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Estimation of patient-specific muscle fiber arrangement using clinical CT and statistical modeling of the fiber arrangement

Research Project

Project/Area Number 16K01411
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Medical systems
Research InstitutionNara Institute of Science and Technology

Principal Investigator

OTAKE Yoshito  奈良先端科学技術大学院大学, 先端科学技術研究科, 准教授 (80349563)

Co-Investigator(Kenkyū-buntansha) 高尾 正樹  大阪大学, 医学系研究科, 講師 (30528253)
横田 太  奈良先端科学技術大学院大学, 先端科学技術研究科, 助教 (60759900)
SOUFI MAZEN  奈良先端科学技術大学院大学, 先端科学技術研究科, 助教 (80823525)
菅野 伸彦  大阪大学, 医学系研究科, 寄附講座教授 (70273620)
Research Collaborator SATO Yoshinobu  
TAKAGI Shu  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2018: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2017: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywords生体シミュレーション / 筋骨格力学解析 / 筋線維走行モデリング / バイオメカニクス解析 / 筋線維モデリング / 医用画像解析 / CT画像 / 筋骨格セグメンテーション / 線維走行統計モデル / 医用システム / コンピュータ外科
Outline of Final Research Achievements

We aimed at in-vivo measurement of muscle fiber arrangement in skeletal muscles from patient-specific CT. Conventionally, the in-vivo muscle fiber analysis is limited to diffusion tensor MRI and ultrasound images. This study explored a third method using CT in order to allow much larger field-of-view and apply to broader clinical applications. We created a high-fidelity 3D muscle fiber template from cryo-section images derived from cadavers. Then, we developed a robust registration algorithm that non-rigidly register the template to CT images to estimate the patient-specific muscle fiber arrangement. The estimated results were quantitatively evaluated by CT image of the cadaver. The developed algorithm was applied to a large-scale database of clinical CT and variation in the muscle fiber arrangements was analyzed. The muscle fiber arrangements can be applied in biomechanical simulation in orthopedic surgery, rehabilitation medicine, as well as ergonomic design in industry, and so on.

Academic Significance and Societal Importance of the Research Achievements

本研究は臨床用CTから、従来の解析対象より一段階微細な構造である「筋線維束」の抽出に挑戦した。遺体から作製した信頼性の高い三次元線維走行モデルを事前知識として用いる事で、ノイズの多いCT画像から安定な線維走行解析を可能とした。ここで得られた被験者個別の筋線維走行を反映した次世代骨格筋モデルによる力学シミュレーションは、整形外科や歯科、スポーツ医学におけるバイオメカニクス解析へ応用可能である。また、人間工学を考慮したデザインや自動車の衝突による人体へのダメージの解析など、様々な産業分野でも、生体シミュレーションは中核をなす基礎科学でありこれらの分野への波及効果も期待できる。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (34 results)

All 2019 2018 2017 2016 Other

All Int'l Joint Research (3 results) Journal Article (11 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 10 results,  Open Access: 4 results,  Acknowledgement Compliant: 1 results) Presentation (20 results) (of which Int'l Joint Research: 13 results)

  • [Int'l Joint Research] Johns Hopkins University(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Ajou University School of Medicine/Dongguk University(韓国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Johns Hopkins University(米国)

    • Related Report
      2016 Research-status Report
  • [Journal Article] Validation study of the CT-based cross-sectional evaluation of muscular atrophy and fatty degeneration around the pelvis and the femur2019

    • Author(s)
      Ogawa Takeshi、Takao Masaki、Otake Yoshito、Yokota Futoshi、Hamada Hidetoshi、Sakai Takashi、Sato Yoshinobu、Sugano Nobuhiko
    • Journal Title

      Journal of Orthopaedic Science

      Volume: - Issue: 1 Pages: 139-144

    • DOI

      10.1016/j.jos.2019.02.004

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A cross-sectional study on the age-related cortical and trabecular bone changes at the femoral head in elderly female hip fracture patients2019

    • Author(s)
      Whitmarsh Tristan、Otake Yoshito、Uemura Keisuke、Takao Masaki、Sugano Nobuhiko、Sato Yoshinobu
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 1-8

    • DOI

      10.1038/s41598-018-36299-y

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Recovery of 3D rib motion from dynamic chest radiography and CT data using local contrast normalization and articular motion model2019

    • Author(s)
      Yuta Hiasa, Yoshito Otake, Rie Tanaka, Shigeru Sanada, Yoshinobu, Sato. Recovery of 3D rib motion from dynamic chest radiography and CT data using local contrast normalization and articular motion model
    • Journal Title

      Medical Image Analysis

      Volume: 51 Pages: 144-156

    • DOI

      10.1016/j.media.2018.10.002

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Reproducibility of pelvic sagittal inclination while acquiring radiographs in supine and standing postures2019

    • Author(s)
      Keisuke Uemura, Masaki Takao, Yoshito Otake, Koki Koyama, Futoshi Yokota, Hidetoshi Hamada, Takashi Sakai, Yoshinobu Sato, Nobuhiko Sugano
    • Journal Title

      Journal of Orthopaedic Surgery

      Volume: 27(1) Issue: 1 Pages: 1-1

    • DOI

      10.1177/2309499019828515

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of forearm rotational motion using biplane fluoroscopic intensity-based 2D?3D matching2019

    • Author(s)
      Shingo Abe, Yoshito Otake, Yusuke Tennma, Yuta Hiasa, Kunihiro Oka, Hiroyuki Tanaka, Atsuo Shigi, Satoshi Miyamura, Yoshinobu Sato, Tsuyoshi Murase
    • Journal Title

      Journal of Biomechanics

      Volume: - Pages: 128-133

    • DOI

      10.1016/j.jbiomech.2019.04.017

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Automated muscle segmentation from CT images of the hip and thigh using a hierarchical multi-atlas method.2018

    • Author(s)
      Yokota F, Otake Y, Takao M, Ogawa T, Okada T, Sugano N, Sato Y.
    • Journal Title

      International journal of computer assisted radiology and surgery.

      Volume: :1-0. Issue: 7 Pages: 977-986

    • DOI

      10.1007/s11548-018-1758-y

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Can anatomic measurements of stem Anteversion angle be considered as the functional Anteversion angle?2018

    • Author(s)
      Keisuke Uemura, Masaki Takao, Yoshito Otake, Koki Koyama, Futoshi Yokota, Hidetoshi Hamada, Takashi Sakai, Yoshinobu Sato, Nobuhiko Sugano
    • Journal Title

      The Journal of arthroplasty

      Volume: 33(2) Issue: 2 Pages: 595-600

    • DOI

      10.1016/j.arth.2017.09.027

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The distribution of bone mineral density in the femoral heads of unstable intertrochanteric fractures2018

    • Author(s)
      Uemura Keisuke、Takao Masaki、Otake Yoshito、Hamada Hidetoshi、Sakai Takashi、Sato Yoshinobu、Sugano Nobuhiko
    • Journal Title

      Journal of Orthopaedic Surgery

      Volume: 26 Issue: 2 Pages: 1-7

    • DOI

      10.1177/2309499018778325

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Applications and future perspectives of deep learning in medical image analysis2018

    • Author(s)
      大竹義人, 日朝祐太, 高尾正樹, 菅野伸彦, 佐藤嘉伸
    • Journal Title

      Iryou kikigaku (The Japanese journal of medical instrumentation)

      Volume: 88 Issue: 4 Pages: 490-496

    • DOI

      10.4286/jjmi.88.490

    • NAID

      130007495722

    • ISSN
      1882-4978, 1884-054X
    • Related Report
      2018 Annual Research Report
  • [Journal Article] The Posterior Capsular Ligamentous Complex Contributes to Hip Joint Stability in Distraction2018

    • Author(s)
      Masaki Takao, Yoshito Otake, Norio Fukuda, Yoshinobu Sato, Mehran Armand, Nobuhiko Sugano
    • Journal Title

      The Journal of Arthroplasty

      Volume: 33(3) Issue: 3 Pages: 919-924

    • DOI

      10.1016/j.arth.2017.10.026

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Estimation of attachment regions of hip muscles in CT image using muscle attachment probabilistic atlas constructed from measurements in eight cadavers2017

    • Author(s)
      Fukuda N, Otake Y, Takao M, Yokota F, Ogawa T, Uemura K, Nakaya R, Tamura K, Grupp RB, Farvardin A, Armand M
    • Journal Title

      International Journal of Computer Assisted Radiology and Surgery

      Volume: - Issue: 5 Pages: 1-10

    • DOI

      10.1007/s11548-016-1519-8

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] Automated segmentation of hip and thigh muscles in metal artifact contaminated CT using CNN2019

    • Author(s)
      Mitsuki Sakamoto, Yuta Hiasa, Yoshito Otake, Masaki Takao, Yuki Suzuki, Nobuhiko Sugano, Yoshinobu Sato
    • Organizer
      International Forum on Medical Imaging in Asia 2019
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Multiscale and functional modeling of musculoskeletal system for diagnosis, surgical planning and prognostic assessment in orthopedic surgery2019

    • Author(s)
      Yoshito Otake, Yuta Hiasa, Masaki Takao, Norio Fukuda,Nobuhiko Sugano,Yoshinobu Sato
    • Organizer
      International Forum on Medical Imaging in Asia 2019
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 高精細連続切片画像を用いた 線維トラクトグラフィーによる 筋腱モデリング2019

    • Author(s)
      時末 尚悟, 大竹 義人, Mazen Soufi, 福田 紀生, 高尾 正樹, 菅野 伸彦, Beom Sun Chung, Jin Seo Park, 佐藤 嘉伸
    • Organizer
      電子情報通信学会・医用画像研究会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Registration-Based Patient-Specific Musculoskeletal Modeling Using High Fidelity Cadaveric Template Model2018

    • Author(s)
      Yoshito Otake, Masaki Takao, Norio Fukuda, Shu Takagi, Naoto Yamamura, Nobuhiko Sugano, Yoshinobu Sato
    • Organizer
      21th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cross-Modality Image Synthesis from Unpaired Data Using CycleGAN2018

    • Author(s)
      Yuta Hiasa, Yoshito Otake, Masaki Takao, Takumi Matsuoka, Kazuma Takashima, Aaron Carass, Jerry L Prince, Nobuhiko Sugano, Yoshinobu Sato
    • Organizer
      21th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) International Workshop on Simulation and Synthesis in Medical Imaging
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Open Visible Muscle Fibers: Database of Muscle Fiber Arrangements Computed from Visible Korean Dataset for Biomechanical Modeling and Simulations2018

    • Author(s)
      Mazen Soufi, Yoshito Otake, Norio Fukuda, Masaki Takao, Lauren J. O’Donnell Carl-Fredrik Westin, Beom Sung Chung, Jin Seo Park, Nobuhiko Sugano, Yoshinobu Sato
    • Organizer
      日本コンピュータ外科学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] CT画像からの筋骨格自動抽出 ~能動学習を用いた畳み込みニューラルネットワークに関する検討~2018

    • Author(s)
      日朝 祐太, 大竹 義人, 高尾 正樹, 菅野 伸彦, 佐藤 嘉伸
    • Organizer
      日本コンピュータ外科学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 立位MRI を用いた立位荷重下の股関節周囲筋の解析2018

    • Author(s)
      福田紀生, 高尾正樹, 栗田侑樹, 濱田英敏, 大竹義人, 菅野伸彦, 佐藤嘉伸
    • Organizer
      日本コンピュータ外科学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Automated Muscle Segmentation from CT Images of the Hip and Thigh using Hierarchical Multi-atlas Method -Validation using Large-scale Datasets-2017

    • Author(s)
      Futoshi Yokota, Otake Yoshito, Masaki Takao, Takeshi Ogawa, Nobuhiko Sugano, Sato Yoshinobu
    • Organizer
      The International Forum on Medical Imaging in Asia
    • Place of Presentation
      Tenbusu-kan (Nahashi, Okinawa)
    • Year and Date
      2017-01-19
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] CT画像を用いた股関節周辺骨格筋の線維走行解析2017

    • Author(s)
      宮本康平, 大竹義人, 横田太, 日朝祐太, Min Suk Chung, 高尾正樹, 菅野伸彦, 佐藤嘉伸
    • Organizer
      電子情報通信学会、医用画像研究会
    • Place of Presentation
      てんぶす館(沖縄県那覇市)
    • Year and Date
      2017-01-18
    • Related Report
      2016 Research-status Report
  • [Presentation] Patient-specific skeletal muscle fiber modeling from structure tensor field of clinical CT images2017

    • Author(s)
      Yoshito Otake, Futoshi Yokota, Norio Fukuda, Masaki Takao, Shu Takagi, Naoto Yamamura, Lauren J. O'Donnell, Carl-Fredrik Westin, Nobuhiko Sugano, Yoshinobu Sato
    • Organizer
      20th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Reconstruction of 3D muscle fiber structure using high resolution cryosectioned volume2017

    • Author(s)
      Yoshito Otake, Kohei Miyamoto, Axel Olliver, Futoshi Yokota, Norio Fukuda, Lauren J. O’Donnell, Carl-Fredric Westin, Masaki Takao, Nobuhiko Sugano, Beom Sun Chung, Jin Seo Park, Yoshinobu Sato
    • Organizer
      20th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Reconstruction of patient-specific fiber arrangement of skeletal muscles from clinical CT2017

    • Author(s)
      Yoshito Otake, Futoshi Yokota, Norio Fukuda, Masaki Takao, Shu Takagi, Naoto Yamamura, Lauren J. O’Donnell, Carl-Fredrik Westin, Min Suk Chung, Nobuhiko Sugano, Yoshinobu Sato
    • Organizer
      Computer Assisted Radiology and Surgery
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 畳み込みニューラルネットワークを用いたCT画像からの股関節および大腿部の筋骨格領域自動抽出2017

    • Author(s)
      日朝祐太, 大竹義人, 横田太, 高尾正樹, 小川剛, 菅野伸彦, 佐藤嘉伸
    • Organizer
      電子情報通信学会、医用画像研究会
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 筋機能解析のための機械式リニアガイドを用いた超音波時系列3次元画像再構成 -slice-to-volume非剛体位置合わせの検証-2017

    • Author(s)
      佐野徳美, 福田紀生, 大竹義人, 阿部真悟, 近田彰治, 佐藤嘉伸
    • Organizer
      電子情報通信学会、医用画像研究会
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 多階層マルチアトラス法を用いた股関節・大腿部CT画像からの筋肉領域自動抽出~マニュアルトレース対象症例の効果的選択~2017

    • Author(s)
      横田太, 大竹義人, 高尾正樹, 小川剛, 菅野伸彦, 佐藤嘉伸
    • Organizer
      第35回日本医用画像工学会大会
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 8体のCadaverによる実計測を用いた股関節筋付着部位の統計的予測2016

    • Author(s)
      福田紀生, 大竹義人, 高尾正樹, 横田太, 小川剛, 上村圭亮, 中矢亮太, 田村和則, Robert Grupp, Amirhossein Farvardin, Mehran Armand, 菅野伸彦, 佐藤嘉伸
    • Organizer
      第35回日本医用画像工学会大会
    • Place of Presentation
      千葉大学(千葉県千葉市)
    • Year and Date
      2016-07-21
    • Related Report
      2016 Research-status Report
  • [Presentation] 多階層マルチアトラス法を用いた股関節・大腿部CT画像からの筋肉領域自動抽出~マニュアルトレース対象症例の効果的選択~2016

    • Author(s)
      横田太, 大竹義人, 高尾正樹, 小川剛, 菅野伸彦, 佐藤嘉伸
    • Organizer
      第35回日本医用画像工学会大会
    • Place of Presentation
      千葉大学(千葉県千葉市)
    • Year and Date
      2016-07-21
    • Related Report
      2016 Research-status Report
  • [Presentation] Analysis of Muscle Fiber Structure using Clinical CT: Preliminary Analysis using Cadaveric Images2016

    • Author(s)
      Yoshito Otake,Futoshi Yokota, Masaki Takao, Norio Fukuda, Nobuhiko Sugano, Sato Yoshinobu
    • Organizer
      The 16th Annual Meeting of the International Society for Computer Assisted Orthopedic Surgery
    • Place of Presentation
      Congress Convention Center (Osakashi, Osaka)
    • Year and Date
      2016-06-08
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Statistical Estimation of Attachment of Hip Muscles Based on Measurement in Cadavers2016

    • Author(s)
      Norio Fukuda, Yoshito Otake, Masaki Takao, Futoshi Yokota, Takeshi Ogawa, Keisuke Uemura, Ryota Nakaya, Kazunori Tamura,Robert Grupp, Amirhossein Farvardin, Mehran Armand, Nobuhiko Sugano,Yoshinobu Sato
    • Organizer
      The 16th Annual Meeting of the International Society for Computer Assisted Orthopedic Surgery
    • Place of Presentation
      Congress Convention Center (Osakashi, Osaka)
    • Year and Date
      2016-06-08
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research

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Published: 2016-04-21   Modified: 2022-02-16  

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