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Development and validation of rapid intraoperative diagnosis system for malignant glioma

Research Project

Project/Area Number 16K08964
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Laboratory medicine
Research InstitutionUniversity of Yamanashi

Principal Investigator

YOSHIMURA Kentaro  山梨大学, 大学院総合研究部, 助教 (70516921)

Research Collaborator KAWATAKI Tomoyuki  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2018: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsがん診断 / アンビエント質量分析 / 機械学習 / 質量分析 / アンビエント / リアルタイム / 迅速診断 / リアルタイム質量分析 / 大気圧イオン化法 / 統計数学
Outline of Final Research Achievements

We constructed a mass spectral database of human non-tumor and cerebral tumor tissues with labels of tumor grades (grade I-IV) and patient information. To confirm the discrimination ability of learning machine (logistic regression)-based diagnostic algorithm, stored data were divided into the sub groups, and leave-one-out cross-validation was performed. As a result, the discrimination accuracy for non-tumor/tumor or tumor grade were over 80%. This result suggest that our system is useful for diagnosis of human cerebral tumor. In addition, we constructed the real-time and remote sampling probe. It enables us to perform intraoperative diagnosis without extirpation of tissues.

Academic Significance and Societal Importance of the Research Achievements

本研究で開発するシステムは悪性神経膠腫の存在診断および質的診断の術中支援を、これまでにない迅速性と判定精度で遂行可能とするものであり、手術時間の短縮や切除領域の正確な判断により患者の予後改善に寄与することができる。検証の結果、腫瘍の検出に加えてグレード判別も可能であることが確認でき、これによって例えば腫瘍のグレード4で保険が適用される脳内留置用徐放性製剤を用いるか否かの術中判断にも利用できる。また、ここで構築されたデータは膠芽腫の代謝マップそのものであるため、腫瘍特異的な代謝経路の阻害をターゲットにした、新規抗がん剤の開発に応用できることも意義の一つである。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (24 results)

All 2019 2018 2017 2016 Other

All Journal Article (12 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 11 results,  Open Access: 8 results,  Acknowledgement Compliant: 2 results) Presentation (5 results) Remarks (4 results) Patent(Industrial Property Rights) (3 results)

  • [Journal Article] Real-time analysis of living animals and rapid screening of human fluid samples using remote sampling electrospray ionization mass spectrometry2019

    • Author(s)
      Kentaro Yoshimura, Yuki Yamada, Satoshi Ninomiya, Wen Yuan Chung, Yu-Ting Chang, Ashley Robert Dennison, Kenzo Hiraoka, Sen Takeda, Lee Chuin Chen
    • Journal Title

      Journal of Pharmaceutical and Biomedical Analysis

      Volume: 172 Pages: 372

    • DOI

      10.1016/j.jpba.2019.04.050

    • URL

      https://pure.teikyo.jp/en/publications/8f0cbbe6-7c86-41e6-acd5-e38851def724

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Detection of potential new biomarkers of atherosclerosis by probe electrospray ionization mass spectrometry2018

    • Author(s)
      Johno Hisashi、Yoshimura Kentaro、Mori Yuki、Kimura Tokuhide、Niimi Manabu、Yamada Masaki、Tanigawa Tetsuo、Fan Jianglin、Takeda Sen
    • Journal Title

      Metabolomics

      Volume: 14 Issue: 4 Pages: 1-6

    • DOI

      10.1007/s11306-018-1334-z

    • Related Report
      2018 Annual Research Report 2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Ambient mass spectrometry-based detection system for tumor cells in human blood2018

    • Author(s)
      Kaname Sakamoto, Yuichiro Fujita, Kazuaki Chikamatsu, Shota Tanaka, Sen Takeda, Keisuke Masuyama, Kentaro Yoshimura, Hiroki Ishii
    • Journal Title

      Translational Cancer Research

      Volume: 7 Issue: 3 Pages: 758

    • DOI

      10.21037/tcr.2018.04.20

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Ambient mass spectrometry-based detection system for tumor cells in human b2018

    • Author(s)
      Kaname Sakamoto、Yuichiro Fujita、Kazuaki Chikamatsu、Shota Tanaka、Sen Takeda、Keisuke Masuyama、Kentaro Yoshimura、Hiroki Ishii
    • Journal Title

      Transl Cancer Res

      Volume: In press

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Construction of mass spectra database and diagnosis algorithm for head and neck squamous cell carcinoma2017

    • Author(s)
      Ashizawa Kei、Yoshimura Kentaro、Johno Hisashi、Inoue Tomohiro、Katoh Ryohei、Funayama Satoshi、Sakamoto Kaname、Takeda Sen、Masuyama Keisuke、Matsuoka Tomokazu、Ishii Hiroki
    • Journal Title

      Oral Oncology

      Volume: 75 Pages: 111

    • DOI

      10.1016/j.oraloncology.2017.11.008

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] In vivo endoscopic mass spectrometry using a moving string sampling probe2017

    • Author(s)
      Chen Lee Chuin、Naito Tsubasa、Tsutsui Satoru、Yamada Yuki、Ninomiya Satoshi、Yoshimura Kentaro、Takeda Sen、Hiraoka Kenzo
    • Journal Title

      The Analyst

      Volume: 142 Issue: 15 Pages: 2735

    • DOI

      10.1039/c7an00650k

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Hepatitis B virus prevents excessive viral production via reduction of cell death-inducing DFF45-like effectors2017

    • Author(s)
      Yasumoto Jun、Kasai Hirotake、Yoshimura Kentaro、Otoguro Teruhime、Watashi Koichi、Wakita Takaji、Yamashita Atsuya、Tanaka Tomohisa、Takeda Sen、Moriishi Kohji
    • Journal Title

      Journal of General Virology

      Volume: 98 Issue: 7 Pages: 1762

    • DOI

      10.1099/jgv.0.000813

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Towards Practical Endscopic Mass Spectrometry2017

    • Author(s)
      Lee Chuin Chen、Kentaro Yoshimura、Satoshi Ninomiya、Sen Takeda、Kenzo Hiraoka
    • Journal Title

      Mass Spectrometry

      Volume: 6 Pages: 1-8

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Desorption in Mass Spectrometry2017

    • Author(s)
      Dilshadbek Tursunbayevich Usmanov、Satoshi Ninomiya、Lee Chuin Chen、Subhrakanti Saha、Mridul Kanti Mandal、Yuji Sakai、Rio Takaishi、Ahsan Habib、Kenzo Hiraoka、Kentaro Yoshimura、Sen Takeda、Hiroshi Wada、Hiroshi Nonami
    • Journal Title

      Mass Spectrometry

      Volume: 6 Pages: 1-16

    • NAID

      130005243790

    • Related Report
      2017 Research-status Report 2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Secondary Ion Mass Spectrometry Analysis of Renal Cell Carcinoma with Electrospray Droplet Ion Beams2017

    • Author(s)
      Satoshi Ninomiya、Kentaro Yoshimura、Lee Chuin Chen、Sen Takeda、Kenzo Hiraoka
    • Journal Title

      Mass Spectrometry

      Volume: 6 Pages: 1-6

    • NAID

      130005312295

    • Related Report
      2017 Research-status Report 2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] 連載 フロンティア・リポート[4] 温故知新-リアルタイム質量分析法を応用してがんの基礎研究も可能です2016

    • Author(s)
      竹田 扇、吉村 健太郎
    • Journal Title

      Cancer Board Square

      Volume: 2 Issue: 3 Pages: 632-636

    • DOI

      10.11477/mf.1430200141

    • ISSN
      2189-6410, 2189-6429
    • Year and Date
      2016-10-15
    • Related Report
      2016 Research-status Report
    • Acknowledgement Compliant
  • [Journal Article] Modulation of primary cilia length by melanin-concentrating hormone receptor 12016

    • Author(s)
      Hamamoto A, Yamato S, Katoh Y, Nakayama K, Yoshimura K, Takeda S, Kobayashi Y, *Saito Y
    • Journal Title

      Cellular Signalling

      Volume: 28 Issue: 6 Pages: 572

    • DOI

      10.1016/j.cellsig.2016.02.018

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 質量分析とAIを用いた消化器がんの診断法開発2019

    • Author(s)
      吉村 健太郎
    • Organizer
      第124回日本解剖学会総会・全国学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 大気圧イオン化法-質量分析を用いた大腸がんのメタボロミクス2018

    • Author(s)
      吉村 健太郎
    • Organizer
      第70回日本細胞生物学会 第51回日本発生生物学会 合同大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 質量分析法を用いたリピドーム解析その応用例と展望2017

    • Author(s)
      吉村 健太郎、竹田 扇
    • Organizer
      第122回日本解剖学会総会・全国学術集会
    • Place of Presentation
      長崎大学坂本キャンパス(長崎県)
    • Year and Date
      2017-03-28
    • Related Report
      2016 Research-status Report
  • [Presentation] 質量分析と機械学習を用いた大腸がん診断システムの構築2017

    • Author(s)
      吉村 健太郎、城野 悠志、堂本 貴寛、源 利成、竹田 扇
    • Organizer
      金沢大学がん進展制御研究所共同利用・共同研究拠点シンポジウム
    • Place of Presentation
      金沢東急ホテル(石川県・金沢市)
    • Year and Date
      2017-02-14
    • Related Report
      2016 Research-status Report
  • [Presentation] リアルタイムメタボローム解析システムの構築とその臨床応用2016

    • Author(s)
      吉村 健太郎、城野 悠志、Lee Chuin Chen、竹田 扇
    • Organizer
      第64回質量分析総合討論会
    • Place of Presentation
      ホテル阪急エキスポパーク(大阪府・吹田市)
    • Year and Date
      2016-05-18
    • Related Report
      2016 Research-status Report
  • [Remarks] 質量分析、メタボロミクス、データ解析

    • URL

      http://hh-bd.link

    • Related Report
      2018 Annual Research Report
  • [Remarks] 量分析、メタボロミクス、データ解析

    • URL

      http://hh-bd.link/

    • Related Report
      2017 Research-status Report
  • [Remarks] 質量分析、メタボロミクス、データ解析

    • URL

      http://hh-bd.link/

    • Related Report
      2016 Research-status Report
  • [Remarks] 山梨大学医学部 解剖学講座構造生物学教室

    • URL

      http://www.cellbiology.jp/

    • Related Report
      2016 Research-status Report
  • [Patent(Industrial Property Rights)] 質量分析装置、質量分析方法、質量分析システム、及び質量分析解析プログラム2018

    • Inventor(s)
      吉村 健太郎
    • Industrial Property Rights Holder
      国立大学法人山梨大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2018-004860
    • Filing Date
      2018
    • Related Report
      2018 Annual Research Report
  • [Patent(Industrial Property Rights)] 質量分析装置、質量分析方法、質量分析システム、及び質量分析解析プログラム2018

    • Inventor(s)
      吉村 健太郎、石井 裕貴、チェン リー チュイン
    • Industrial Property Rights Holder
      山梨大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2018-004860
    • Filing Date
      2018
    • Related Report
      2017 Research-status Report
  • [Patent(Industrial Property Rights)] 質量分析装置及び質量分析方法、並びに解析装置及び解析方法2017

    • Inventor(s)
      吉村 健太郎、チェン リー チュイン、二宮 啓
    • Industrial Property Rights Holder
      山梨大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2017-079391
    • Filing Date
      2017
    • Related Report
      2017 Research-status Report

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Published: 2016-04-21   Modified: 2020-03-30  

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