• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Screening of no-coding RNA that can control transcription and chromatin

Research Project

Project/Area Number 16K14638
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Genome biology
Research InstitutionHokkaido University

Principal Investigator

Murakami Yota  北海道大学, 理学研究院, 教授 (20260622)

Co-Investigator(Renkei-kenkyūsha) TAKAHATA Shinya  北海道大学, 理学研究院, 助教 (50381588)
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsnon-coding RNA / 転写制御 / 分裂酵母 / スクリーニング / 遺伝子発現 / エピジェネティクス / 分裂区公募
Outline of Final Research Achievements

To screen non-coding RNAs that have an ability to control transcription in fission yeast, we tried to construct a screening system using structure-specific RNA binding protein MS12 that enable tether non-coding RNAs to the promoter of reporter genes. However, we gave up to use MS12, because MS2 itself shows transcription stimulation activity. We next try to utilize CRISPR-dCAS9 to tether RNAs onto the promoter. We succeeded to recruit CRISPR-dCAS9 to the target region of fission yeast genome, but its efficiency is still low. We are trying to improve the efficiency.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (3 results)

All 2017 2016

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results)

  • [Journal Article] H3K36 methylation state and associated silencing mechanisms.2017

    • Author(s)
      Suzuki S, Murakami Y, Takahata S.
    • Journal Title

      Transcription

      Volume: 8 Issue: 1 Pages: 26-31

    • DOI

      10.1080/21541264.2016.1246076

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Histone H3K36 trimethylation is essential for multiple silencing mechanism in fission yeast.2016

    • Author(s)
      Shota Suzuki, Hiroaki Kato, Yutaka Suzuki, Yuji Chikashige, Yasushi Hiraoka, Hiroshi Kimura, Koji Nagao, Chikashi Obuse, Shinya Takahata and Yota Murakami
    • Journal Title

      Nucleic Acids Research

      Volume: 44 (9) Issue: 9 Pages: 4147-4162

    • DOI

      10.1093/nar/gkw008

    • NAID

      120005819302

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Inner nuclear membrane protein Lem2 augments heterochromatin formation in response to nutritional conditions.2016

    • Author(s)
      Tange Y, Chikashige Y, Takahata S, Kawakami K, Higashi M, Mori C, Kojidani T, Hirano Y, Asakawa H, Murakami Y, Haraguchi T, Hiraoka Y.
    • Journal Title

      Genes to Cells

      Volume: 21 Issue: 8 Pages: 812-832

    • DOI

      10.1111/gtc.12385

    • NAID

      120005906898

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access

URL: 

Published: 2016-04-21   Modified: 2019-03-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi