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Study of the biological clock in the basal plant Physcomitrella patens -Toward understanding diversification principles of the clock functions.

Research Project

Project/Area Number 16K07447
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Genetics/Chromosome dynamics
Research InstitutionNagoya University

Principal Investigator

Aoki Setsuyuki  名古屋大学, 情報学研究科, 准教授 (30283469)

Research Collaborator Nakai Kohta  
Sato Kensuke  
Ryo Masashi  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2018: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2017: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2016: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywords生物時計 / ヒスチジンキナーゼ / 二成分制御系 / ヒメツリガネゴケ / 逆遺伝学 / PASドメイン / 概日時計 / 遺伝子 / 進化 / ゲノム / シグナル伝達 / 植物
Outline of Final Research Achievements

The molecular mechanism of a biological clock (circadian clock) was studied by using the moss Physcomitrella patens, a basal plant model species, to which reverse genetics is efficiently applicable. As a main result, a novel type of eukaryotic histidine kinases, PHK1 and PHK2, which are unique to ancient lineages such as bryophytes and lycophytes, were identified. It was revealed that they regulate development of gametophore tissues positively or negatively depending on ambient oxygen conditions. Moreover, HPt2 was identified as a factor functioning downstream of PHK1 and PHK2, indicating the presence of a two-component system that might function in the circadian clock mechanisms in basal land plants.

Academic Significance and Societal Importance of the Research Achievements

学術的意義:植物の生物時計は、光合成産物の蓄積や生殖のタイミングを制御する重要機構であるが、その進化や多様性に関する研究は進んでいない。この研究では、原始的な系統に属するコケ植物を用い、時計機構に関連深いシグナル伝達因子のPHK1とPHK2が、酸素条件に依存して植物の発生を制御する因子でもあることを明らかにした点で学術的な意義が大きい。社会的意義:この2つのタンパク質の機能研究を進めることで、将来的には湛水耐性の付与や効果的な生殖制御につながる可能性があり、農業や園芸などの応用分野における波及効果が期待される。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (16 results)

All 2018 2017 2016 Other

All Journal Article (2 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 2 results) Presentation (12 results) Remarks (2 results)

  • [Journal Article] PAS-histidine kinases PHK1 and PHK2 exert oxygen-dependent dual and opposite effects on gametophore formation in the moss Physcomitrella patens.2018

    • Author(s)
      Masashi Ryo, Takafumi Yamashino,Hisanori Yamakawa, Yuichi Fujita and Setsuyuki Aoki.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 503 Issue: 4 Pages: 2861-2865

    • DOI

      10.1016/j.bbrc.2018.08.056

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Light-regulated PAS-containing histidine kinases delay gametophore formation in the moss Physcomitrella patens2018

    • Author(s)
      Ryo, M., Yamashino, T., Nomoto, Y., Goto, Y., Ichinose, M., Sato, K., Sugita, M. and Aoki, S.
    • Journal Title

      J. Exp. Bot.

      Volume: 69 Issue: 20 Pages: 4839-4851

    • DOI

      10.1093/jxb/ery257

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] ヒメツリガネゴケのPASヒスチジンキナーゼの研究2018

    • Author(s)
      中井皐太、佐藤健介、龍昌志、山篠貴史、野本友司、後藤友規、一瀬瑞穂、杉田護、青木摂之
    • Organizer
      名古屋生物リズム研究会
    • Related Report
      2018 Annual Research Report
  • [Presentation] ヒメツリガネゴケにおけるPASヒスチジンキナーゼを含む二成分制御系の同定2018

    • Author(s)
      中井皐太、佐藤健介、龍昌志、山篠貴史、野本友司、後藤友規、一瀬瑞穂、杉田護、青木摂之
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] ヒメツリガネゴケのPASヒスチジンキナーゼの機能解析2018

    • Author(s)
      青木摂之、龍昌志、野本友司、後藤友規、佐藤健介、中井皐太、一瀬瑞穂、杉田護、山篠貴史
    • Organizer
      日本遺伝学会第90回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] コケ植物のPASヒスチジンキナーゼの機能解析2018

    • Author(s)
      佐藤健介、山篠貴史、龍昌志、山川壽伯、藤田祐一、青木摂之
    • Organizer
      日本農芸化学会第183回支部例会
    • Related Report
      2018 Annual Research Report
  • [Presentation] ヒメツリガネゴケの茎葉体形成を制御するHKの解析2018

    • Author(s)
      龍昌志、青木摂之
    • Organizer
      第二回名古屋リズム研究会
    • Related Report
      2017 Research-status Report
  • [Presentation] ヒメツリガネゴケのPAS-HKは茎葉体形成を抑制する2018

    • Author(s)
      龍昌志、山篠貴史、野本友司、後藤友規、一瀬瑞穂、杉田護、青木摂之
    • Organizer
      日本農芸化学会2018年度名古屋大会
    • Related Report
      2017 Research-status Report
  • [Presentation] ヒメツリガネゴケのPAS含有HKと概日時計2017

    • Author(s)
      龍昌志、野本友司、山篠貴史、松尾拓哉、後藤友規、佐藤健介、一瀬瑞穂、杉田護、青木摂之
    • Organizer
      第58回日本植物生理学年会
    • Place of Presentation
      鹿児島大学郡元キャンパス
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] ヒメツリガネゴケの茎葉体形成を抑制する二成分制御系の研究2017

    • Author(s)
      龍昌志、野本友司、後藤友規、一瀬瑞穂、杉田護、山篠貴史、青木摂之
    • Organizer
      日本農芸化学会中部支部第180回例会
    • Related Report
      2017 Research-status Report
  • [Presentation] ヒメツリガネゴケの茎葉体形成を抑制する二成分制御系の解析2017

    • Author(s)
      龍昌志、野本友司、後藤友規、佐藤健介、一瀬瑞穂、杉田護、山篠貴史、青木摂之
    • Organizer
      日本遺伝学会第89回大会
    • Related Report
      2017 Research-status Report
  • [Presentation] Circadian Clock in the Moss Physcomitrella patens2017

    • Author(s)
      Ryo Masashi, Santosh B. Satbhai, Yuki Goto, Kensuke Sato, Ryo Okada, Takashi Yamashino, Takuya Matsuo, Mizuho Ichinose, Mamoru Sugita and Setsuyuki Aoki
    • Organizer
      Circadian Clock of Cyanobacteria during 1991-2017
    • Place of Presentation
      Nagoya University, Sakata-Hirata Hall, Nagoya.
    • Related Report
      2016 Research-status Report
  • [Presentation] ヒメツリガネゴケの疑似レスポンスレギュレータータンパク質と相互作用する因子の探索2016

    • Author(s)
      龍昌志、野本友司、山篠貴史、松尾拓哉、後藤友規、佐藤健介、一瀬瑞穂、杉田護、青木摂之
    • Organizer
      第23回日本時間生物学会
    • Place of Presentation
      名古屋大学、名古屋
    • Related Report
      2016 Research-status Report
  • [Presentation] Study of factors that potentially interact with the Pseudo-Response Regulator proteins in the moss Physcomitrella patens2016

    • Author(s)
      Masashi Ryo, Yuji Nomoto, Takafumi Yamashino, Takuya Matsuo, Yuki Goto, Kensaku Sato, Mizuho Ichinose, Mamoru Sugita and Setsuyuki Aoki
    • Organizer
      International Symposium on Biological Rhythms
    • Place of Presentation
      Nagoya University, Nagoya.
    • Related Report
      2016 Research-status Report
  • [Remarks] 青木研website

    • URL

      https://sites.google.com/view/aoki-lab/home

    • Related Report
      2018 Annual Research Report
  • [Remarks] 名古屋大学大学院情報学研究科青木研究室ホームページ

    • URL

      https://inforhythmlab.jimdo.com/

    • Related Report
      2017 Research-status Report 2016 Research-status Report

URL: 

Published: 2016-04-21   Modified: 2020-03-30  

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