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Application of molecular shielding effect of intrinsically disordered proteins towards development of protein stabilizers

Research Project

Project/Area Number 16K14707
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biophysics
Research InstitutionNagoya University

Principal Investigator

HIROAKI Hidekazu  名古屋大学, 創薬科学研究科, 教授 (10336589)

Co-Investigator(Renkei-kenkyūsha) IKURA Teikichi  東京医科歯科大, 難治疾患研究所, 准教授 (50251393)
HAMADA Daizo  神戸大学, 大学院工学研究科, 特命准教授 (60372132)
Research Collaborator TENNO Natsuko  
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords分子シールド効果 / 分子夾雑 / 高分子クラウディング / 朝倉・大沢理論 / 天然変性タンパク質 / アミロイド線維 / 化学シフト / アミド水素 / 温度依存性 / 凍結保護 / 凝集抑制 / アミロイド繊維形成 / タンパク質 / 生体分子 / 分子クラウディング / 選択的水和
Outline of Final Research Achievements

Macromolecular crowding is the phenomenone that alters the properties of molecules in a solution when high concentrations of macromolecules (molecular crowders) are present. In a living cell, one of the most abundant molecular crowders is the protein itself. We focus on the properties of the intrinsically disordered proteins (IDPs) as a macromolecular crowder. We recently found that IDPs have cryoprotective activity against the other proteins, and we hypothesized that this cryoprotective activity was origined by IDP's molecular shileding effect. For further understanding IDP's molecular shielding effect, aggregation inhibition of IDPs in the other conditions were examined. We found that some IDPs can suppress amyloid formation of Abeta(1-42) peptide.
We have also succeeded in developing the new method to discriminate IDPs from non-IDPs using NMR signal. In detail, chemical shift temperature coefficient (CSTC) of amide protons is a good indication.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (11 results)

All 2018 2017 2016 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results,  Acknowledgement Compliant: 1 results) Presentation (6 results) (of which Int'l Joint Research: 2 results) Book (1 results) Remarks (1 results)

  • [Journal Article] Discovery of Cryoprotective Activity in Human Genome-Derived Intrinsically Disordered Proteins2018

    • Author(s)
      Matsuo Naoki、Goda Natsuko、Shimizu Kana、Fukuchi Satoshi、Ota Motonori、Hiroaki Hidekazu
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 19 Issue: 2 Pages: 401-401

    • DOI

      10.3390/ijms19020401

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Common molecular pathogenesis of disease-related intrinsically disordered proteins revealed by NMR analysis2017

    • Author(s)
      Shigemitsu Yoshiki、Hiroaki Hidekazu
    • Journal Title

      The Journal of Biochemistry

      Volume: 163 Issue: 1 Pages: 11-18

    • DOI

      10.1093/jb/mvx056

    • NAID

      40021457337

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Common molecular pathogenesis of disease-related intrinsically disordered proteins revealed by NMR analysis2017

    • Author(s)
      Y. Shigemitsu & H. Hiroaki.
    • Journal Title

      J Biochemistry

      Volume: 印刷中

    • NAID

      40021457337

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] アミロイド線維形成を阻害するアシル化キナ酸類の合成2017

    • Author(s)
      石原健広、渡邊紀之、山田智美、尾山公一、重光佳基、天野名都子、廣明秀一、近藤忠雄、吉田久美
    • Organizer
      日本農芸化学会2017年度大会
    • Place of Presentation
      京都(ウェスティン都ホテル)
    • Year and Date
      2017-03-17
    • Related Report
      2016 Research-status Report
  • [Presentation] ヒトタンパク質由来天然変性ペプチドを用いた細胞凍結保存2017

    • Author(s)
      合田名都子、松尾直紀、廣明秀一
    • Organizer
      第17回日本蛋白質科学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ヒトタンパク質由来天然変性ペプチドが示す凍結保護作用2017

    • Author(s)
      合田名都子、松尾直紀、廣明秀一
    • Organizer
      2017年度生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 1HN Amide Temperature Coefficients: Yet Another NMR Method To Assess Intrinsically Disordered Protein Regiions2016

    • Author(s)
      岡崎寛貴、松尾直紀、天野剛志、合田名都子、福地佐斗志、太田元則、廣明秀一
    • Organizer
      The 27th International Conference on Magnetic Resonance in Biological Systems
    • Place of Presentation
      京都(国際会館)
    • Year and Date
      2016-08-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Dimer formation of amyloid beta peptides in 1,1,1,3,3,3-hexafluoro-2-propanol2016

    • Author(s)
      重光 佳基・岩谷 奈央子・合田 名都子・松崎 瑞季・天野 剛志・成田 哲博・星 美奈子・廣明 秀一
    • Organizer
      The 27th International Conference on Magnetic Resonance in Biological Systems
    • Place of Presentation
      京都(国際会館)
    • Year and Date
      2016-08-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 高分子クラウダーとしての天然変性タンパク質とその応用2016

    • Author(s)
      松尾直樹、岡崎寛貴、天野剛志、合田名都子、清水佳奈、福地佐斗志、太田元規、廣明秀一
    • Organizer
      第16回日本蛋白質科学会年会
    • Place of Presentation
      福岡(コンベンションセンター)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Research-status Report
  • [Book] Chapter 21: Protein-ligand interactions studied by NMR, in “Experimental Approaches of NMR Spectroscopy ‐ Methodology and Application to Life Science and Materials Science”2018

    • Author(s)
      Hiroaki Hidekazu、Daisuke Kohda
    • Total Pages
      20
    • Publisher
      Springer
    • ISBN
      9789811059650
    • Related Report
      2017 Annual Research Report
  • [Remarks] 医療応用を志向したタンパク質の凍結保護剤

    • URL

      http://www.aip.nagoya-u.ac.jp/unite/jp/detail/0000153.html

    • Related Report
      2017 Annual Research Report

URL: 

Published: 2016-04-21   Modified: 2020-06-01  

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