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Dynamical cell-like molecular robots with programmability based on the control of DNA nanostructures on microinterface

Research Project

Project/Area Number 16K12521
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Life / Health / Medical informatics
Research InstitutionTokyo Institute of Technology

Principal Investigator

Takinoue Masahiro  東京工業大学, 情報理工学院, 准教授 (20511249)

Co-Investigator(Renkei-kenkyūsha) ISHIKAWA Daisuke  首都大学東京, 大学院都市環境科学研究科, 特任助教 (00722919)
KAWANO Ryuji  東京農工大学, 工学研究院, 特任准教授 (90401702)
ENDO Masayuki  京都大学, 物質-細胞統合システム拠点, 准教授 (70335389)
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2017: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords分子ロボット / 人工細胞 / DNAナノテクノロジー / DNAオリガミ / マイクロ油中水滴 / マイクロ流体デバイス / 自己組織化 / ピッカリングエマルション / 油中水滴 / カプセル / マイクロ流路
Outline of Final Research Achievements

In this study, we studied the construction of cell-like molecular robots. The molecular robots were made of DNA nanostructures produced by bottom-up assembly of designed DNA, and the molecular robots were produced on an oil-water interface controlled by microfluidic technology. Here, the function was constructed with designed nanometer-sized DNA, which was usually generated by DNA origami technology. The DNA nanodevices were functionalized into amphiphilic molecules and were self-assembled on the oil-water interface of microdroplets. Finally, we developed some basic methods to programmably construct dynamical molecular robot with functions such as molecular sensing, self-propelled motions, etc.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (56 results)

All 2018 2017 2016 Other

All Journal Article (6 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 3 results,  Open Access: 3 results,  Acknowledgement Compliant: 2 results) Presentation (47 results) (of which Int'l Joint Research: 11 results,  Invited: 9 results) Book (1 results) Remarks (2 results)

  • [Journal Article] 骨格で支えられた頑丈な人工細胞-DNAナノテクノロジーによる精密設計2018

    • Author(s)
      黒川知加子, 柳澤実穂, 瀧ノ上正浩
    • Journal Title

      月刊化学

      Volume: vol.73 Pages: 40-43

    • NAID

      40021420920

    • Related Report
      2017 Annual Research Report
  • [Journal Article] Formation of DNA micro-skeleton structures in water-in-oil microdroplets2017

    • Author(s)
      Masamune Morita, Shin-ichiro M. Nomura, Satoshi Murata, Miho Yanagisawa, Masahiro Takinoue
    • Journal Title

      Proc. microTAS

      Volume: - Pages: 159-160

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 生体内で働く分子ロボットの実現へ:情報媒体としてのDNA分子とDNAコンピューティング2017

    • Author(s)
      瀧ノ上正浩
    • Journal Title

      情報管理(JST)

      Volume: vol. 60 Pages: 629-640

    • NAID

      130006234943

    • Related Report
      2017 Annual Research Report
    • Open Access
  • [Journal Article] Influence of asymmetry and driving forces on the propulsion of bubble-propelled catalytic micromotors2016

    • Author(s)
      Masayuki Hayakawa, Hiroaki Onoe, Ken H. Nagai, *Masahiro Takinoue
    • Journal Title

      Micromachines

      Volume: 7(12) Issue: 12 Pages: 229-229

    • DOI

      10.3390/mi7120229

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Self-Assembled Microcapsule of Amphiphilic Janus DNA Nanoplates at the Water-Oil Interface2016

    • Author(s)
      Daisuke Ishikawa, Yuki Suzuki, Chikako Kurokawa, Masayuki Ohara, Masamune Morita, Miho Yanagisawa, Ryuji Kawano, Masayuki Endo, Masahiro Takinoue
    • Journal Title

      Proc. microTAS

      Volume: - Pages: 116-117

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] 連載「DNAナノテクノロジー」―構造をつくり,計算し,ナノロボットを動かす―:第2回ナノテク材料としてのDNA2016

    • Author(s)
      石川大輔, 瀧ノ上正浩
    • Journal Title

      現代化学

      Volume: No.5 Pages: 48-53

    • Related Report
      2016 Research-status Report
  • [Presentation] Artificial cell construction based on micro-scale control of bio soft matter2018

    • Author(s)
      Masahiro Takinoue
    • Organizer
      Mini Workshop: New Frontiers of Supramolecular Chemistry in Non-equilibrium Systems
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] RNA 転写可能な DNA マイクロ構造体の構築2018

    • Author(s)
      渡邉理佐, 森田雅宗, 柳澤実穂, 瀧ノ上正浩
    • Organizer
      第1回分子ロボティクス年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 統合情報理論に基づく意識を持つDNA反応ネットワークの構築2018

    • Author(s)
      渡邉弘貴, 川野竜司, 瀧ノ上正浩
    • Organizer
      第1回分子ロボティクス年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 光によるDNAマイクロゲルの構造制御2018

    • Author(s)
      笠原悠, 渡邉理佐, 瀧ノ上正浩
    • Organizer
      第1回分子ロボティクス年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Reverse micelle charging on particle control and soft microrobot actuation2018

    • Author(s)
      Marcos Masukawa, Masayuki Hayakawa, Masahiro Takinoue
    • Organizer
      第1回分子ロボティクス年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 光応答性DNAオリガミの導入による細胞型分子ロボットの機能構築と解析2018

    • Author(s)
      土屋美恵, 石川大輔, 川野竜司, 瀧ノ上正浩
    • Organizer
      第1回分子ロボティクス年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] RNA 転写可能な DNAマイクロゲル構造体の構築2018

    • Author(s)
      渡邉理佐, 森田雅宗, 柳澤実穂, 瀧ノ上正浩
    • Organizer
      第7回日本生物物理学会関東支部会
    • Related Report
      2017 Annual Research Report
  • [Presentation] バイオソフトマターのナノ/マイクロ制御による人工細胞の構築2018

    • Author(s)
      瀧ノ上正浩
    • Organizer
      産業技術総合研究所バイオメディカル研究部門・部門セミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] マイクロ液滴界面を利用した RNAを発現するDNA マイクロ構造体の構築2017

    • Author(s)
      渡邉理佐, 森田雅宗, 柳澤実穂, 瀧ノ上正浩
    • Organizer
      化学とマイクロ・ナノシステム学会 第35回研究会(35th CHEMINAS)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 両親媒性DNA オリガミによるマイクロ油中水滴の画像解析による定量的安定性評価2017

    • Author(s)
      土屋美恵, 石川大輔, 鈴木勇輝, 遠藤政幸, 瀧ノ上正浩
    • Organizer
      化学とマイクロ・ナノシステム学会 第35回研究会(CHEMINAS35)
    • Related Report
      2017 Annual Research Report
  • [Presentation] Generation of higher-order self-assembled DNA microstructures inside water-in-oil microdroplets2017

    • Author(s)
      Masamune Morita, Shin-ichiro M. Nomura, Satoshi Murata, Miho Yanagisawa, Masahiro Takinoue
    • Organizer
      19th IUPAB congress and 11th EBSA congress
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] DNA ゲルマイクロカプセルのマイクロパターン形成の物理と分子ロボット工学への応用2017

    • Author(s)
      瀧ノ上正浩
    • Organizer
      第78回応用物理学会 秋季学術講演会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Formation of DNA microcapsules and application to cell-like molecular robots2017

    • Author(s)
      Masahiro Takinoue
    • Organizer
      2nd Japan-Korea International Symposium on Cyborgnics: Integration between cell and electronics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Construction of artificial cell nuclei with RNA transcription capability using a microdroplet interface2017

    • Author(s)
      Risa Watanabe, Masamune Morita, Miho Yanagisawa, Masahiro Takinoue
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Surfactant role on microbead manipulation by saw-tooth shaped electrode2017

    • Author(s)
      Marcos Masukawa, Masahiro Takinoue
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 人工細胞でのDNA論理回路を用いた最小限の意識を生み出すオートマトン (Automata that generates minimum consciousness using DNA logic circuits in artificial cells)2017

    • Author(s)
      Hiroki Watanabe, Ryuji Kawano, Masahiro Takinoue
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] DNA分子ロボットのためのマイクロドロップレットの機械的安定性評価 (Evaluation of mechanical stability of microdroplet-based DNA molecular robots.)2017

    • Author(s)
      Misato Tsuchiya, Daisuke Ishikawa, Yuki Suzuki, Masayuki Endo, Masahiro Takinoue
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] マイクロ液滴界面上での相分離による人工細胞核の形成のDNAユニット依存性の解析(Analyses of DNA unit dependence of artificial cell nuclei formed by phase separation on microdroplet interface)2017

    • Author(s)
      Yu Kasahara, Risa Watanabe, Masahiro Takinoue
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Surfactant role on microbead manipulation by saw-tooth electrode2017

    • Author(s)
      Marcos Masukawa, Masayuki Hayakawa, Masahiro Takinoue
    • Organizer
      2nd Japan-Korea International Symposium on Cyborgnics: Integration between cell and electronics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Automata that generates minimum consciousness using DNA logic circuits in artificial cells2017

    • Author(s)
      Hiroki Watanabe, Ryuji Kawano, Masahiro Takinoue
    • Organizer
      2nd Japan-Korea International Symposium on Cyborgnics: Integration between cell and electronics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Evaluation of mechanical stability of DNA molecular robots2017

    • Author(s)
      Misato Tsuchiya, Daisuke Ishikawa, Yuki Suzuki, Masayuki Endo, Masahiro Takinoue
    • Organizer
      2nd Japan-Korea International Symposium on Cyborgnics: Integration between cell and electronics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Construction of artificial cell nuclei with RNA transcription capability using a microdroplet interface2017

    • Author(s)
      Risa Watanabe, Masamune Morita, Miho Yanagisawa, Masahiro Takinoue
    • Organizer
      2nd Japan-Korea International Symposium on Cyborgnics: Integration between cell and electronics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Analyses of DNA unit dependence of artificial cell nuclei formed by phase separation on microdroplet interface2017

    • Author(s)
      Yu Kasahara, Risa Watanabe, Masahiro Takinoue
    • Organizer
      2nd Japan-Korea International Symposium on Cyborgnics: Integration between cell and electronics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Electrical actuators for apolar media microfluidics2017

    • Author(s)
      マスカワマルクス, 瀧ノ上正浩
    • Organizer
      化学とマイクロ・ナノシステム学会 第35回研究会(35th CHEMINAS)
    • Related Report
      2017 Annual Research Report
  • [Presentation] マイクロ液滴界面を利用した RNA転写可能なDNA マイクロ構造体の構築2017

    • Author(s)
      渡邉理佐, 森田雅宗, 柳澤実穂, 瀧ノ上正浩
    • Organizer
      「細胞を創る」研究会 10.0
    • Related Report
      2017 Annual Research Report
  • [Presentation] Formation of DNA micro-skeleton structures in water-in-oil microdroplets2017

    • Author(s)
      Masamune Morita, Shin-ichiro M. Nomura, Satoshi Murata, Miho Yanagisawa, Masahiro Takinoue
    • Organizer
      The 21th International Conference on Miniaturized Systems for Chemistry and Life Sciences (microTAS2017)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] マイクロ液滴界面を利用した RNA 転写可能なDNA ゲルマイクロ構造体の構築2017

    • Author(s)
      渡邉理佐, 森田雅宗, 柳澤実穂, 瀧ノ上正浩
    • Organizer
      第4回サイボウニクス研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] DNAオリガミによる細胞型分子ロボットの光応答機能の構築と解析2017

    • Author(s)
      土屋美恵, 石川大輔, 瀧ノ上正浩
    • Organizer
      第4回サイボウニクス研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] マイクロ液滴界面上でのDNAマイクロ構造体形成のsticky-end依存性の解析2017

    • Author(s)
      笠原悠, 渡邉理佐, 森田雅宗, 瀧ノ上正浩
    • Organizer
      第4回サイボウニクス研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] DNA論理回路を用いたIITにおける最小意識を生み出すネットワークの設計と解析2017

    • Author(s)
      渡邉弘貴, 川野竜司, 瀧ノ上正浩
    • Organizer
      第4回サイボウニクス研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Electric manipulation of microbeads with charged reverse micelles2017

    • Author(s)
      Marcos Masukawa, Masayuki Hayakawa, Masahiro Takinoue
    • Organizer
      第4回サイボウニクス研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 細胞サイズの液滴界面でのDNAゲルの自己組織化とミクロ相分離2017

    • Author(s)
      瀧ノ上正浩
    • Organizer
      2017年度 生命科学系学会合同年次大会 (ConBio2017)
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] アクティブマテリアル研究としての人工細胞・分子ロボットの構築2017

    • Author(s)
      瀧ノ上正浩
    • Organizer
      SMACTIVEマテリアルシンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 温度冷却過程で油中水滴界面上で生成されるDNAマイクロスケルトン構造2017

    • Author(s)
      瀧ノ上正浩
    • Organizer
      Biothermology Workshop
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Microfluidic droplet reactor for artificial/living cellular systems2016

    • Author(s)
      Masahiro Takinoue
    • Organizer
      第54回日本生物物理学会
    • Place of Presentation
      つくば国際会議場, 茨城
    • Year and Date
      2016-11-25
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] マ イクロ液滴界面を利用したRNA転写配列を有するDNAマイクロ構造体の構築 (Construction of DNA micro-structures with RNA transcription sequences using the interface of microdroplets.)2016

    • Author(s)
      Risa Watanabe, Masamune Morita, Miho Yanagisawa, Masahiro Takinoue
    • Organizer
      第54回日本生物物理学会
    • Place of Presentation
      つくば国際会議場, 茨城
    • Year and Date
      2016-11-25
    • Related Report
      2016 Research-status Report
  • [Presentation] プログラマブルな性質を有するDNA ナノプレートからなるマイクロカプセルの形成, Microcapsular compartments composed of programmable DNA nanoplates2016

    • Author(s)
      Daisuke Ishikawa, Yuki Suzuki, Chikako Kurokawa, Masayuki Ohara, Misato Tsuchiya, Masamune Morita, Miho Yanagisawa, Ryuji Kawano, Masayuki Endo, Masahiro Takinoue
    • Organizer
      第54回日本生物物理学会
    • Place of Presentation
      つくば国際会議場, 茨城
    • Year and Date
      2016-11-25
    • Related Report
      2016 Research-status Report
  • [Presentation] 両親媒性DNAオリガミによるW/Oマイクロエマルションの光応答性観察 (Photo-responsive water-in-oil microemulsion made of amphiphilic DNA origami.)2016

    • Author(s)
      Misato Tsuchiya, Daisuke Ishikawa, Yuki Suzuki, Masayuki Endo, Masahiro Takinoue
    • Organizer
      第54回日本生物物理学会
    • Place of Presentation
      つくば国際会議場, 茨城
    • Year and Date
      2016-11-25
    • Related Report
      2016 Research-status Report
  • [Presentation] マイクロ液滴界面を利用したRNA転写配列を 有するDNAフラクタルマイクロ構造体の構築(Construction of DNA fractal micro-structures with RNA transcription sequences using the interface of microdroplets.)2016

    • Author(s)
      渡邉理佐, 森田雅宗, 瀧ノ上正浩
    • Organizer
      「細胞を創る」研究会9.0
    • Place of Presentation
      早稲田大学早稲田キャンパス・井深大記念ホール, 東京
    • Year and Date
      2016-11-21
    • Related Report
      2016 Research-status Report
  • [Presentation] DNAナノ構造体の油水界面集積によるマイクロカプセル形成2016

    • Author(s)
      石川大輔, 鈴木勇輝, 黒川知加子, 大原正行, 土屋美恵, 森田雅宗, 柳澤実穂, 遠藤政幸,瀧ノ上正浩
    • Organizer
      「細胞を創る」研究会9.0
    • Place of Presentation
      早稲田大学早稲田キャンパス・井深大記念ホール, 東京
    • Year and Date
      2016-11-21
    • Related Report
      2016 Research-status Report
  • [Presentation] Self-Assembled Microcapsule of Amphiphilic Janus DNA Nanoplates at the Water-Oil Interface2016

    • Author(s)
      Daisuke Ishikawa, Yuki Suzuki, Chikako Kurokawa, Masayuki Ohara, Masamune Morita, Miho Yanagisawa, Ryuji Kawano, Masayuki Endo, *Masahiro Takinoue
    • Organizer
      The 20th International Conference on Miniaturized Systems for Chemistry and Life Sciences (microTAS2016)
    • Place of Presentation
      Convention Center Dublin, Dublin, Ireland
    • Year and Date
      2016-10-09
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Self-assembly of DNA microstructures on a cationic lipid interface of water-in-oil microdroplet2016

    • Author(s)
      Masamune Morita, Shin-ichiro M. Nomura, Satoshi Murata, Miho Yanagisawa, *Masahiro Takinoue
    • Organizer
      22nd International Conference on DNA Computing and Molecular Programming (DNA22)
    • Place of Presentation
      Ludwig-Maximilians-Universität (LMU), Munich, Germany
    • Year and Date
      2016-09-04
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 油水界面を集積場として利用した DNA ナノ構造体のマイクロカプセル化2016

    • Author(s)
      石川大輔, 鈴木勇輝, 黒川知加子, 森田雅宗, 柳澤実穂, 遠藤政幸, 瀧ノ上正浩
    • Organizer
      化学とマイクロ・ナノシステム学会 第33回研究会 (CHEMINAS33)
    • Place of Presentation
      東京大学生産技術研究所, 東京
    • Year and Date
      2016-04-25
    • Related Report
      2016 Research-status Report
  • [Presentation] 荷電脂質膜界面における DNA ミクロ構造の形成2016

    • Author(s)
      森田雅宗, 石川大輔, 野村 M. 慎一郎, 村田智, 柳澤実穂, 瀧ノ上正浩
    • Organizer
      化学とマイクロ・ナノシステム学会 第33回研究会 (CHEMINAS33)
    • Place of Presentation
      東京大学生産技術研究所, 東京
    • Year and Date
      2016-04-25
    • Related Report
      2016 Research-status Report
  • [Presentation] バイオソフトマターのミクロ制御による分子ロボティクス2016

    • Author(s)
      瀧ノ上正浩
    • Organizer
      理研シンポジウム「細胞システムの動態と論理 ⅦI」
    • Place of Presentation
      理化学研究所(和光), 埼玉
    • Year and Date
      2016-04-14
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] 分子センシングマイクロシステム構築へのアプローチ2016

    • Author(s)
      石川大輔, 鈴木勇輝, 黒川知加子, 大原正行, 森田雅宗, 柳澤実穂, 遠藤政幸,瀧ノ上正浩
    • Organizer
      第4回分子ロボティクス若手の会
    • Place of Presentation
      石川県政記念しいのき迎賓館, 石川
    • Related Report
      2016 Research-status Report
  • [Presentation] 疎水性を付与したDNA ナノプレートによるマイクロカプセル作製2016

    • Author(s)
      石川大輔, 鈴木勇輝, 黒川知加子, 大原正行, 森田雅宗, 柳澤実穂, 遠藤政幸, 瀧ノ上正浩
    • Organizer
      「分子ロボティクス研究会」2016年6月 定例研究会
    • Place of Presentation
      東京工業大学 田町キャンパス, 東京
    • Related Report
      2016 Research-status Report
  • [Book] 人工細胞の創製とその応用 (Promising Construction and Applications of Artificial Smart-Cells)”, 第2章人工膜創製技術:第5節バイオソフトマターの物理工学に基づく非平衡開放系の人工細胞の構築と制御2017

    • Author(s)
      瀧ノ上正浩,他
    • Total Pages
      2015
    • Publisher
      シーエムシー出版
    • Related Report
      2016 Research-status Report
  • [Remarks] 瀧ノ上研究室ホームページ

    • URL

      http://www.takinoue-lab.jp/

    • Related Report
      2017 Annual Research Report
  • [Remarks] 瀧ノ上研究室HP

    • URL

      http://www.takinoue-lab.jp

    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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