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Development of simple and high-performance DNA/RNA chimeric nucleic acid aptamer

Research Project

Project/Area Number 16K12903
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biomedical engineering/Biomaterial science and engineering
Research InstitutionNational Institute of Advanced Industrial Science and Technology

Principal Investigator

MIYAGISHI Makoto  国立研究開発法人産業技術総合研究所, バイオメディカル研究部門, 研究グループ長 (30323538)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords核酸アプタマー / DNA / RNA
Outline of Final Research Achievements

In this study, we proposed to establish fundamental technologies of DNA/RNA chimera-type nucleic acid aptamer using the One Step Selection method. As nucleic acid libraries, we synthesized six randomized library having DNA/RNA chimeric sequences in 17-bases region. Selection was performed on streptavidin by One Step Selection method and enriched sequences were examined. Aptamer sequences thought to be enriched were chemically synthesized and their binding abilities to streptavidin were examined. As a result, although we could obtain clearly enriched sequences, their affinities to streptavidine were not so high compared to streptavidine DNA aptamer. In conclusion, we could not prove the concept of DNA/RNA chimeric nucleic acid aptamer.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (2 results)

All 2017 2016

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Acknowledgement Compliant: 1 results) Presentation (1 results)

  • [Journal Article] Biochemical and structural features of extracellular vesicle-binding RNA aptamers2017

    • Author(s)
      Murakami K, Zhao J, Yamasaki K and Miyagishi M
    • Journal Title

      Biomedical Reports

      Volume: 印刷中

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] ストレプトアビジンに対する新規Gカルテット核酸アプタマーの同定と特性解析2016

    • Author(s)
      猪股 梨華、Zhao Jing、山崎 和彦、宮岸 真
    • Organizer
      日本核酸医薬学会
    • Place of Presentation
      千葉県野田市東京理科大学葛飾キャンパス図書館大ホール
    • Year and Date
      2016-11-15
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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