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Conformation change of synaptotagmin probed by the fluorescent unnatural amino acid in vivo

Research Project

Project/Area Number 16K07072
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Neurochemistry/Neuropharmacology
Research InstitutionOsaka Medical College

Principal Investigator

Sakata Souhei  大阪医科大学, 医学部, 准教授 (40528006)

Project Period (FY) 2016-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsシナプス / シナプトタグミン / 遺伝コード拡張法 / 非天然アミノ酸 / イオンチャネル / ゼブラフィッシュ / 立体構造変化 / アセチルコリン受容体 / 遺伝コード拡張 / シナプス前終末 / 神経筋接合部 / 膜融合 / タンパク質の立体構造変化
Outline of Final Research Achievements

Synaptotagmin (Syt) is known to be the calcium sensor in presynaptic terminals. I have carried out my project to examine conformation changes of Syt in vivo using the genetic code expansion method. This method enables to incorporate the fluorescent unnatural amino acid (Anap) in the polypeptide of target protein as a fluorescent marker for conformation changes. First, I established the technique to apply the method in zebrafish embryo. Second, I searched the position into which Anap is incorporated using acethylcholine receptors and showed that only one site is available for the measurement of Anap fluorescence change. This means that limited positions can be used as an incorporation site to probe conformation change. These are big steps for the measurement of protein structure changes in living animals.

Academic Significance and Societal Importance of the Research Achievements

遺伝コード拡張法はタンパク質の狙った部位特異的に蛍光タグを導入できるなど、非常に有用な方法ではあるが、培養細胞等や一部の発現系などにしか適用できなかった。本研究課題ではこれを生体に応用することに成功した。これは生体で遺伝コード拡張法を機能させた数少ない例である。また今後、他のタンパク質でも同様に細胞内での構造変化に関する情報が得られれば、新規の治療薬の開発につながる可能性もある。

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (10 results)

All 2020 2019 2018 2017 2016

All Journal Article (7 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 7 results,  Open Access: 7 results) Presentation (3 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Polarized PtdIns(4,5)P2distribution mediated by a voltage-sensing phosphatase (VSP) regulates sperm motility2019

    • Author(s)
      Kawai Takafumi、Miyata Haruhiko、Nakanishi Hiroki、Sakata Souhei、Morioka Shin、Sasaki Junko、Watanabe Masahiko、Sakimura Kenji、Fujimoto Toyoshi、Sasaki Takehiko、Ikawa Masahito、Okamura Yasushi
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 116 Issue: 51 Pages: 26020-26028

    • DOI

      10.1073/pnas.1916867116

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Dynamic structural rearrangements and functional regulation of voltage‐sensing phosphatase2019

    • Author(s)
      Sakata S and Okamura Y
    • Journal Title

      Journal of Physiology

      Volume: 597 Issue: 1 Pages: 29-40

    • DOI

      10.1113/jp274113

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] The hydrophobic nature of a novel membrane interface regulates the enzyme activity of a voltage-sensing phosphatase2018

    • Author(s)
      Kawanabe A, Hashimoto M, Mishizawa M, Nishizawa N, Narita H, Yonezawa T, Jinno Y, Sakata S, Nakawaga A and Okamura Y
    • Journal Title

      eLIFE

      Volume: 7 Pages: 2097-2131

    • DOI

      10.7554/elife.41653

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Recent advances in neuromuscular junction research prompted by the zebrafish model2018

    • Author(s)
      Egashira Y, Zempo B, Sakata S and Ono F
    • Journal Title

      Current Opinion in Physiology

      Volume: 4 Pages: 70-75

    • DOI

      10.1016/j.cophys.2018.06.005

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Domain-to-domain coupling in voltage-sensing phosphatase2017

    • Author(s)
      Sakata S, Matsuda M, Kawanabe A, Okamura Y.
    • Journal Title

      Biophysics and Physicobiology

      Volume: 14 Issue: 0 Pages: 85-97

    • DOI

      10.2142/biophysico.14.0_85

    • NAID

      130007041363

    • ISSN
      2189-4779
    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Voltage-dependent motion of the catalytic region of voltage-sensing phosphatase monitored by a fluorescent amino acid2016

    • Author(s)
      Sakata S, Jinno Y, Kawanabe A, Okamura Y
    • Journal Title

      Proc. Natl. Acad. Sci. U. S. A.

      Volume: 113 Issue: 27 Pages: 7521-7526

    • DOI

      10.1073/pnas.1604218113

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Comparison between mouse and sea urchin orthologs of voltage-gated proton channel suggests role of S3 segment in activation gating2016

    • Author(s)
      Sakata S, Miyawaki N, McCormack TJ, Arima H, Kawanabe A, Ozkucur N, Kurokawa T, Jinno Y, Fujiwara Y, Okamura Y
    • Journal Title

      Biochem. Biophys. Acta.

      Volume: 1858 Issue: 12 Pages: 2972-2983

    • DOI

      10.1016/j.bbamem.2016.09.008

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] ゼブラフィッシュの速筋および遅筋における網羅的な遺伝子発現解析2020

    • Author(s)
      坂田宗平、小野富三人
    • Organizer
      第97回日本生理学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Analysis of junctophilin2 knock out zebrafish2019

    • Author(s)
      Sakata S and Ono F
    • Organizer
      9th FAOPS Congress
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] ゼブラフィッシュにおけるジャンクトフィリンの発現と機能の研究2018

    • Author(s)
      坂田宗平、小野富三人
    • Organizer
      第95回日本生理学会大会
    • Related Report
      2018 Research-status Report 2017 Research-status Report

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Published: 2016-04-21   Modified: 2021-02-19  

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