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Lipid mapping on single-cell level by imaging mass spectrometry (IMS)

Research Project

Project/Area Number 16K07355
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Cell biology
Research InstitutionKanagawa University of Human Services

Principal Investigator

KIMURA Yoshishige  神奈川県立保健福祉大学, 保健福祉学部, 准教授 (90274703)

Co-Investigator(Renkei-kenkyūsha) SETOU Mitsutoshi  浜松医科大学, 医学部, 教授 (20302664)
Research Collaborator ISHIZAKI Itsuko  
SANADA Noriaki  
KANEKO Tomomi  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2017: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords質量分析イメージング法 / C. エレガンス / モデル生物 / 生体分子 / メタボローム / 質量分析イメージング法 (IMS) / 線虫C.エレガンス / TOF-SIMS / イメージングマススペクトロメトリー / IMS / 線虫 / 細胞構造・機能 / 飛行時間二次イオン質量分析法 / C.エレガンス
Outline of Final Research Achievements

In this study, our goal is to reveal the cellar distribution of biomolecules of C. elegans (a commonly used model organism for the life science) by application of IMS approach. Since C. elegans is a small animal, we have used TRIFT V, TOF-SIMS (Time-of-Flight Secondary Mass Spectrometry) system (ULVAC-PHI, Inc) and TOF-SIMS (IONTOF GmbH), which enables us to obtain nanoscale microstructure. Distribution images of fatty acids and amino acids on single-cell level were obtained using the frozen sections of C. elegans fixed by paraformaldehyde (PFA) cleaned by sputtering of Ar gas cluster ion beam (Ar-GCIB). The images with higher resolution were successfully obtained by the principal component analysis image fusion of TOF-SIMS and microscopic images. In addition, important secondary ions with lower intensity were effectively detected by pixel reduction.

Academic Significance and Societal Importance of the Research Achievements

脂質,アミノ酸などのタンパク質以外の生体分子はこれまで可視化する方法が少なく,分子の局在情報の取得が困難であった.本研究の研究成果により,生命科学の分野で広く用いられているモデル動物で質量分析イメージング法が利用できるようになった.今後,細胞レベルでの多くの生体分子の局在プロファイルの決定機構とその役割を明らかにすることが可能になり,将来的にはヒトを含めた高等動物に還元され,疾病の発病機構の解明や創薬などにつながることが期待される.

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (8 results)

All 2019 2018 2017 Other

All Int'l Joint Research (1 results) Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (4 results) (of which Int'l Joint Research: 2 results)

  • [Int'l Joint Research] コロンビア大学/生物科学部(米国)

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Environmental responsiveness of tubulin glutamylation in sensory cilia is regulated by the p38 MAPK pathway2018

    • Author(s)
      Kimura Y, Tsutsumi K, Konno A, Ikegami K, Hameed S, Kaneko T, Kaplan OI, Teramoto T, Fujiwara M, Ishihara T, Blacque OE, Setou M
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 8392-8392

    • DOI

      10.1038/s41598-018-26694-w

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 脱グルタミン酸化2018

    • Author(s)
      木村芳滋,金子朋未
    • Journal Title

      生体の科学

      Volume: 69 Pages: 480-481

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Principal component analysis image fusion of TOF-SIMS and microscopic images and low intensity secondary ion enhancement by pixel reduction2018

    • Author(s)
      Kazuma Takahashi, Takayuki Yamagishi, Satoka Aoyag, Dan Aoki, Kazuhiko Fukushima, Yoshishige Kimura
    • Journal Title

      Journal of Vacuum Science & Technology B

      Volume: 36 Issue: 3

    • DOI

      10.1116/1.5013218

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 質量分析イメージング法(IMS)を応用した線虫C.elegansの構造解析2019

    • Author(s)
      木村芳滋, 金子朋未, 青柳里果, 瀬藤光利
    • Organizer
      第124回日本解剖学会総会・全国学術総会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Environmental responsiveness of tubulin glutamylation in sensory cilia is regulated by the p38 MAPK pathway2018

    • Author(s)
      Yoshishige Kimura, Koji Tsutsumi, Alu Konno, Koji Ikegami, Saira Hameed, Tomomi Kaneko, Oktay Ismail Kaplan, Takayuki Teramoto, Manabi Fujiwara, Takeshi Ishihara, Oliver E. Blacque, Mitsutoshi Setou
    • Organizer
      第70回日本細胞生物学会・第51回日本発生生物学会合同大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Application of Imaging Mass Spectrometry for C. elegans.2018

    • Author(s)
      Yoshishige Kimura, Tomomi Kaneko, Satoka Aoyagi
    • Organizer
      EMBO Workshop: C. elegans development, cell biology and gene expression
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Imaging mass spectrometry for C. elegans2017

    • Author(s)
      Yoshishige Kimura, Tomomi Kaneko, Satoka Aoyagi
    • Organizer
      21st International C. elegans Conference
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research

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Published: 2016-04-21   Modified: 2020-03-30  

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