masayuki、Harata Masahiko、Ohkawa Yasuyuki、Tashiro Satoshi、Kimura Hiroshi、Ikura Tsuyoshi、Kurumizaka Hitoshi
    • Journal Title

      Nucleic Acids Research

      Volume: - Pages: 10007-10018

    • DOI

      10.1093/nar/gky661

    • NAID

      120006545208

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Distinct roles of ATM and ATR in the regulation of ARP8 phosphorylation to prevent chromosome translocations2018

    • Author(s)
      Sun, J., Shi, L., Kinomura, A., Fukuto, A., Horikoshi, Y., Oma, Y., Harata, M., Ikura, M., Ikura, T., Kanaar, R., Tashiro, S
    • Journal Title

      elife

      Volume: 7

    • DOI

      10.7554/elife.32222

    • NAID

      120006539566

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] SUMO modification system facilitates the exchange of histone variant H2A.Z-2 at DNA damage sites2017

    • Author(s)
      Fukuto Atsuhiko、Ikura Masae、Ikura Tsuyoshi、Sun Jiying、Horikoshi Yasunori、Shima Hiroki、Igarashi Kazuhiko、Kusakabe Masayuki、Harata Masahiko、Horikoshi Naoki、Kurumizaka Hitoshi、Kiuchi Yoshiaki、Tashiro Satoshi
    • Journal Title

      Nucleus

      Volume: 9 Issue: 1 Pages: 87-94

    • DOI

      10.1080/19491034.2017.1395543

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The CDK-PLK1 axis targets the DNA damage checkpoint sensor protein RAD9 to promote cell proliferation and tolerance to genotoxic stress2017

    • Author(s)
      Wakida Takeshi、Ikura Masae、Kuriya Kenji、Ito Shinji、Shiroiwa Yoshiharu、Habu Toshiyuki、Kawamoto Takuo、Okumura Katsuzumi、Ikura Tsuyoshi、Furuya Kanji
    • Journal Title

      eLife

      Volume: 6 Pages: 1-26

    • DOI

      10.7554/elife.29953

    • NAID

      120006370731

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] ゲノムストレス応答研究における知の創成2018

    • Author(s)
      井倉 毅 古谷 寛治 井倉 正枝
    • Organizer
      第41回日本分子生物学会年会ワークショップ
    • Related Report
      2018 Annual Research Report
  • [Presentation] ATM regulates ARP8 phosphorylation to prevent etoposide-induced chromosomal translocations2018

    • Author(s)
      孫 継英、時 林、木野村 愛子、福戸 敦彦、堀越 保則、尾間 由佳子、原田 昌彦、井倉 正枝、井倉 毅、Roland Kanaar、田代 聡
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] オートファジー機構によるがんシグナル経路の調節2018

    • Author(s)
      古谷 寛治 井倉 正枝 井倉 毅
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] ヒストンアセチル化を介した損傷クロマチンダイナミクス2018

    • Author(s)
      井倉 毅 古谷 寛治 井倉 正枝
    • Organizer
      日本放射線影響学会 第61回大会シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] Telomeric ssDNA-binding proteins of CST Complex are associated with Nucleotide Excision Repair2018

    • Author(s)
      Tomohiko Hara,Yusuke Shima,Yuzo Watanabe,Masae Ikura,Tsuyoshi Ikura,and Fuyuki ishikawa
    • Organizer
      16th International Student Seminar,Kyoto University
    • Related Report
      2017 Research-status Report
  • [Presentation] ヒストンH2AX の交換反応を介した損傷クロマチンダイナミクス2017

    • Author(s)
      井倉 毅、古谷寛治、田代聡、井倉 正枝
    • Organizer
      新学術領域「クロマチン動構造」第5回班会議
    • Related Report
      2017 Research-status Report
  • [Presentation] ゲノム損傷ストレスにおけるTIP60ヒストンアセチル化酵素とポリADP-リボシル化酵素PARP-1の連携機構の役割2017

    • Author(s)
      井倉正枝、福戸敦彦、古谷寛治,井倉毅
    • Organizer
      日本放射線影響学会、第60回大会
    • Related Report
      2017 Research-status Report
  • [Presentation] ゲノム損傷ストレス下での細胞増殖を保障するCDK-PLK1経路によるDNA損傷シグナリングの調節2017

    • Author(s)
      古谷寛治,井倉正枝,井倉毅
    • Organizer
      日本放射線影響学会、第60回大会
    • Related Report
      2017 Research-status Report
  • [Presentation] CDK-PLK1 axis targets DNA checkpoint sensor protein RAD9,promoting tolerance to genotoxic stress and cell proliferation.2017

    • Author(s)
      Kanji FURUYA,Masae IKURA,Tsuyoshi IKURA
    • Organizer
      33rd International Symposium of Radiation Biology Center,Kyoto University,"Cutting Edge of Radiation and Cancer Biology"
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] CST complex,telomeric ssDNA-binding protein,is associated with Nucleotide Excision Repair in whole genome2017

    • Author(s)
      Tomohiko HARA,Yusuke SHIMA,Yuzo WATANABE,Masae IKURA,Tsuyoshi IKURA,Fuyuki ISHIKAWA
    • Organizer
      33rd International Symposium of Radiation Biology Center,Kyoto University,"Cutting Edge of Radiation and Cancer Biology"
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] ゲノムストレス応答における機能的蛋白質複合体フラクチュエーション2017

    • Author(s)
      井倉 毅、白木 琢磨、古谷 寛治、井倉 正枝
    • Organizer
      生命科学系学会合同年次大会 ConBio 2017
    • Related Report
      2017 Research-status Report
  • [Presentation] ゲノム損傷ストレス下での細胞増殖を保障する CDK-PLK1経路による DNA損傷シグナリングの調節2017

    • Author(s)
      古谷 寛治、井倉 正枝、井倉 毅
    • Organizer
      生命科学系学会合同年次大会 ConBio 2017
    • Related Report
      2017 Research-status Report
  • [Presentation] ゲノム損傷ストレス下での細胞増殖を保障するCDK-PLK1経路によるDNA損傷シグナリングの調節2017

    • Author(s)
      古谷寛治,井倉正枝、井倉毅
    • Organizer
      第35回染色体ワークショップ・第16回核ダイナミクス研究会合同開催
    • Related Report
      2017 Research-status Report
  • [Presentation] ゲノムストレス応答の多様性を数理的アプローチで理解する2016

    • Author(s)
      井倉 毅
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] リンカーヒストンH1を含むクロマチンでの相同組換え反応2016

    • Author(s)
      町田晋一
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] DNAチェックポイント因子Rad9の機能制御を担うCdk-Plk1依存的機構の意義2016

    • Author(s)
      郡司未佳
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] がん細胞で高頻度におこるヒストンH2B点変異体はヌクレオソーム構造および細胞増殖に影響を与える2016

    • Author(s)
      野田真美子
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] DNA損傷応答におけるヒストンH2AX複合体モジュールのダイナミクス2016

    • Author(s)
      井倉  毅
    • Organizer
      第89回日本生化学会大会
    • Place of Presentation
      仙台市
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2020-03-30  

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