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Development of protein-labeling probes with OFF-ON-OFF fluorescence switches

Research Project

Project/Area Number 16K13088
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biomolecular chemistry
Research InstitutionOsaka University

Principal Investigator

Hori Yuichiro  大阪大学, 工学研究科, 准教授 (00444563)

Research Collaborator NISHIURA Miyako  
HIRAYAMA Shinya  
OTOMURA Norimichi  
NISHIDA Ayuko  
MORI Kazuma  
YAMASAKI Kohei  
UMENO Maho  
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
KeywordsOFF-ON-OFFプローブ / PYPタグ / 蛋白質分解 / 分子力学計算 / タグ / ラベル化 / OFF-ON-OFF蛍光標識プローブ / OFF-ON-OFF蛍光スイッチ
Outline of Final Research Achievements

In this research, we developed protein labeling probes for imaging protein lifetime using our original PYP-tag labeling method and a new chemical principle based on OFF-ON-OFF fluorescence switching. The regulation of intramolecular association made the probes nonfluorescent in a free state, fluorescent in a PYP-tag-bound form and nonfluorescent after protein degradation. By using one of the probes, we imaged protein expression and degradation in living cells.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (8 results)

All 2018 2017 2016

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (6 results) (of which Int'l Joint Research: 2 results,  Invited: 5 results)

  • [Journal Article] Synthetic-Molecule/Protein Hybrid Probe with Fluorogenic Switch for Live-Cell Imaging of DNA Methylation2018

    • Author(s)
      Yuichiro Hori, Norimichi Otomura, Ayuko Nishida, Miyako Nishiura, Maho Umeno, Isao Suetake, Kazuya Kikuchi
    • Journal Title

      J Am Chem Soc

      Volume: 140 Issue: 5 Pages: 1686-1690

    • DOI

      10.1021/jacs.7b09713

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Development of cyanine probes with dinitrobenzene quencher for rapid fluorogenic protein labelling2017

    • Author(s)
      Yuichiro Hori, Shinya Hirayama, Kazuya Kikuchi
    • Journal Title

      Philos Trans A Math Phys Eng Sci

      Volume: 375 Issue: 2107 Pages: 20170018-20170018

    • DOI

      10.1098/rsta.2017.0018

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Presentation] 蛋白質の分解を検出するOFF-ON-OFF型蛍光ラベル化プローブの開発2017

    • Author(s)
      堀 雄一郎、山﨑 康平、菊地 和也
    • Organizer
      日本ケミカルバイオロジー学会 第12回年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Development of Multicolor Fluorogenic Probes for Elucidating Role of GLUT4 N-Glycan in Intracellular Trafficking2017

    • Author(s)
      Yuichiro Hori, Shinya Hirayama, Zsolt Benedek, Tadashi Suzuki, Kazuya Kikuchi
    • Organizer
      2017 KSMI-FASMI joint conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 合成分子と蛋白質を駆使した生体分子イメージング2017

    • Author(s)
      堀 雄一郎
    • Organizer
      公益財団法人サントリー生命科学財団 生有研シンポジウム ユニークな生命現象の解明を目指した「新しい鍵化合物」の創製
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Chemical probes with fluorogenic switch for imaging modified protein and DNA2017

    • Author(s)
      Yuichiro Hori
    • Organizer
      ISBC 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Chemical probes with fluorogenic switches for visualizing modified protein and DNA2016

    • Author(s)
      Yuichiro Hori
    • Organizer
      BSJ-BSC Joint Symposium for Protein Design and its Applications to Biotechnology at the 54th Annual Meeting of the Biophysical Society of Japan (BSJ)
    • Place of Presentation
      Tsukuba, Japan
    • Year and Date
      2016-11-25
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Chemical probes for visualizing biological phenomena from glycobiology to epigenetics2016

    • Author(s)
      Yuichiro Hori
    • Organizer
      IPR seminar: Frontiers of peptide and glycoscience
    • Place of Presentation
      Suita, Japan
    • Year and Date
      2016-05-27
    • Related Report
      2016 Research-status Report
    • Invited

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Published: 2016-04-21   Modified: 2019-03-29  

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