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Genetic variations of proteasome and immune-related diseases

Research Project

Project/Area Number 16K14648
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Medical genome science
Research InstitutionThe University of Tokyo

Principal Investigator

Nitta Takeshi  東京大学, 大学院医学系研究科(医学部), 准教授 (30373343)

Research Collaborator MURO Ryunosuke  東京大学, 大学院医学系研究科, 特任研究員 (80761262)
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords遺伝子多様性 / 免疫学 / ゲノム / プロテアソーム / T細胞 / 自己免疫疾患 / ゲノム編集 / 遺伝子
Outline of Final Research Achievements

The thymoproteasome is a thymus-specific proteasome that contains a unique catalytic subunit PSMB11 and is essential for the development of CD8 T cells. Here we addressed whether genetic variations of human PSMB11 influence CD8 T cell selection and autoimmunity. By the computational analysis, we found that PSMB11 was highly enriched for nucleotide changes that interfere with protein function. The introduction of these ‘damaging’ variations of PSMB11 into mice by genome editing revealed that these variations impaired the development of CD8 T cells in vivo. One of the PSMB11 polymorphisms, G49S, altered the CD8 T cell repertoire in mice and is associated with a higher risk of an autoimmune disease in humans. Our findings suggest that proteasome variation exerts a significant influence on T cell repertoire selection and may contribute to the difference in individual susceptibility to autoimmunity.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (14 results)

All 2017 2016

All Journal Article (4 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 4 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (10 results) (of which Int'l Joint Research: 3 results,  Invited: 1 results)

  • [Journal Article] Human thymoproteasome variations influence CD8 T cell selection.2017

    • Author(s)
      Takeshi Nitta, Yuta Kochi, Ryunosuke Muro, Yoshihiko Tomofuji, Tadashi Okamura, Shigeo Murata, Harumi Suzuki, Takayuki Sumida, Kazuhiko Yamamoto, Hiroshi Takayanagi
    • Journal Title

      Science Immunology

      Volume: 2 Issue: 12 Pages: 5-165

    • DOI

      10.1126/sciimmunol.aan5165

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Osteoimmunology: The Conceptual Framework Unifying the Immune and Skeletal Systems2017

    • Author(s)
      Okamoto Kazuo、Nakashima Tomoki、Shinohara Masahiro、Negishi-Koga Takako、Komatsu Noriko、Terashima Asuka、Sawa Shinichiro、Nitta Takeshi、Takayanagi Hiroshi
    • Journal Title

      Physiological Reviews

      Volume: 97 Issue: 4 Pages: 1295-1349

    • DOI

      10.1152/physrev.00036.2016

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Identification of subepithelial mesenchymal cells that induce IgA and diversify gut microbiota.2017

    • Author(s)
      Nagashima K, Sawa S, Nitta T, Tsutsumi M, Okamura T, Penninger JM, Nakashima T, Takayanagi H
    • Journal Title

      Nature Immunology

      Volume: 印刷中 Issue: 6 Pages: 675-682

    • DOI

      10.1038/ni.3732

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] LOX Fails to Substitute for RANKL in Osteoclastogenesis2017

    • Author(s)
      Tsukasaki M, Hamada K, Okamoto K, Nagashima K, Terashima A, Komatsu N, Win S, Okamura T, Nitta T, Yasuda H, Penninger JM, Takayanagi H
    • Journal Title

      Journal of Bone and Mineral Research

      Volume: 32 Issue: 3 Pages: 434-439

    • DOI

      10.1002/jbmr.2990

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Thymoproteasome mutations impact CD8 T cell development2017

    • Author(s)
      Takeshi Nitta, Ryunosuke Muro, Harumi Suzuki, Hiroshi Takayanagi
    • Organizer
      International Kyoto T Cell Conference 2017
    • Place of Presentation
      京都大学芝蘭会館(京都府京都市)
    • Year and Date
      2017-03-13
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Human thymoproteasome variations influence CD8 T cell repertoire2017

    • Author(s)
      Takeshi Nitta, Ryunosuke Muro, Harumi Suzuki, Hiroshi Takayanagi
    • Organizer
      第46回日本免疫学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] プロテアソームの遺伝的多様性とT細胞選択・自己免疫疾患2017

    • Author(s)
      新田 剛
    • Organizer
      日本リウマチ学会 第3回ベーシックリサーチカンファレンス
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] プロテアソームの遺伝子多様性によるCD8 T細胞レパトアの変化2017

    • Author(s)
      新田 剛、高柳 広
    • Organizer
      第3回日本骨免疫学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 胸腺線維芽細胞サブセットの同定と機能解析2017

    • Author(s)
      新田 剛、高柳 広
    • Organizer
      第36回日本胸腺研究会
    • Place of Presentation
      京都大学芝蘭会館(京都府京都市)
    • Related Report
      2016 Research-status Report
  • [Presentation] Thymoproteasome mutations impact CD8 T cell immunity2016

    • Author(s)
      Takeshi Nitta, Ryunosuke Muro, Harumi Suzuki, Hiroshi Takayanagi
    • Organizer
      第45回日本免疫学会学術集会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Year and Date
      2016-12-05
    • Related Report
      2016 Research-status Report
  • [Presentation] プロテアソーム遺伝子変異によるCD8 T細胞のレパトア変容2016

    • Author(s)
      新田 剛、室龍之介、高柳 広
    • Organizer
      日本リウマチ学会ベーシックリサーチカンファレンス
    • Place of Presentation
      ステーションコンファレンス東京(東京都千代田区)
    • Year and Date
      2016-10-14
    • Related Report
      2016 Research-status Report
  • [Presentation] IL-17-producing Vγ6+ γδ T cells enhance bone fracture healing2016

    • Author(s)
      Takeshi Nitta, Takehito Ono, Kazuo Okamoto, Hiroshi Takayanagi
    • Organizer
      Gamma/Delta T Cell Conference
    • Place of Presentation
      King's College London (London, UK)
    • Year and Date
      2016-06-16
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 胸腺髄質に存在する細網線維芽細胞の機能2016

    • Author(s)
      新田 剛、新田 幸子、堤 雅紀、澤 新一郎、高柳 広
    • Organizer
      Kyoto T cell conference 2016
    • Place of Presentation
      延暦寺会館(京都府京都市)
    • Year and Date
      2016-05-20
    • Related Report
      2016 Research-status Report
  • [Presentation] Deciphering RANKL-RANK signal in mTEC development2016

    • Author(s)
      Takeshi Nitta, Masanori Tsutsumi, Shinichiro Sawa, Hiroshi Takayanagi
    • Organizer
      2016 ThymUS International Conference
    • Place of Presentation
      Wailea Beach Marriott Resort and Spa (Hawaii, USA)
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research

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Published: 2016-04-21   Modified: 2019-03-29  

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