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Loss of USP15 induces cerebellar neurodegeneration involved in the control of RNA metabolism.

Research Project

Project/Area Number 16K07339
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Cell biology
Research InstitutionUniversity of Tsukuba

Principal Investigator

Tsuruta Fuminori  筑波大学, 生命環境系, 助教 (30571450)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsRNA / USP15 / TUT1 / RNA代謝 / Sparcl1 / Sart3 / RNA splicing / spliceosome / cerebellum / motor dysfunctions / RNAスプライシング / スプライシング / 脳神経疾患 / ユビキチン
Outline of Final Research Achievements

In this study, we report that deubiquitinating enzyme, ubiquitin specific peptidase 15 (USP15), regulates neuronal functions by controlling the RNA metabolism. We found that lack of USP15 in mice induces impairment in motor ability with cerebellar malfunction. We also found that USP15 deubiquitinates terminal uridylyl transferase 1 (TUT1), which is responsible for polyuridylation of U6-snRNA, a core factor of spliceosome. TUT1 is normally localized on nucleolus via K63-linked ubiquitination; however, TUT1 redistributed from nucleolus to nucleoplasm after deubiquitination. Lack of USP15 reduced U6-snRNA levels and also widely affects splicing patterns of multiple genes, including Sparcl1. Thus, our results suggest that USP15 is important for spliceosomal functions through the regulation of TUT1, and lack of USP15 may trigger aberrant gene expression related to the maintenance of cerebellar functions and enhance the risk of developing neurodegenerative disorder.

Academic Significance and Societal Importance of the Research Achievements

本課題では、脱ユビキチン化酵素USP15の機能解析を行い、USP15がRNA代謝制御に関わることを見出した。またUSP15の下流で制御される標的遺伝子も同定した。USP15は神経変性疾患をはじめとする様々な疾患との関連性も報告されており、本課題の成果は、これまで明らかにされていなかった疾患のメカニズム解明にもつながる可能性があると考えている。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (13 results)

All 2018 2017 2016 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (2 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results) Book (1 results) Remarks (1 results)

  • [Journal Article] Microglial dynamics during brain development2018

    • Author(s)
      Okajima T, Tsuruta F
    • Journal Title

      Neural Regen. Res.

      Volume: 13 Issue: 2 Pages: 222-223

    • DOI

      10.4103/1673-5374.226386

    • NAID

      120007134251

    • Related Report
      2018 Annual Research Report 2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] KLHL7 promotes TUT1 ubiquitination associated with nucleolar integrity: Implications for retinitis pigmentosa2017

    • Author(s)
      Kim J, Tsuruta F, Okajima T, Yano S, Sato B, Chiba T
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 494 Pages: 220-226

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Quantification of Endosome and Lysosome Motilities in Cultured Neurons Using Fluorescent Probes2017

    • Author(s)
      Tsuruta F, Okajima T, Yano S, Chiba T
    • Journal Title

      J. Vis. Exp.

      Volume: 123 Issue: 123

    • DOI

      10.3791/55488

    • Related Report
      2017 Research-status Report 2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] CACUL1/CAC1 attenuates p53 activity through PML post-translational modification.2017

    • Author(s)
      Fukuda T, Kigoshi-Tansho Y, Naganuma T, Kazaana A, Okajima T, Tsuruta F, Chiba T.
    • Journal Title

      Biochemical and Biophysical Research Communications.

      Volume: 482 Issue: 4 Pages: 863-869

    • DOI

      10.1016/j.bbrc.2016.11.125

    • Related Report
      2017 Research-status Report 2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] USP15 stabilizes the transcription factor Nrf1 in the nucleus, promoting the proteasome gene expression.2016

    • Author(s)
      Fukagai, K., Waku, T., Chowdhury, AM., Kubo, K., Matsumoto, M., Kato, H., Natsume, T., Tsuruta, F., Chiba, T., Taniguchi, H., Kobayashi, A.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 478 Issue: 1 Pages: 363-370

    • DOI

      10.1016/j.bbrc.2016.07.045

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] SCFFbl12 increases p21Waf1/Cip1 expression level through atypical ubiquitin chains synthesis2016

    • Author(s)
      Tsuruta F, Takebe A, Haratake K, Kanemori Y, Kim J, Endo T, Kigoshi Y, Fukuda T, Miyahara M, Ebina M, Baba T, Chiba T
    • Journal Title

      Mol. Cell Biol.

      Volume: 36 Issue: 16 Pages: 2182-2194

    • DOI

      10.1128/mcb.00174-16

    • NAID

      120007129440

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] New insights into the functions of PtdIns(3,5)P2 in the pathogenesis of neurodegeneratative disorders.2016

    • Author(s)
      Tsuruta F
    • Journal Title

      Neural Regen. Res.

      Volume: 11 Issue: 2 Pages: 240-241

    • DOI

      10.4103/1673-5374.177727

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] KIAA0368-deficiency affects disassembly of 26S proteasome under oxidative stress condition.2016

    • Author(s)
      Haratake K, Sato A, Tsuruta F, Chiba T
    • Journal Title

      J Biochem

      Volume: 159 Issue: 6 Pages: 609-618

    • DOI

      10.1093/jb/mvw006

    • NAID

      40020869418

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Cold Shock as a Possible Remedy for Neurodegenerative Disease2016

    • Author(s)
      Aihara T, Tsuruta F
    • Journal Title

      Int J Neurol Neurother

      Volume: 36 Pages: 2182-2194

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Presentation] USP15はTUT1脱ユビキチン化を介してRNAスプライシングを制御する2017

    • Author(s)
      金材炫、鶴田文憲、千葉智樹
    • Organizer
      日本分子生物学会
    • Related Report
      2017 Research-status Report
  • [Presentation] Molecular Basis of Neuronal Disorder Associated with Microglial Functions2016

    • Author(s)
      Fuminori Tsuruta
    • Organizer
      World Gene Convention 2016
    • Place of Presentation
      Shanghai, China
    • Year and Date
      2016-11-03
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Book] 脳内環境辞典2017

    • Author(s)
      鶴田文憲、金材炫、千葉智樹
    • Publisher
      株式会社メディカルドゥ
    • Related Report
      2016 Research-status Report
  • [Remarks] 研究室HP

    • URL

      http://tchibalab.org/publication.html

    • Related Report
      2016 Research-status Report

URL: 

Published: 2016-04-21   Modified: 2020-03-30  

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