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Identification of putative replication origin(s) and its application in unicellular red algae Cyanidioschyzon merolae

Research Project

Project/Area Number 16K07675
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionTokyo University of Agriculture

Principal Investigator

WATANABE Satoru  東京農業大学, 生命科学部, 准教授 (10508237)

Research Collaborator KANESAKI Yu  
OHBA Yusaku  
IWAGAMI Masanobu  
YOSHIKAWA Kanako  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2018: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2017: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
KeywordsDNA複製 / 複製開始 / 人工染色体 / ゲノム / 微生物ゲノム / 応用微生物
Outline of Final Research Achievements

Regulation of DNA replication is essential for maintaining precise chromosomal copy number in all organisms. In yeast and animal cells, the mechanism of DNA replication initiation has been revealed, however the observation of that is very limited in algae and green plants. Cyanidioschyzon merolae is unicellular red algae, living under high temperature and strong acidity such as hot spring. C. merolae have simple cell structure and genome, thus this organism is suitable to study the basic principle of plant DNA replication initiation mechanism. In this study, we investigated DNA replication start sites in C. merolae by ChIP-seq and Repli-seq analysis and found several candidates. In addition, we constructed vector contains marker gene and centromere for the platform of artificial chromosome. Our study will contribute for not only understanding plant DNA replication but also developing algae genome biology.

Academic Significance and Societal Importance of the Research Achievements

シゾンは植物の基本的な細胞機能を解析するモデルとして期待されており、本研究から得られた成果を高等生物へとフィードバックすることで、農学を始め幅広い分野に応用可能である。また近年、単細胞性の真核藻類は有用物質生産のホストとして期待が高まっている。コンタミネーションのリスクが低いシゾンは物質生産のホストとしても高いポテンシャルを秘めており、本研究はシゾンをはじめとする藻類ゲノム工学の発展に大きく貢献できる。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (3 results)

All 2018 2016

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (2 results)

  • [Journal Article] ParA-like protein influences the distribution of multi-copy chromosomes in cyanobacterium Synechococcus elongatus PCC 7942.2018

    • Author(s)
      Watanabe S, Noda A, Ohbayashi R, Uchioke K, Kurihara A, Nakatake S, Morioka S, Kanesaki Y, Chibazakura T, Yoshikawa H
    • Journal Title

      Microbiology

      Volume: 164 Issue: 1 Pages: 45-56

    • DOI

      10.1099/mic.0.000577

    • Related Report
      2018 Annual Research Report 2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 細胞紅藻Cyanidioschyzon merolaeにおける核ゲノム複製開始点の解析2016

    • Author(s)
      岩上匡伸、山川健太、大庭優作、兼崎友、渡辺智、千葉櫻拓、吉川博文
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2016-12-01
    • Related Report
      2016 Research-status Report
  • [Presentation] 細胞紅藻Cyanidioschyzon merolaeにおける核ゲノム複製開始点の解析2016

    • Author(s)
      岩上匡伸、山川健太、大庭優作、兼崎友、千葉櫻拓、渡辺智、吉川博文
    • Organizer
      日本植物学会第80回大会
    • Place of Presentation
      沖縄コンベンションセンター
    • Year and Date
      2016-09-16
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2020-03-30  

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