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Generation of complex and elaborate patterns with invariant cell lineages during trunk oikoplastic epidermis development of appendicularians

Research Project

Project/Area Number 16K14735
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Developmental biology
Research InstitutionOsaka University

Principal Investigator

Nishida Hiroki  大阪大学, 理学研究科, 教授 (60192689)

Co-Investigator(Kenkyū-buntansha) 小沼 健  大阪大学, 理学研究科, 助教 (30632103)
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsオタマボヤ / 尾虫類 / Oikopleura / 表皮 / パターン形成 / 細胞系譜 / ライブイメージング / 幹細胞分裂 / 胚発生 / 形態形成
Outline of Final Research Achievements

Mechanisms for morphogenetic processes that generate complex patterns in a reproducible manner remain elusive. The trunk epidermis of appendicularians, called the oikoplastic epithelium (OE), has elaborate cellular arrangements showing a complex pattern. The OE is characterized by invariant number, size, and shape of the monolayer epithelial cells. First, we subdivided the OE and defined several domains by cellular resolution, and systematically gave names to the constituent cells. Time-lapse imaging of the epidermal cells revealed region-specific pattern formation processes. Regulation of orientation, timing, and the number of rounds of cell divisions, but not cell death and migration, was a critical mechanism for determination of final cell arrangement and size. These detailed descriptions of OE patterning processes provide basic and essential information in the generation of elaborate and intricate but stereotyped cellular patterns.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (25 results)

All 2017 2016 Other

All Int'l Joint Research (2 results) Journal Article (9 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 9 results,  Open Access: 3 results,  Acknowledgement Compliant: 4 results) Presentation (12 results) (of which Int'l Joint Research: 2 results,  Invited: 3 results) Remarks (2 results)

  • [Int'l Joint Research] CNRS(フランス)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] Chinese Academy of Science(中国)

    • Related Report
      2016 Research-status Report
  • [Journal Article] Asymmetric and Unequal Cell Divisions in Ascidian Embryos2017

    • Author(s)
      Negishi Takefumi、Nishida Hiroki
    • Journal Title

      Results and Problems in Cell Differentiation

      Volume: 61 Pages: 261-284

    • DOI

      10.1007/978-3-319-53150-2_12

    • ISBN
      9783319531496, 9783319531502
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genome-wide survey of miRNAs and their evolutionary history in the ascidian, Halocynthia roretzi2017

    • Author(s)
      Wang Kai、Dantec Christelle、Lemaire Patrick、Onuma Takeshi A.、Nishida Hiroki
    • Journal Title

      BMC Genomics

      Volume: 18 Issue: 1 Pages: 314-314

    • DOI

      10.1186/s12864-017-3707-5

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Patterning and morphogenesis of the intricate but stereotyped oikoplastic epidermis of the appendicularian, Oikopleura dioica2017

    • Author(s)
      Kishi Kanae、Hayashi Momoko、Onuma Takeshi A.、Nishida Hiroki
    • Journal Title

      Developmental Biology

      Volume: 428 Issue: 1 Pages: 245-257

    • DOI

      10.1016/j.ydbio.2017.06.008

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Modified whole-mount in situ hybridisation and immunohistochemistry protocols without removal of the vitelline membrane in the appendicularian Oikopleura dioica2017

    • Author(s)
      Onuma Takeshi A.、Matsuo Masaki、Nishida Hiroki
    • Journal Title

      Development Genes and Evolution

      Volume: 227 Issue: 5 Pages: 367-374

    • DOI

      10.1007/s00427-017-0588-1

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets2017

    • Author(s)
      Brozovic Matija、Dantec Christelle、,,,,,,, Nishida Hiroki、,,,,,,, Lemaire Patrick
    • Journal Title

      Nucleic Acids Res.

      Volume: 46 Issue: D1 Pages: D718-D725

    • DOI

      10.1093/nar/gkx1108

    • NAID

      120006401706

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Internal and external morphology of adults of the appendicularian, Oikopleura dioica: an SEM study.2017

    • Author(s)
      Onuma, T. A., Isobe, M., and Nishida, H.
    • Journal Title

      Cell and Tissue Research

      Volume: 367 Issue: 2 Pages: 213-227

    • DOI

      10.1007/s00441-016-2524-5

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Eccentric position of the germinal vesicle and cortical flow during oocyte maturation specify the animal-vegetal axis of ascidian embryos.2017

    • Author(s)
      Tokuhisa, M., Muto, M., and Nishida, H.
    • Journal Title

      Development

      Volume: 144 Pages: 897-904

    • DOI

      10.1242/dev.146282

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] DNA interference-mediated screening of maternal factors in the chordate Oikopleura dioica.2017

    • Author(s)
      Omotezako, T., Matsuo, M., Onuma, T. A., and Nishida, H.
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 44226-44226

    • DOI

      10.1038/srep44226

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Redundant mechanisms are involved in suppression of default cell fates during embryonic mesenchyme and notochord induction in ascidians.2016

    • Author(s)
      Kodama, H., Miyata, Y., Kuwajima, M., Izuchi, R., Kobayashi, A., Gyoja, F., Onuma, T.A., Kumano, G., Nishida, H.
    • Journal Title

      Dev. Biol.

      Volume: 416 Issue: 1 Pages: 162-172

    • DOI

      10.1016/j.ydbio.2016.05.033

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Eccentric position of the germinal vesicle and cortical flow during oocyte maturation specify the animal-vegetal axis of ascidian embryos2017

    • Author(s)
      Masumi Tokuhisa, Miyuki Muto, Hiroki Nishida
    • Organizer
      日本発生生物学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Whole-mount in situ hybridization and immunohistochemistry procedures without removal of the vitelline membrane of embryos in the appendicularian, Oikopleura dioica2017

    • Author(s)
      Takeshi Onuma, Masaki Matsuo, Hiroki Nishida
    • Organizer
      日本発生生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Functional screening of maternal factors and analysis of metaphase arrest of meiosis in the appendicularian, Oikopleura dioica2017

    • Author(s)
      Masaki Matsuo, Tatsuya Omotezako, Takeshi Onuma, Hiroki Nishida
    • Organizer
      日本発生生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] オタマボヤにおける2 細胞期から開始する左右非対称な発生過程2017

    • Author(s)
      小沼健,林桃子,岸香苗,西田宏記
    • Organizer
      日本動物学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 神経胚回転によるマボヤの左右非対称性の決定には繊毛が関与している2017

    • Author(s)
      田中 佑佳,山田 詩織,西田 宏記
    • Organizer
      日本動物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 18SrRNA 遺伝子並びにミトコンドリアゲノムに基づくオタマボヤ綱の分子系統解析2017

    • Author(s)
      横堀 伸一,笠原 享祐,大塚 玄航,西野 敦雄,小沼 健,西田 宏記,山岸 明彦
    • Organizer
      日本動物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Eccentric position of the germinal vesicle and cortical flow during oocyte maturation specify the animal-vegetal axis of ascidian embryos2017

    • Author(s)
      Nishida H, Tokuhisa M, Muto M
    • Organizer
      国際発生生物学会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Patterning and morphogenesis of the intricate but stereotyped Oikoplastic epidermis of the appendicularian, Oikopleura dioica2017

    • Author(s)
      Kanae Kishi, Momoko Hayashi, Takeshi A. Onuma, and Hiroki Nishida
    • Organizer
      9th International Tunicate Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Novel approaches targeting for maternal factors in the appendicularian, Oikopleura dioica2016

    • Author(s)
      Takeshi A Onuma, Masaki Matsuo, Tatsuya Omotezako, Hiroki Nishida
    • Organizer
      日本動物学会
    • Place of Presentation
      沖縄コンベンションセンター(宜野湾)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Research-status Report
  • [Presentation] Embryonic axis specification in ascidian embryos: oocyte to tadpole2016

    • Author(s)
      Hiroki Nishida
    • Organizer
      日本動物学会
    • Place of Presentation
      沖縄コンベンションセンター(宜野湾)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Morphogenesis and patterning of the trunk epidermis of the appendicularian, Oikopleura dioica2016

    • Author(s)
      Kanae Kishi, Momoko Hayashi, Takeshi Onuma, Hiroki Nishida
    • Organizer
      日本動物学会
    • Place of Presentation
      沖縄コンベンションセンター(宜野湾)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Research-status Report
  • [Presentation] DNAi screening for maternal factors that are involved in embryogenesis of the appendicularian, Oikopleura dioica.2016

    • Author(s)
      Masaki Matsuo○, Tatsuya Omotezako, Takeshi A. Onuma, Hiroki Nishida
    • Organizer
      日本動物学会
    • Place of Presentation
      沖縄コンベンションセンター(宜野湾)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Research-status Report
  • [Remarks] 研修室ホームページ

    • URL

      http://www.bio.sci.osaka-u.ac.jp/bio_web/lab_page/nishida/index.html

    • Related Report
      2017 Annual Research Report
  • [Remarks] Hiroki NISHIDA's Laboratoty

    • URL

      http://www.bio.sci.osaka-u.ac.jp/bio_web/lab_page/nishida/index.html

    • Related Report
      2016 Research-status Report

URL: 

Published: 2016-04-21   Modified: 2019-03-29  

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