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Function analysis of diadenosine polyphosphate in myxobacterium

Research Project

Project/Area Number 16K07667
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionKagawa University

Principal Investigator

Kimura Yoshio  香川大学, 農学部, 教授 (10243750)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2018: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords粘液細菌 / ジアデノシンポリリン酸 / Nudix hydrolase / アミノアシルtRNA合成酵素 / シグナル物質
Outline of Final Research Achievements

Myxococcus xanthus increased diadenosine polyphosphate (Ap4A and Ap5A) by several to five times under various stress conditions, but the amount of increase was smaller than that of E. coli. In this strain, ApnA was mainly synthesized by lysyl-tRNA synthetase and was mainly degraded by ApaH. The intracellular ApnA concentration of apaH deletion mutant was a 5-10-fold higher than that of wild-type strain, and the mutant reduced spore formation. Since Ap5A strongly inhibited adenylate kinase activity, energy homeostasis can not be maintained. Therefore, ApnA is sequentially degraded by the degrading enzyme in this bacterium and is maintained at a low concentration.

Academic Significance and Societal Importance of the Research Achievements

粘液細菌における種々のストレス条件下における細胞内ジアデノシンポリリン酸(ApnA)濃度の経時的変化とApnAの合成と分解に関わる主要な酵素を明らかにした。ApnA分解酵素欠損株では、細胞内のApnA濃度が5-10倍程度増加したが、種々のストレスに対して耐性にはならず、むしろ胞子形成の低下が見られた。
これらのことから、本菌はストレス条件下で生成されるApnAは本菌にとって有益に機能しないため、逐次分解しAMP、ADP及びATPにすることで特にAp5Aによるアデニル酸キナーゼの活性阻害を抑制し、エネルギーの恒常性を維持することで飢餓時での胞子形成を阻害させないようにしていることが示唆された。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (18 results)

All 2019 2018 2017 2016

All Journal Article (7 results) (of which Peer Reviewed: 7 results,  Acknowledgement Compliant: 2 results) Presentation (11 results)

  • [Journal Article] Enzymatic characteristics of two adenylate kinases, AdkA and AdkB, from Myxococcus xanthus2019

    • Author(s)
      Kimura Yoshio、Yamamoto Hiroyuki、Kamatani Shiori
    • Journal Title

      The Journal of Biochemistry

      Volume: 165 Issue: 4 Pages: 379-385

    • DOI

      10.1093/jb/mvy112

    • NAID

      40021893485

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enzymatic characteristics of Nudix hydrolase 2 (Nud2), an 8-oxo-dGTP hydrolase from Myxococcus xanthus2019

    • Author(s)
      Kimura, Y., Kajimoto, S, Yamamoto, Y., Tanaka, N.
    • Journal Title

      Journal of General and Applied Microbiology

      Volume: 印刷中

    • NAID

      130007831088

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of major enzymes involved in the synthesis of diadenosine tetraphosphate and/or adenosine tetraphosphate in Myxococcus xanthus.2018

    • Author(s)
      Kimura, Y., Tanaka, C., and Oka, M.
    • Journal Title

      Current Microbiology

      Volume: 印刷中 Issue: 7 Pages: 811-817

    • DOI

      10.1007/s00284-018-1452-x

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Substrate specificity of Nudix hydrolases from <i>Myxococcus xanthus</i>2018

    • Author(s)
      Kimura, Y., Yamamoto, Y., Kajimoto, S., Sakai, A., and Takegawa, K.
    • Journal Title

      The Journal of General and Applied Microbiology

      Volume: 64 Issue: 2 Pages: 94-98

    • DOI

      10.2323/jgam.2017.07.001

    • NAID

      130006743072

    • ISSN
      0022-1260, 1349-8037
    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Catalytic activity profile of polyphosphate kinase 1 from Myxococcus xanthus.2017

    • Author(s)
      Kamatani, S., Takegawa, K., and Kimura, Y.
    • Journal Title

      Current Microbiology

      Volume: 75 Issue: 4 Pages: 379-385

    • DOI

      10.1007/s00284-017-1391-y

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] High concentrations of intracellular Ap4A and/or Ap5A in developing Myxococcus xanthus cells inhibit sporulation2017

    • Author(s)
      Kimura, Y., Tanaka, C., Sasaki, K., and Sasaki, M.
    • Journal Title

      Microbiology

      Volume: 163 Issue: 1 Pages: 86-93

    • DOI

      10.1099/mic.0.000403

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Lysyl-tRNA synthetase from Myxococcus xanthus catalyzes the formation of diadenosine penta- and hexaphosphates from adenosine tetraphosphate2016

    • Author(s)
      Oka, M., Takegawa, K., and Kimura, Y.
    • Journal Title

      Archives of Biochemistry and Biophysics

      Volume: 604 Pages: 152-158

    • DOI

      10.1016/j.abb.2016.07.002

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Myxococcus xanthusにおけるアデニル酸キナーゼの酵素学的諸性質2018

    • Author(s)
      山本寛之、木村義雄
    • Organizer
      第91回日本生化学大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 粘液細菌Myxococcus xanthusにおけるポリリン酸キナーゼの酵素学的諸性質の解析2018

    • Author(s)
      鎌谷しおり、木村義雄
    • Organizer
      第91回日本生化学大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 粘液細菌Myxococcus xanthusが有するNudix hydrolaseの酵素学的諸性質について2018

    • Author(s)
      梶本紗也佳、木村義雄
    • Organizer
      第91回日本生化学大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Myxococcus xanthusにおけるポリリン酸分解酵素の酵素学的諸性質2018

    • Author(s)
      蟹江航晴、木村義雄
    • Organizer
      第91回日本生化学大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 粘液細菌におけるジアデノシン4リン酸とアデノシン4リン酸を合成する主要酵素の同定2018

    • Author(s)
      木村義雄、岡茉奈美
    • Organizer
      第91回日本生化学大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 粘液細菌Myxococcus xanthusのlysyl-tRNA合成酵素によるジアデノシンポリリン酸合成2017

    • Author(s)
      木村義雄、岡茉奈美
    • Organizer
      生命科学系学会合同年次大会(日本生化学会、日本分子生物学会合同大会)
    • Related Report
      2017 Research-status Report
  • [Presentation] 粘液細菌Myxococcus xanthusが有するNudix hydrolaseの基質特異性について2017

    • Author(s)
      梶本紗也佳、木村義雄
    • Organizer
      生命科学系学会合同年次大会(日本生化学会、日本分子生物学会合同大会)
    • Related Report
      2017 Research-status Report
  • [Presentation] Myxococcus xanthusにおけるジアデノシン4リン酸及びアデノシン4リン酸を合成する酵素について2017

    • Author(s)
      田中千尋、木村義雄
    • Organizer
      生命科学系学会合同年次大会(日本生化学会、日本分子生物学会合同大会)
    • Related Report
      2017 Research-status Report
  • [Presentation] Myxococcus xanthusにおけるポリリン酸キナーゼ1の酵素学的諸性質の解析2017

    • Author(s)
      鎌谷しおり、木村義雄
    • Organizer
      生命科学系学会合同年次大会(日本生化学会、日本分子生物学会合同大会)
    • Related Report
      2017 Research-status Report
  • [Presentation] Myxococcus xanthusにおけるリシル-tRNA合成酵素の酵素学的諸性質の研究2016

    • Author(s)
      岡茉奈美、木村義雄
    • Organizer
      第89回日本生化学会大会
    • Place of Presentation
      仙台国際センター
    • Related Report
      2016 Research-status Report
  • [Presentation] Myxococcus xanthusの胞子形成におけるジアデノシン4リン酸の役割について2016

    • Author(s)
      田中千尋、佐々木雅史、木村義雄
    • Organizer
      第89回日本生化学会大会
    • Place of Presentation
      仙台国際センター
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2020-03-30  

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