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Analysis of calcification mechanism of a coccolithophorid, using the transcripts database and transformation system

Research Project

Project/Area Number 16K07427
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Morphology/Structure
Research InstitutionTokyo University of Pharmacy and Life Science

Principal Investigator

Fujiwara Shoko  東京薬科大学, 生命科学部, 教授 (30266895)

Project Period (FY) 2016-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2019: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2018: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywords石灰化 / ハプト藻 / 円石藻 / バイオミネラリゼーション / 転写産物データベース / 形質転換系 / cDNAマクロアレイ / 微生物
Outline of Final Research Achievements

Coccolithophorids are haptophyte algae which have calcified scales with elaborate morphologies, called coccoliths, on the cell surface. In this study, we aimed to clarify the molecular mechanism of calcification, and obtained the following results, using a coccolithophorid Pleurochrysis haptonemofera: 1) A screening system of calcification-related genes by RNAi has been established. Using the system, candidate genes which had been obtained from cDNA macroarry analysis and transcripts database were screened. 2) In vitro calcification experiments indicated that an SDS-DTT extracted protein and acidic polysaccharide Ph-PS-2 play an important role in crystal nucleation.

Academic Significance and Societal Importance of the Research Achievements

マイクロアレイ解析とRNAiを組み合わせたスクリーニングによって円石形成関連遺伝子を選抜・同定することにより、石灰化機構の全容を分子レベルで解明するための糸口が得られた。その遺伝子群のうちの一つは実際に円石に含まれるタンパク質をコードしており、そのタンパク質は石灰化の最初の重要なステップである結晶核形成に関与していることをin vitro実験からも示すことができた。また、ゲノム解析についてもPleurochrysisのドラフトゲノムを向上させ、2大系統であるEmiliania系統との比較による円石藻の一般性と特異性の理解のための足掛かりが得られたものと考えられる。

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (27 results)

All 2020 2019 2018 2017 2016 Other

All Journal Article (9 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 9 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (16 results) (of which Int'l Joint Research: 3 results,  Invited: 1 results) Remarks (2 results)

  • [Journal Article] Energy conservation in photosynthetic microorganisms2020

    • Author(s)
      Okada, K., S. Fujiwara, M. Tsuzuki
    • Journal Title

      The Journal of General and Applied Microbiology

      Volume: 66 Issue: 2 Pages: 59-65

    • DOI

      10.2323/jgam.2020.02.002

    • NAID

      130007855508

    • ISSN
      0022-1260, 1349-8037
    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Physiological Properties of Photoautotrophic Microalgae and Cyanobacteria Relevant to Industrial Biomass Production2019

    • Author(s)
      Tsuzuki Mikio、Okada Katsuhiko、Isoda Haruna、Hirano Masayuki、Odaka Tetsuo、Saijo Hirotaka、Aruga Risa、Miyauchi Hiroki、Fujiwara Shoko
    • Journal Title

      Marine Biotechnology

      Volume: in press Issue: 3 Pages: 406-415

    • DOI

      10.1007/s10126-019-09890-1

    • Related Report
      2019 Annual Research Report 2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Hyper-resistance to arsenate in the cyanobacterium Synechocystis sp. PCC 6803 is influenced by the differential kinetics of its pst-ABC transporters and external phosphate concentration exposure2019

    • Author(s)
      Murota Chisato、Fujiwara Shoko、Tsujishita Maki、Urabe Kanae、Takayanagi Shuta、Aoki Motohide、Umemura Tomonari、Eaton-Rye Julian J.、Pitt Frances D.、Tsuzuki Mikio
    • Journal Title

      Algal Research

      Volume: 38 Pages: 101410-101410

    • DOI

      10.1016/j.algal.2019.101410

    • Related Report
      2019 Annual Research Report 2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Regulatory carbon metabolism underlying seawater-based promotion of triacylglycerol accumulation in Chlorella kessleri2019

    • Author(s)
      Otaki Rie、Oishi Yutaro、Abe Seiya、Fujiwara Shoko、Sato Norihiro
    • Journal Title

      Bioresource Technology

      Volume: 289 Pages: 121686-121686

    • DOI

      10.1016/j.biortech.2019.121686

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Involvement of acidic polysaccharide Ph-PS-2 and protein in initiation of coccolith mineralization, as demonstrated by in vitro calcification on the base plate2018

    • Author(s)
      Sakurada, S., S. Fujiwara, M. Suzuki, T. Kogure, T. Uchida, T. Umemura, M. Tsuzuki
    • Journal Title

      Mar. Biotechnol.

      Volume: 印刷中 Issue: 3 Pages: 304-312

    • DOI

      10.1007/s10126-018-9818-4

    • Related Report
      2018 Research-status Report 2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Carbonic anhydrase inhibitors induce developmental toxicity during zebrafish embryogenesis, especially in the inner ear.2017

    • Author(s)
      Matsumoto, H., S. Fujiwara, H. Miyagi, N. Nakamura, Y. Shiga, T. Ohta, M. Tsuzuki
    • Journal Title

      Mar. Biotechnol.

      Volume: 19 Issue: 5 Pages: 430-440

    • DOI

      10.1007/s10126-017-9763-7

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Pleurochrysome: A web-database of Pleurochrysis transcripts and orthologues among heterogeneous algae.2016

    • Author(s)
      Yamamoto N, Kudo T, Fujiwara S, Takatsuka Y, Hirokawa Y, Tsuzuki M, Takano T, Kobayashi M, Suda K, Asamizu E, Yokoyama K, Shibata D, Tabata S, Yano K
    • Journal Title

      Plant Cell Physiol.

      Volume: 57 Issue: 1 Pages: e6-e6

    • DOI

      10.1093/pcp/pcv195

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Profiling of lipid and glycogen accumulations under different growth conditions in the sulfothermophilic red alga Galdieria sulphuraria.2016

    • Author(s)
      Sakurai, T., Aoki, M., Ju, X., Ueda, T., Nakamura, Y., Fujiwara, S., Umemura, T., Tsuzuki, M., and Minoda, A.
    • Journal Title

      Bioresource Technology

      Volume: 200 Pages: 861-866

    • DOI

      10.1016/j.biortech.2015.11.014

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Arsenic metabolism in cyanobacteria.2016

    • Author(s)
      (1)Miyashita, S., Murota, C., Kondo, K., Fujiwara S., Tsuzuki, M.
    • Journal Title

      Environ. Chem.

      Volume: 13 Issue: 4 Pages: 577-589

    • DOI

      10.1071/en15071

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Presentation] 円石藻 Pleurochrysis haptonemofera における円石形成因子 (ConC12)の解析2019

    • Author(s)
      犬飼茉由加,勝股祐貴,浅川航輝,遠藤博寿,藤原祥子,都筑幹夫
    • Organizer
      日本植物学会第83回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 円石藻Pleurochrysisにおける石灰化関連因子(ConC12)の解析2019

    • Author(s)
      犬飼茉由加、勝股祐貴、浅川航輝、櫻田舜人、藤原祥子
    • Organizer
      第13回バイオミネラリゼーションワークショップ
    • Related Report
      2019 Annual Research Report
  • [Presentation] Phosphate uptake by the green alga Chlorella and its application.2019

    • Author(s)
      Miyauchi, H., K. Harada, K. Okada, M. Tsuzuki, S. Fujiwara
    • Organizer
      Marine Biotechnology Conference 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] トレボウクシア藻パラクロレラの気相中付着状態における光合成特性2019

    • Author(s)
      宮内啓喜, 岡田克彦, 都筑幹夫, 藤原祥子
    • Organizer
      第10回日本光合成学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 微細藻類の気相中付着状態における生理学的特徴および光合成特性2019

    • Author(s)
      宮内啓喜, 岡田克彦, 都筑幹夫, 藤原祥子
    • Organizer
      第8回医薬工3大学包括連携推進シンポジウム
    • Related Report
      2019 Annual Research Report
  • [Presentation] 固相表面を利用した微細藻類培養とその能力評価2018

    • Author(s)
      宮内 啓喜、原田 康平、青田 侑生、岡田 克彦、藤原 祥子、都筑 幹夫
    • Organizer
      第7回医薬工3大学包括連携推進シンポジウム
    • Related Report
      2018 Research-status Report
  • [Presentation] バイオテクノロジーを目指した微細藻類によるリン・窒素の吸収2018

    • Author(s)
      原田 康平、宮内 啓喜、岡田 克彦、都筑 幹夫、藤原 祥子
    • Organizer
      日本植物学会第82回大会
    • Related Report
      2018 Research-status Report
  • [Presentation] デンプンブランチングエンザイム耐熱化の試み2018

    • Author(s)
      宮内 啓喜、福良 光起、中村 保典、横堀 伸一、八木 創太、 山岸 明彦、藤原 祥子
    • Organizer
      第20回マリンバイオテクノロジー学会
    • Related Report
      2018 Research-status Report
  • [Presentation] Analysis of the factors involved in coccolith formation in the coccolithophore Pleurochrysis haptonemofera2017

    • Author(s)
      Asakawa K, Sakurada S, Fujiwara S, Endo H, Suzuki M, Kogure T, Kubo R, Amano K, Tsuzuki M
    • Organizer
      BiominXIV, 14th International Symposium on Biomineralizaion
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] SSCC-type photobioreacter and possible application of wastewater to the algal culture and phosphorus retrieval2017

    • Author(s)
      Harada K, Miyauchi H, Aota Y, Sato R, Okada K, Fujiwara S, Tsuzuki M
    • Organizer
      The 16 th International Symposium on Advanced Technology (ISAT16 th)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 植物プランクトンの 美しいミクロの世界をのぞいてみませんか?2017

    • Author(s)
      藤原祥子
    • Organizer
      第26回日本バイオイメージング学会市民公開講座
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 固相表面上のクロレラにおける光合成能力と排水中リン回収能力2017

    • Author(s)
      宮内啓喜, 原田康平, 青田侑生, 岡田克彦, 藤原祥子, 都筑幹夫
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Research-status Report
  • [Presentation] クロレラにおけるトリアシルグリセロール蓄積機構2017

    • Author(s)
      大滝理恵, 林泰平, 平井一帆, 藤原祥子, 都筑幹夫, 佐藤典裕
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Research-status Report
  • [Presentation] クロレラにおける TG 蓄積機構2017

    • Author(s)
      大滝理恵、林泰平、平井一帆、藤原祥子、都筑幹夫、佐藤典裕
    • Organizer
      第30回植物脂質シンポジウム
    • Related Report
      2017 Research-status Report
  • [Presentation] 円石藻 Pleurochrysisの円石形成2016

    • Author(s)
      櫻田舜人, 鈴木道生, 小暮敏博, 藤原祥子, 都筑幹夫
    • Organizer
      第11回バイオミネラリゼーションワークショップ
    • Place of Presentation
      柏
    • Year and Date
      2016-11-11
    • Related Report
      2016 Research-status Report
  • [Presentation] RNAi による円石藻 Pleurochrysisの円石形成関連遺伝子の探索2016

    • Author(s)
      浅川航輝, 藤原祥子, 遠藤博寿, 都筑幹夫
    • Organizer
      第11回バイオミネラリゼーションワークショップ
    • Place of Presentation
      柏
    • Year and Date
      2016-11-11
    • Related Report
      2016 Research-status Report
  • [Remarks] http://bioinf.mind.meiji.ac.jp/phapt/

    • Related Report
      2018 Research-status Report
  • [Remarks] Pleurochrysome

    • URL

      http://bioinf.mind.meiji.ac.jp/phapt/index.html

    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2021-02-19  

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