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Genetic exploration in the cause of developing rare lung diseases using whole exome sequence analyses

Research Project

Project/Area Number 16K09557
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Respiratory organ internal medicine
Research InstitutionTokyo Medical and Dental University (2018)
Tokyo Medical University (2016-2017)

Principal Investigator

SETOGUCHI Yasuhiro  東京医科歯科大学, 大学院医歯学総合研究科, 特任教授 (90206649)

Research Collaborator NAKAJIMA Toshihiro  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2018: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords特発性間質性肺炎 / PPFE / ゲノム / エクソーム解析 / 遺伝子 / サーファクタント / テロメア / 細胞接着因子 / 家族性間質性肺炎 / 希少肺疾患 / 特発性肺線維症 / exsome / テロメア関連遺伝子 / エクソーム / 遺伝性間質性肺炎 / 遺伝子変異
Outline of Final Research Achievements

Pleuroparenchymal fibroelastosis (PPFE) is a rare pulmonary fibrosis that is clinically characterized by upper lobe predominant fibrosis. The etiology remains unknown as well as other idiopathic interstitial pneumonias. To explore causative genes in developing PPFE as well as familial interstitial pneumonia (FIP), whole exome analyses or DNA sequence analyses with sanger method were performed in genome from 9 cases with adult-onset PPFE and 47 cases with adult-onset FIP. Deleterious variant in telomere-associated genes or cell adhesion factor associated genes were identified in all PPFE cases. Of FIP without PPFE, 57% was found to carry deleterious variants in surfactant-associated genes.

Academic Significance and Societal Importance of the Research Achievements

稀少間質性肺炎PPFEを除く家族性間質性肺炎のほとんどは、サーファクタント関連遺伝子変異が、またPPFEにおいては、テロメア関連遺伝子変異或いはその遺伝子の転写後制御に関わるRNA変異が病態形成に関わっている可能性を明らかにした。これまで有効な治療もなく予後不良な間質性肺炎の一部であるが成因に関わる遺伝子を特定したことは、今後の治療方開発や予防への大きな糸口となることが期待される。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (14 results)

All 2018 2017 2016

All Journal Article (2 results) Presentation (8 results) (of which Int'l Joint Research: 4 results,  Invited: 1 results) Book (4 results)

  • [Journal Article] HermanskyPudlack症候群ー肺線維症への分子機序ー2017

    • Author(s)
      瀬戸口靖弘
    • Journal Title

      呼吸器内科

      Volume: 31 Pages: 88-94

    • Related Report
      2016 Research-status Report
  • [Journal Article] 間質性肺炎の発症要因にかかわる遺伝子2016

    • Author(s)
      瀬戸口靖弘
    • Journal Title

      最新医学

      Volume: 71 Pages: 1249-1258

    • Related Report
      2016 Research-status Report
  • [Presentation] 成人発症特発性間質性肺炎における発症責任遺伝子同定と臨床的、画像的、呼吸生理学的特徴2018

    • Author(s)
      瀬戸口靖弘
    • Organizer
      第58回日本呼吸器学会学術講演会
    • Related Report
      2018 Annual Research Report 2017 Research-status Report
  • [Presentation] 特発性間質性肺炎の成因に関する責任遺伝子同定から遺伝性間質性肺炎へ2018

    • Author(s)
      瀬戸口靖弘
    • Organizer
      第58回日本呼吸器学会学術講演会 教育講演
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Clinical, Pulmonary Physiological and Genetic Characteristics in Adult-Onset Familial Interstitial Pneumonia (FIP)2018

    • Author(s)
      Yasuhiro Setoguchi
    • Organizer
      American Thoracic Society International Conference 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Fatal cases of pulmonary alveolar proteinosis: a nationwide surveillance in Japan2018

    • Author(s)
      Y Inoue, E Yamaguchi, Y Setoguchi
    • Organizer
      European Respiratory Society International Conference 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Clinical, Physiological and genetic characteristics in adult-onset of familial interstitial pneumonia2018

    • Author(s)
      Setoguchi Y
    • Organizer
      American thoracic society 2018 International conference
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Characteristics of Age at Onset in Adult-Onset Hereditary Interstitial Pneumonia (HIP)2017

    • Author(s)
      Setoguchi Y
    • Organizer
      American Thoracic Society International Conference 2017
    • Place of Presentation
      米国 Washington, D.C.
    • Year and Date
      2017-05-19
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 特発性間質性肺炎の線維化進行に関わる分子動態の検討2017

    • Author(s)
      瀬戸口靖弘
    • Organizer
      第57回日本呼吸器学会学術講演会
    • Place of Presentation
      東京
    • Year and Date
      2017-04-21
    • Related Report
      2016 Research-status Report
  • [Presentation] 特発性間質性肺炎の線維化進行に関連する分子病態の検討2017

    • Author(s)
      瀬戸口靖弘
    • Organizer
      第57回日本呼吸器学会学術講演会
    • Related Report
      2017 Research-status Report
  • [Book] 画像から学ぶびまん性肺疾患(家族性間質性肺炎)2018

    • Author(s)
      瀬戸口靖弘
    • Total Pages
      310
    • Publisher
      克誠堂
    • ISBN
      9784771904989
    • Related Report
      2018 Annual Research Report
  • [Book] 間質性肺炎・肺線維症と類縁疾患2018

    • Author(s)
      瀬戸口靖弘 片柳真司
    • Total Pages
      375
    • Publisher
      中山書店
    • ISBN
      9784521745282
    • Related Report
      2018 Annual Research Report
  • [Book] 多因子遺伝性疾患研究と遺伝カウンセリング2018

    • Author(s)
      瀬戸口靖弘
    • Total Pages
      292
    • Publisher
      メディカルドゥ
    • ISBN
      9784944157266
    • Related Report
      2018 Annual Research Report
  • [Book] 画像から学ぶびまん性肺疾患2018

    • Author(s)
      瀬戸口靖弘
    • Total Pages
      310
    • Publisher
      克誠堂出版
    • Related Report
      2017 Research-status Report

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Published: 2016-04-21   Modified: 2020-03-30  

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