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The analysis of non-coding RNA induced by cancer-associtated transcriptional factors in gastrointestinal cancers

Research Project

Project/Area Number 16K09285
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Gastroenterology
Research InstitutionSapporo Medical University

Principal Investigator

Idogawa Masashi  札幌医科大学, 医学部, 講師 (00404749)

Project Period (FY) 2016-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords癌 / 非コードRNA / p53 / NEAT1 / lncRNA / non-coding RNA / ChIP-seq / long non-coding RNA / 転写因子 / マイクロアレイ
Outline of Final Research Achievements

p53 is one of the most important tumor suppressor genes and the direct transcriptional targets of p53 must be explored to elucidate its functional mechanisms. Thus far, the p53 targets that have been primarily studied are protein-coding genes. In this study, analysis of next-generation chromatin immunoprecipitation-sequencing (ChIP-seq) data for p53 revealed that the lncRNA NEAT1 is a direct transcriptional target of p53. The suppression of NEAT1 induction by p53 attenuates the inhibitory effect of p53 on cancer cell growth and also modulates gene transactivation, including that of many lncRNAs. Furthermore, low expression of NEAT1 is related to poor prognosis in several cancers. These results indicate that the induction of NEAT1 expression contributes to the tumor-suppressor function of p53 and suggest that p53 and NEAT1 constitute a transcriptional network contributing to various biological functions and tumor suppression.

Academic Significance and Societal Importance of the Research Achievements

癌は死因の第一位であり新たな診断治療法の開発が急務である.これまでの研究は蛋白を中心に行われてきたが,近年,蛋白にならない非コードRNAが重要な役割を果たしていることが分かってきた.本研究では癌で最も高頻度に変異している癌抑制遺伝子p53の標的となる非コードRNAを新たに見出した.これによりp53による発癌の抑制機構の一端が明らかになると共に,新たな癌の診断治療への端緒となる可能性も秘めている.

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (18 results)

All 2019 2018 2017 2016

All Journal Article (11 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 11 results,  Open Access: 9 results,  Acknowledgement Compliant: 2 results) Presentation (7 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] Prognostic Effect of Long Noncoding RNA NEAT1 Expression Depends on p53 Mutation Status in Cancer2019

    • Author(s)
      Idogawa, M. Nakase, H. Sasaki, Y. Tokino, T.
    • Journal Title

      J Oncol

      Volume: 1 Pages: 4368068-4368068

    • DOI

      10.1155/2019/4368068

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] High filamin-C expression predicts enhanced invasiveness and poor outcome in glioblastoma multiforme2019

    • Author(s)
      Kamil M, Shinsato Y, Higa N, Hirano T, Idogawa M, Takajo T, Minami K, Shimokawa M, Yamamoto M, Kawahara K, Yonezawa H, Hirano H, Furukawa T, Yoshimoto K, Arita K.
    • Journal Title

      Br J Cancer

      Volume: 120 Issue: 8 Pages: 819-826

    • DOI

      10.1038/s41416-019-0413-x

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Targeted next-generation sequencing of 50 cancer-related genes in Japanese patients with oral squamous cell carcinoma2018

    • Author(s)
      Nakagaki Takafumi、Tamura Miyuki、Kobashi Kenta、Omori Akina、Koyama Ryota、Idogawa Masashi、Ogi Kazuhiro、Hiratsuka Hiroyoshi、Tokino Takashi、Sasaki Yasushi
    • Journal Title

      Tumor Biology

      Volume: 40 Issue: 9 Pages: 0-0

    • DOI

      10.1177/1010428318800180

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Screening for long noncoding RNAs associated with oral squamous cell carcinoma reveals the potentially oncogenic actions of DLEU12018

    • Author(s)
      Nishiyama K、Maruyama R、Niinuma T、Kai M、Kitajima H、Toyota M、Hatanaka Y、Igarashi T、Kobayashi J、Ogi K、Dehari H、Miyazaki A、Yorozu A、Yamamoto E、Idogawa M、Sasaki Y、Sugai T、Tokino Takashi、Hiratsuka H、Suzuki H
    • Journal Title

      Cell Death & Disease

      Volume: 9 Issue: 8 Pages: 826-826

    • DOI

      10.1038/s41419-018-0893-2

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] HSP72 functionally inhibits the anti-neoplastic effects of HDAC inhibitors.2018

    • Author(s)
      Fujii K, Suzuki N, Jimura N, Idogawa M, Kondo T, Iwatsuki K, Kanekura T.
    • Journal Title

      J Dermatol Sci

      Volume: 90 Issue: 1 Pages: 82-89

    • DOI

      10.1016/j.jdermsci.2018.01.002

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Long non-coding RNA NEAT1 is a transcriptional target of p53 and modulates p53-induced transactivation and tumor-suppressor function.2017

    • Author(s)
      Masashi Idogawa, Tomoko Ohashi, Yasushi Sasaki, Hiroshi Nakase, Takashi Tokino
    • Journal Title

      International Joural of Cancer

      Volume: 印刷中 Issue: 12 Pages: 2785-2791

    • DOI

      10.1002/ijc.30689

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Identification and characterization of a metastatic suppressor BRMS1L as a target gene of p53.2017

    • Author(s)
      Koyama R, Tamura M, Nakagaki T, Ohashi T, Idogawa M, Suzuki H, Tokino T, Sasaki Y
    • Journal Title

      Cancer Science

      Volume: 108 Issue: 12 Pages: 2413-2421

    • DOI

      10.1111/cas.13420

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Profiling cancer-related gene mutations in oral squamous cell carcinoma from Japanese patients by targeted amplicon sequencing.2017

    • Author(s)
      Nakagaki T, Tamura M, Kobashi K, Koyama R, Fukushima H, Ohashi T, Idogawa M, Ogi K, Hiratsuka H, Tokino T, Sasaki Y
    • Journal Title

      Oncotarget

      Volume: 8 Issue: 35 Pages: 59113-59122

    • DOI

      10.18632/oncotarget.19262

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Fledglings in p53 signaling network.2017

    • Author(s)
      Tokino T, Idogawa M, Sasaki Y
    • Journal Title

      Oncotarget

      Volume: 8 Issue: 34 Pages: 55768-55769

    • DOI

      10.18632/oncotarget.19229

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] p53 mediates the suppression of cancer cell invasion by inducing LIMA1/EPLIN.2017

    • Author(s)
      Tomoko Ohashi, Masashi Idogawa, Yasushi Sasaki, Takashi Tokino
    • Journal Title

      Cancer Letters

      Volume: 390 Pages: 58-66

    • DOI

      10.1016/j.canlet.2016.12.034

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Identification and characterization of the intercellular adhesion molecule-2 gene as a novel p53 target.2016

    • Author(s)
      Sasaki Y, Tamura M, Takeda K, Ogi K, Nakagaki T, Koyama R, Idogawa M, Hiratsuka H, Tokino T
    • Journal Title

      Oncotarget

      Volume: VOL. 7 Issue: 38 Pages: 61426-61437

    • DOI

      10.18632/oncotarget.11366

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 新規p53標的遺伝子ARVCFはスプライシング変化を誘導し腫瘍抑制に寄与する2019

    • Author(s)
      井戸川 雅史
    • Organizer
      第78回日本癌学会学術総会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 新規p53標的遺伝子ARVCFはスプライシング変化を誘導し腫瘍抑制に寄与する2019

    • Author(s)
      井戸川 雅史
    • Organizer
      第120回北海道癌談話会例会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Identification of hub-long non-coding RNAs (lncRNAs) by the network analysis of lncRNA expression in colorectal cancers.2019

    • Author(s)
      Masashi Idogawa
    • Organizer
      11th AACR-JCA Joint Conference
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] 大腸癌における発現ネットワーク解析によるハブ長鎖非コードRNA(hub-lncRNA)の同定と機能解析2018

    • Author(s)
      井戸川 雅史
    • Organizer
      第77回日本癌学会学術総会
    • Related Report
      2018 Research-status Report
  • [Presentation] The identification of p53 target genes and noncoding RNAs through the combined analysis of RNA-seq and ChIP-seq data2017

    • Author(s)
      Masashi Idogawa
    • Organizer
      The 17th International p53 Workshop
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 癌におけるp53標的長鎖非コードRNA(lncRNA)の探索と発現ネットワーク解析2017

    • Author(s)
      井戸川 雅史
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2017 Research-status Report
  • [Presentation] 癌におけるp53および長鎖非コードRNA(lncRNA)による転写ネットワーク解析2016

    • Author(s)
      井戸川 雅史
    • Organizer
      第75回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2021-02-19  

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